Cottoperca gobio: 115008667
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Entry
115008667 CDS
T07513
Symbol
dchs2
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-23
KO
K16507
protocadherin-16/23
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115008667 (dchs2)
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Cadherin related
115008667 (dchs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
RET_CLD1
CADH_Y-type_LIR
PepSY
SpaA_4
Motif
Other DBs
NCBI-GeneID:
115008667
NCBI-ProteinID:
XP_029288257
UniProt:
A0A6J2PT52
LinkDB
All DBs
Position
1:6454340..6483229
Genome browser
AA seq
3274 aa
AA seq
DB search
MWKGAMGRKKAATSLLRTLVLSLLCAQSLGQVFNLTLSVKEGLPAKTIIGDLGAGLRRPS
TGFFISESRDSYVFRDLEIDADTGIISTAVILDRENTDKYEFVAATLTGEMIKVYLEVKD
VNDHSPVFPSEEVDLEISELSPPGSQFQLVVAKDEDEGEFGTQGYRITESEMGELFYLEY
RGGSENHPSLNLILTSKLDRETQDFYSLAIEAFDGGIPVRTGTLQVNIRVLDENDNPPIF
NQTEYHASLPENAPLMSAVCQVHATDLDLGDNGRITYEINRRQSDPNEIFSINETSGVVY
LNKPLDYETQAFHELIISARDNGAQPEYSSAFVGVNVLNINDNSPSISVLFLSETGDAVV
SEAAAIGDYVARISVSDPDFKEESVTVTLQEDDGKFTLKQTDDYLYALCVNAELDREEND
LYELKVQASDFGSPPLSSEMVLLLRVSDTNDCHPVFEKDVYIIGVSEDAPQGSSLIQMRA
RDADEGVNSEVRYSILKSNQDSLLSIDPESGLVTTAAALDRETQMEVWFLVVASDGGEPA
LSSTATVTVLVEDVNDNEPVFQQQLYNVSIPEHSDVGSCFLQVVATDADSPEFGTLLYSL
SDGFDMQDKHPLFKIHPQTGELCVSQDIDRDSGHTVHDILIKAEDPGGLSAQTYVHIEVE
DLNNNAPVFNPDEYTMSISSHTQPGTEILNVIATDRDSGSFGHVTYDILPGDMSSLFALD
KQTGMLLLTSTLTHLGAASVKLSITAQDGEGLTSVRPAEVTINVLRSAQAPAVFQRSRYT
FTVPEDAPSATAVGTVEAINPADSESVSYRISSGDPQGLFSVHPKSGLISNIKHLDHESQ
PYALLVLQSFTDTSPVYSTTQVNITIADINDNAPVFPKLSDTITVSQNTLPGTVLFIAHA
HDDDSGANGRVRYHLKSTRNGTFVVDHNLGTVTLNQSLQADHQQRYGLEIVAKDEGEPSL
ISTLSLTVNVDRTAAEHSLAFETLVYQVEIGEGYRKDSRVIQVRAHRSRGAHLSNSGLHY
SLEAEAGFPPAPFRIHPKTGWLYLSLNLDYETESMFRFRVLATAREASLANMTATATVIV
LVLDINDNPPVFSSEVYYFTVSEGSSPQGLVGTVKAVDKDSGKNAQLSYILLTDGKFFRI
NAKTGEIINWVALDREQHSQHRLKVMVTDQGHPRFNATASAHILVTDINDNTPQFTHLPA
SKELNVQIWAGLPAGSLVTNMFAKDLDAAENGTVTFSLATADLEDAGFGHFEVDSESGDI
RTTEIFTQNAEPYYTLRVRAKDSGASPLEDTAVIHVQVHGLEALYGRSDHQIMRCFTVKE
NTEPATVIGSAGVSYKGRFHYSISEGDGSVHFGIDGSSGDIYINQPLDYESAVQYLLMIR
AEDVGLAPGVNMSVLVSVMVEDVNDHTPWFLDKLVMFGLWEDAAVGSLAFAFHARDADGT
LPNSALRYSLSFDSQLSRSSSRFPFQINPHTGSLTVTAPLDRETNPSYAFTVTATDQAKR
KDERKQTSVTAQVFLLDVNDNRPVFVSADTVQVMEDAEVRSLLHHFVAIDGDQGENGVVS
YVIIGGNKKGFFTLEEETGLLFLSAPLDYETLRFHRLTVRAVDHGLPSLSSTQTLTVEVG
DVNDQIPVFSQSIYNASVAENRDPGEPVIRVSASDKDSEENAVVWYSLLPGHGYELFGIN
