Cottoperca gobio: 115008708
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Entry
115008708 CDS
T07513
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115008708 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115008708 (smarcd1)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115008708 (smarcd1)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115008708 (smarcd1)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115008708 (smarcd1)
PBAF complex
115008708 (smarcd1)
GBAF(ncBAF) complex
115008708 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
115008708
NCBI-ProteinID:
XP_029288320
Ensembl:
ENSCGOG00000021430
UniProt:
A0A6J2PRW9
LinkDB
All DBs
Position
5:22260640..22275803
Genome browser
AA seq
514 aa
AA seq
DB search
MAARGGFQSAPTGGVVGAMGPGPPVPGAGPGMGPGTPSGRMVPSSAVQNHMYRSPMPGPG
YPRPGMPPSNRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELETALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcggcaccgacgggaggtgttgttggagcaatggga
cctggaccaccggtaccgggtgcaggaccaggcatgggccccgggactccttctggaagg
atggtaccgtcgtcggccgtgcagaaccacatgtaccgctccccgatgcccgggcctggg
tacccgagaccaggcatgcctccatccaaccgcatgaccccgcagggaccagccatgggc
cccccaggatatggcaacagccctgtgtctcgccctgtgatgcctggcgtgatggacccg
tctcgcaagaggcccgccccccaacagatccagcaggttcagcagcagaaccgcaaccag
catacaaagaagaagaagatggccgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggcttttgagaggaagctggatcagaccatc
atgcgcaagaggctggacattcaggaagccctcaagaggcccattaagcaaaagagaaag
cttcggatcttcatatcaaacaccttcaaccctgcgaagccagatgctgaagatggagaa
ggcacagttgcatcatgggagctacgtgtagaggggcgtctgctggaagatacggccgtg
tccaagtatgaagccaccaaacagaagaggaagttctcctctttcttcaagtctctggtg
atcgagttggacaaagacctctatggtccagataatcaccttgtagaatggcacaggact
gccaccacccaggagaccgatggtttccaggtgaagaggcccggtgatgttggagttcgc
tgcaccgtcctgctcatgctcgactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctggggatccacacccagaccagacctgtcatcattcaggccctgtggcag
tacgtcaagacccacaaactccaagaccctcatgagcgcgagttcatcaactgtgacaag
tacctgcagcagatatttgagactcagcgaatgaagttctctgagatcccacagcgcctg
catgcactcctgatgcccccagagccaatcatcatcaaccatgtgatcagtgtggatcct
aatgaccaaaaaaagactgcttgctatgacattgatgtggaggtggacgacacgctgaag
acccagatgaactctttcctgctctccacagccagtcagcaggaaatagcaggactggac
aacaagatccatgaaaccattgagaccattaaccagctgaagacccagagagagttcatg
ttgagttttgccagagatccccagggcttcatcaacgactggctgcagtcccagtgcaga
gacctcaagaccatgacagatgtggtcggaaacccagaagaagagcggagagcagagttt
tactaccagccgtgggctcaggaggcggtctgtcgctacttctactccaaggttcagcag
aggcgacaggagctggagacggcgctcggcatcaggaacacctaa
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integrated database retrieval system