PYTGLITTTSYLDREQQHHFTLRVQARDSSTRPLSGTATVLCSVLDDNDNPPEFMQSSFQ
ISLPENLSPGVVHTAQASDPDHGENGTIHYSILGEDYRGRFTINSHTGAVSTTRVLDREE
RQNYTLTIQAHDYGPTQLSSTTQLQLVLLDQNDNIPSFTRKSYHASISEGLPLGAEILRV
SAFDPDEGSNGDLTYSLTEDNSQGTFSVDAFTGVIRTTRSLDRESRAQYTLRAVATDGCA
QGPLSSVASVTIQVEDVNDNVPLCEQNPINAWVSMRTLPNQIVTTLLASDGDQGDNGTIQ
FMLSDEENLFDINSESGEISLRRRVRAGFSGRKLQVVVSDQGEPALTSTCLVFIHLKGEH
EGLQFTNKVYNATVKENSRAGTWIAKVEASDQTNSRQRVTYNIFSGNENYIFSINRHTGE
IRVQKDNSLDFEVSPKMQLVVLADNGLQTAHCRVSINLLDVNDNAPVFEHGNYRTAVWEG
QVHNTYIMQVFASDADSGMNGLIEYSIVSGNPNEAFVLDSVRGILATNVMLDREIAPSYK
LVLQAADRGNPPLSSTTTIRVQVVDVNDNSPTIPPMEPVVIAENLPAGYMVTQVTANDVD
LSSTITFSFADNSSTNVPFAIDRYTGVVTLTRALDYEEQTEYMLTVWASDSLHQTTGEVK
VQVLDVNDNAPVFAKVSYQVELSELVSADTLVLSVSATDRDSGLNGKITYRLLSSPLQGF
YIEPDKGSVFTNKPLKAITNSNLIHLLVEAKDEGDPVQSTVTSIDVLILDTNDHTPLFHQ
DIYTLTVPEDTPTDTTLLTLSAEDQDWSPENTYLDYSIIRGNEEKRFCLEVKMVQLESQM
RNVGKLVLCNPLDRETTESYALTVSVSDRGTPPLNSTAVIMVTVTDCNDNAPVFSSTGYH
AQVSENSHVGTRLVQVNAQDPDLGTNGVLRYDIISGNSKGHLKLNPQSGLLVVNHSLDYE
EDSKYTLTIRASDGGESFEERKVAFTVVFITVLDVNDNTPYFLFTTVNCSVLENLPVFTH
TCSVHAVDNDLGTYGQLTYSVVSSCFMDYGSGSPEKKQAFAIDPLTGDIHTRQTFDYERE
SEYCFVVEARDKGDKAATVRVQVTIKGVDEFSPVFTQKRYQFLLPENAQLGETVGYVMAM
DHDGGVDGLVEYSLIKSSPFFSINKTIGAIFVSGPVYRRRGSHAHEDMIELVVSAGSPRL
TSRTTACIVFVNISSSAEALTGVPLDAHMLSLSVSLIMFLLVLLLFVGLVLRYKIKEAAI
KKATAIAVNLNNGTGSFGRSIGQSAISLQEIKRPIILVTQRDISNPYNQSDSSGRGSAEG
ETAEDQEIKWINQYPCRKRDKSVPGNQAIEIPDSALPEDNISCHSIDVGPEHILSVNKRL
ISGMASTESLYHFKEEGGGEGLLPAILRVRDLEDSMKTNGYAPLSEAHASADSLSSLLCL
EEELQGSYSWDYILDWEPRFQNLASVFTDIGMLPDEELQGGREDLAAEASCLMYPPPLIT
GVAQPGIRTVPPRKPGRIPSLRRKRSYRKYVYSPLARNTGLTPSAMTPTFSPSLSSLTIR
TPSASPVVSETGVGGIRLDSGPLTASLLEAEIQV
NT seq
9825 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaggagcaatgggtcgcaaaaaagccgcaacttcgctccttcggacgctcgtg
ctgtcgctgctttgcgcgcagtcgctcggacaggtattcaacctgacgctgtctgttaaa
gagggcttgcctgctaaaaccatcattggagatctgggagcggggttaaggaggccaagc
actggattcttcatctcagagagcagagactcttatgtgttcagagacttagaaatagac
gcagacacggggatcatctccacagccgtgatcctggacagagagaacacagataagtat
gagtttgtggcagctaccctgacaggagagatgatcaaagtgtacctagaggtgaaagat
gtgaacgaccactcacctgtgtttccctcagaggaggttgacttggaaatatcagaactg
agcccccctgggagtcaatttcaacttgtagttgctaaagatgaggatgaaggtgagttt
ggtacccagggatacaggatcacagagagtgagatgggggagttattctacctggagtat
cgcggtggatctgagaaccacccgagcctgaatctcatcctcaccagcaaactagacaga
gaaacgcaggacttctactccctcgccattgaggccttcgatggcggcatcccagtcagg
acgggcactcttcaggtgaacatccgcgtcttggatgagaacgacaacccgcccatattc
aaccagactgaataccacgcctcgctgccagagaatgctccgctgatgtctgcagtgtgt
caggtccacgccactgacctcgacctgggcgacaacggcagaatcacttatgagatcaac
aggcggcagagtgacccgaatgagattttctccatcaacgaaaccagtggggtggtgtat
ctcaacaagccgctcgactatgagactcaggcttttcatgagttgatcatcagcgcgagg
gataacggggctcaacctgaatacagcagcgcttttgtgggtgtgaatgtgctaaatatc
aacgataacagtcccagcatcagtgtgctgtttctcagcgagacaggagacgcagtggtt
tcagaggcagcagcgatcggggactatgtggcccggatttcagtgtcagaccccgacttt
aaggaggagagcgtcaccgtcacgcttcaggaggatgatgggaagttcaccctgaagcag
acagacgattatctgtacgctttgtgtgtcaatgcagagctagacagggaagagaatgat
ctgtatgagttaaaggtgcaagcatcagattttgggagcccacctctgagtagtgagatg
gtcctcctcctgagggtatctgacaccaatgattgccacccagtttttgagaaggatgtg
tacatcatcggcgtttcagaggacgctcctcaggggagttcgctcatccagatgcgggcc
cgagacgcagatgagggcgtcaactcagaggtcagatactccatcctgaagtccaaccag
gacagcctgctcagcattgacccggagtcaggcctggtcacaacagctgcagctctggac
agagagacacagatggaggtttggttcctggtggtggcgtctgatggaggggaaccggct
ctgtcatccacggctacagtcaccgtgctggtggaggacgtcaatgacaacgagcctgtg
tttcagcagcagctgtacaacgtgtccataccagagcacagtgacgttgggagctgcttt
ttacaagttgtcgccacagacgcagacagccctgagtttggcacgctgctctactctctg
tctgacggctttgacatgcaggacaaacaccctctcttcaaaatccacccgcagactgga
gagctgtgcgtctctcaggatattgatcgagactcggggcatacggtccacgacattctg
atcaaagctgaagatccaggaggcctgagcgcacaaacctatgtgcacatcgaggtggaa
gacctgaacaacaacgctccagtgtttaaccctgacgagtacacgatgagcatcagcagc
cacacacagcccggcacagaaatcctcaacgtcatcgccaccgacagagattctggcagc
ttcgggcacgtcacctacgatatccttcctggtgacatgtccagtttgttcgcactggat
aaacaaacaggaatgctcctcctgacctccactctcacccacctgggtgcagccagtgtg
aagctctcaataacagcgcaggatggggagggcttgacctcagtcaggcctgcagaggtc
accatcaatgttctgcgcagcgcccaggctccagctgtgttccagaggtcgcgctacacc
tttacagtgcctgaggacgcaccgtcagcgactgctgtggggacagtggaggccataaac
ccagcagactcagaatcagtctcctaccgaatctcctctggagaccctcaaggtttgttc
tccgttcacccgaagtccggcctgatcagtaacatcaaacatctggaccacgagtcgcag
ccgtacgccctgctggttcttcagtccttcaccgacacctctccagtttacagcaccaca
caggtcaacattactatcgctgacattaatgacaacgctcctgttttccccaaactcagc
gacaccatcacagtgtctcaaaacacgctcccagggacagtgttgtttatcgctcatgca
cacgacgatgacagtggtgccaacgggagggtacggtatcacctgaaaagtaccagaaat
ggtacgtttgttgtcgaccacaacctcgggacagttacgttaaatcagagtttacaggcg
gatcatcagcagaggtacggtctggaaatcgtggctaaagatgaaggagaaccttccctg
atctctaccctgagcctcacagtcaatgtggaccgcaccgctgccgaacacagcctcgcc
ttcgagacgttagtctaccaggtggagatcggggagggctacaggaaagattcaagggtc
atccaggtgagggcgcaccggagccgaggagctcacctgtcgaactcaggcctccattac
tccttggaggcagaagccggatttcctcctgctccgtttcggattcacccaaagaccgga
tggctgtatctctcccttaatctcgactatgagacagaatccatgtttcgttttcgagtg
ttggccacagccagggaggcctcgctggcgaacatgacagctacagccacagtgatcgtg
ctggtgctggacatcaatgacaatcccccggtgttcagcagcgaggtctactacttcact
gtgtcagaggggtcgtcgcctcaaggcctggtgggaacagtcaaagccgtggataaggat
tctgggaaaaacgcccagctgtcctacatcctgctcacggacgggaagttctttcgcatc
aacgctaaaacaggtgaaattatcaactgggtggcgttggaccgggagcagcacagtcag
caccgtctgaaggtgatggtgacagatcagggccaccctcgtttcaatgccaccgccagc
gctcacatcctggtcactgacatcaacgataacacgccacagtttacacacctgccggcc
agcaaggagcttaacgttcagatatgggccggtctaccagcaggatccttggtgacaaac
atgttcgccaaagatttagatgcggcagaaaatggaacagtcaccttctcattggccaca
gctgatttagaggatgcgggttttggacactttgaggttgacagtgaaagcggagacatc
cgaaccacggagatttttacccagaacgccgaaccgtactacactctgagagtacgagcc
aaggacagcggagcctcaccgctggaggacactgcggtcattcatgtacaggttcatgga
ctagaggctctgtacggccgctctgaccaccaaattatgaggtgttttacggtgaaagag
aacacggagccagcgactgtcatcggttctgccggtgtttcatataaagggagattccat
tattccatctccgagggcgatgggagcgttcacttcggcatcgacggctcctctggtgac
atatacatcaaccagccgctggactacgagtctgccgtgcagtacttgctcatgatccga
gctgaagatgtaggactcgctcccggagtgaacatgtctgtgctggtcagtgtgatggtg
gaggatgtaaacgaccacacgccctggttcctcgacaaactggtgatgttcggcctgtgg
gaggacgctgcggtcgggtcgctggcgtttgcttttcatgccagggatgctgatgggacc
ttgccgaacagtgccctccgctactccctgagctttgactctcaactcagcaggtcttca
tcacgcttcccctttcagatcaaccctcacacggggagcctgactgtaacagcgccttta
gaccgcgagaccaaccccagctatgctttcactgtgacagccaccgaccaggcgaagagg
aaggacgagcggaaacagacgtcagtgacggctcaggtgttcctgctggatgtgaatgat
aaccggccggtgtttgtatcagcggacacagttcaggtgatggaggatgcagaagtgagg
agtctgctgcatcattttgtggccatagatggagatcagggtgaaaacggggtcgtgtcc
tacgtcatcattggaggaaataagaaaggattcttcacactggaggaggaaacaggcctc
ttgtttctctcggcccctctggactatgagacactacgtttccaccgtctgaccgtccgt
gcagtcgaccacggcctgccctcgctctcctccacccagactctgacagtggaggtcggg
gatgtgaacgaccagatacctgtcttcagtcagagcatctacaacgccagtgtggccgag
aacagagaccctggagaaccagtgatcagggtctctgcctctgacaaagattcagaggag
aatgcagtggtgtggtacagcctgttgcccggccacggctacgagcttttcggcatcaac
ccttacaccggtctgatcaccaccacctcctacctggacagagagcagcagcatcacttc
actctcagagtccaggctcgggacagcagcacacggcctctgtcgggcacggccacagtg
ctgtgctctgtgctggatgacaatgacaaccctccggagttcatgcagtcatccttccag
atcagtctgccagaaaacctgtctcccggcgtggtccacacggctcaggcctctgatccc
gaccacggggaaaatggaactatacactactccattttaggtgaggactacagaggtcgc
ttcaccatcaacagccacacaggtgcagtcagcaccacgcgggtccttgaccgcgaggaa
aggcagaattacaccctcaccatacaggcccatgactatggccccacccagctcagctcc
accacccaactccagctggtgctgctggaccagaatgataacatcccctccttcacccgt
aagagctaccacgcctccatcagcgagggcttacctctaggagcggagatcctgcgtgtt
agcgcgttcgatcccgacgaggggtccaacggggacctcacctactctctgacagaggac
aacagccaggggactttctcagtggacgcgttcacaggagtgatacgcaccacgaggtct
ctggacagagagagccgggctcagtacaccctcagagctgtggctactgacggctgcgct
caaggcccgctgagctctgtggcatcagtgaccatacaggtggaggacgtgaacgacaat
gtgcctctctgtgagcagaatcccatcaacgcatgggtttctatgaggactctaccaaac
cagatagttaccacgttgttggcatcagatggtgaccagggtgacaatgggactatacag
tttatgttgtctgatgaggaaaacctgtttgacatcaacagcgagtccggagagatttca
ctgagaaggcgagtgagagccggtttctccgggaggaagctgcaggttgtggtttcagac
caaggagaacccgctttaacctccacctgcctggtttttatccatctgaagggagaacac
gaagggctacagttcacaaacaaagtgtacaatgctaccgtcaaggagaacagtagagct
ggcacttggattgccaaagtggaggccagtgaccaaaccaatagcagacaaagggtcaca
tacaacatatttagtggcaacgagaattatattttctccatcaaccgccacacaggtgag
atccgtgtgcagaaagataactctctggactttgaggtgagccctaagatgcaactggtg
gtgctggctgacaatgggctgcagacagctcactgcagggtctccatcaacctgctggat
gtgaatgacaatgcaccagtctttgagcacggcaactacagaacagctgtctgggaggga
caagtgcacaacacttacatcatgcaggtgtttgcatctgatgctgacagcgggatgaac
gggctgattgagtactccatcgtgtccggtaaccctaacgaagcattcgtcttggactct
gttcgtgggattcttgctaccaatgttatgctggaccgtgagatcgccccctcatacaag
ctggtcctgcaggcagcagacaggggaaaccctccgctcagcagcaccaccaccatcagg
gtccaagtggtggacgtcaatgacaacagccctaccatcccccccatggagcctgttgtt
atagcagagaatctgccagcagggtacatggtcacccaggtgactgcgaatgatgtggac
ctgagctcaaccatcaccttcagctttgcagacaacagtagcaccaatgttccctttgct
atcgaccgatatactggtgtggtcaccctgactcgagccctggactatgaggagcagaca
gagtacatgttgacagtctgggcctctgattccctccaccagaccactggagaggtcaaa
gttcaagtgcttgacgtcaatgataacgctccagtcttcgccaaggtttcctaccaggtg
gagttgtcagaattagtttcagcagacacgttagttttgtcagtgtccgctaccgacaga
gactctggacttaatgggaagatcacctacagactgctttcatctcctttacaaggcttt
tacatcgagccagacaaagggtctgttttcaccaataagcccttgaaggcaatcacaaac
agcaacctgatccatcttctggttgaggccaaagacgaaggcgatcctgtgcagtctact
gtcacctccatagatgtgcttattctggacaccaacgaccatacacctttgttccaccag
gacatctatacgctcaccgtcccagaggacacgcccacagacaccaccctactgacgctg
tctgcagaggaccaagattggagccctgaaaacacctatttggactactccatcatcagg
ggaaatgaggagaagcgattctgtctggaagtaaaaatggttcagcttgagagtcagatg
agaaatgtaggaaaacttgttctatgtaaccctttagaccgtgagacaacggagagctac
gcactaacagtgagcgtgtctgatcgaggaacacctccactgaacagcactgctgtcatt
atggtgactgtgacagactgcaatgacaatgcccccgtcttttccagcacaggataccat
gcacaggtgagtgaaaacagccatgtaggtaccagactggtccaggtcaatgctcaggat
cctgatctgggaactaatggcgtgttgcggtacgacattatctcggggaacagcaaaggc
cacctcaagctcaaccctcagtctggccttctggtggtcaaccactcccttgactatgag
gaagactcaaaatacaccctcaccatccgagcatctgatggtggtgaatcatttgaagaa
cgtaaagtggcttttacagtggtcttcatcacagtgttggatgtaaatgacaacactcct
tacttcttgttcactactgttaactgttctgtgctggagaaccttccagtgtttacccac
acctgttctgtccatgctgttgacaatgacttaggcacctacggtcagctcacctactct
gttgtgtcctcctgcttcatggactatggcagtggcagccctgagaagaagcaggccttt
gccatcgaccccctaacaggcgacattcacaccagacagacctttgattacgaacgagag
agtgagtactgctttgtcgtggaggccagagacaaaggcgacaaagcagctacagtgaga
gtgcaggtgaccatcaagggagtggatgagttcagtcccgtcttcacccaaaagcgttac
caattccttctgccagaaaacgcccagcttggagagacagtcggttacgtgatggcgatg
gaccatgatggaggggtagacgggctggtggagtactcccttataaagtcctcgccgttt
ttctcaataaacaaaacaattggtgccatttttgtgtcaggtcctgtatatcgcagaaga
ggcagccatgcccatgaggacatgatcgagctggtggtgtctgcaggtagtcccagattg
acctccaggaccactgcctgcatagttttcgtcaatatctccagctcagcagaggcactc
accggggtgcctcttgatgcacacatgctcagtttgagtgtctcactaatcatgttcctc
cttgtcctcctcctttttgtgggcttagttctcaggtacaagatcaaggaagcggcaatc
aaaaaggctactgccattgccgtcaacttgaacaacggcacaggctcgttcggtagatcc
attggccaaagtgccatctctctgcaggagattaaacggcccatcatcttggtgacccag
agggacatatcaaacccatacaatcagtcagactcgagcggccgtggatcagcagaaggt
gagacagctgaggaccaggagatcaagtggattaatcagtacccctgccgtaaaagagac
aaatctgtgccaggaaaccaggccatcgagataccagactctgctttaccagaggacaat
atctcctgccactctatcgatgtagggccagagcacattttatctgtaaataaacgttta
atctcagggatggccagcacagaaagcctctaccacttcaaagaggaggggggaggtgag
ggactacttcctgccatacttagggtgagggatttggaggatagtatgaagacaaatggg
tacgctccgctctcagaagcccatgcctctgcagattctctctcttcacttctatgtcta
gaggaggaactgcagggcagctacagctgggactacattttggactgggagccacgcttc
cagaatctggcctcggttttcaccgatattgggatgcttcctgatgaggagcttcaaggt
ggccgtgaggacttagcagcagaggcaagctgtctcatgtacccaccgcctcttataaca
ggagtggctcagcctggtattaggactgtacctccacgaaagccagggcgtataccaagc
ctgagaaggaagcgctcttatcgcaaatatgtgtattcccctttagccaggaacacagga
cttaccccttcagccatgacgcctactttttccccatcattgtcttctctcaccattagg
acccccagtgcctcaccagttgtttctgagactggggttgggggtatcagacttgactca
gggcccctcactgcaagcctattggaggcagaaatccaggtgtag
DBGET
integrated database retrieval system
