Cottoperca gobio: 115008732
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Entry
115008732 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
cgob
Cottoperca gobio
Pathway
cgob03266
Virion - Herpesvirus
cgob04145
Phagosome
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04517
IgSF CAM signaling
cgob04518
Integrin signaling
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
cgob05100
Bacterial invasion of epithelial cells
cgob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115008732
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115008732
04517 IgSF CAM signaling
115008732
04518 Integrin signaling
115008732
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115008732
09144 Cellular community - eukaryotes
04510 Focal adhesion
115008732
09142 Cell motility
04820 Cytoskeleton in muscle cells
115008732
04810 Regulation of actin cytoskeleton
115008732
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115008732
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
115008732
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115008732
04515 Cell adhesion molecules [BR:
cgob04515
]
115008732
04090 CD molecules [BR:
cgob04090
]
115008732
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115008732
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin alpha subunits
115008732
CD molecules [BR:
cgob04090
]
Proteins
115008732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115008732
NCBI-ProteinID:
XP_029288364
Ensembl:
ENSCGOG00000011066
UniProt:
A0A6J2PSQ6
LinkDB
All DBs
Position
5:4214141..4271763
Genome browser
AA seq
1054 aa
AA seq
DB search
MGTVPGLSPTRSWGKCCHYAVLVVPVVAVLVQLGAAFNLDTDKRVVFTGQRGSYFGYSVE
FFSNSSSISVLIGAPKANTSQPDITEGGAVYLCPWTQANCSMINFDKQGDRYFYINDVNT
QVEFKSHQWFGATVRSHGNSILACAPRYYWRTEHDEPFADVTGTCYLSVDSLKTFVEYAP
CRTERHGPVGQGFCQGGFSADFTKDGKVVLGGPGSFYWQGQLISATTEEIVKAYYPSYFL
LSVAGQIQTRQVQGNYDDSYLGYSVAGGEFSGDDEEDFITGVPKGLMLYGVVSILNGRDL
KSLLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPMFMRRGFNGRLEELGKVYVYLQR
GPLLLEPSQSHLLGKQAFSRFGTSLAPLGDLNQDGFNDMAIGCPYGGEEQHGLVLIYNGC
AGGLMETPTQTLSGQWASSSFPASFGFSLRGNRDLDQNGYPDLIVGAFGIDKAVLYRARP
IVSASASLTVQPTMLNHEEKTCELITGNETVAVSCVSIGFCLLTNGKHLPSHLGFVVEVQ
LDSVKQNQKESIRRTLFLDSQQPSLLKTISLANGERLCHDTKIYLRGEEEFRDKLSPIFI
SLNFSLDAHAPVDQHGLRPILNYETEQRIQQKAQIQLDCGEDNICVPDLKLAVYGDRAEV
YLGDENSLSLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNVSLTQLTCSYEAENQT
RYLVCDLGNPMKSGTSLWAGLRFTVPRLKDTHNTVQFELQIRSKNANNSESEVVLFELEV
AAVADVILQGVSRPDKVIFPPPNWKVSQSLREEQDIGPELQQVYELVNNGPSVVSLSTLE
VRCPLRAHGHELLYPVEVVTEGPLSCSSKHTFNALKLKLQPAAAQGPTSLISSPEHHIRR
REVYRDLLSEQGNLTCSTVECWQLQCDVGLLERGASVILMLRSRLWAETFIERVYKQYVL
ECSVQYKVDKMPYSIPPKFKPLGSKKVVIAVMWNKPETPFPVPVWIIILAILAGLLLLSL
LIYLLYKMGFFKRSDPYGTTMEKAQLKPQASSEA
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgttcctggactttcacctacccggtcatggggaaaatgttgtcattacgcc
gtgttggttgtacctgtagtggcggttttggtgcagcttggcgctgcttttaacttggac
acggacaaacgcgtcgttttcaccggacagcggggaagttattttgggtattcagtggag
ttcttcagcaactcatccagtatcagtgttttgatcggcgccccgaaagccaacaccagc
cagcccgacatcactgaaggaggagccgtgtacttgtgcccctggacccaagctaactgc
agcatgatcaactttgacaagcaaggtgatcgatatttttatataaacgatgtgaacact
caggttgagttcaagtcccaccagtggtttggagctactgtgcgttcccatggaaacagc
atcctggcttgtgctcccaggtattactggaggactgaacatgacgaaccctttgcagat
gtcacaggaacctgctacctctctgtagacagtctcaaaacctttgtggagtatgccccg
tgccgaacagaaagacatggacctgttggacagggcttttgtcaagggggattcagcgca
gacttcaccaaggatgggaaggttgtgcttggaggaccaggcagcttttactggcaaggc
cagctgatctcagccaccacagaggagattgttaaggcttactacccgtcttactttctg
ctgtcagtcgccgggcagattcagacacgacaggtgcaggggaactacgatgacagttac
ctgggttactctgtggctggtggcgagttcagtggggatgatgaggaagatttcatcaca
ggagttccaaaaggactcatgctgtatggtgtagtgtccatattaaatggaagggatctg
aagtctctgctcaacttgacaggggagcagatggggtcctacttcggctacgcagtggca
gccaccgacatcaacaacgatggtttggatgacctggtggtgggagctccaatgttcatg
cgtcgagggttcaatgggcgtctggaggagctgggtaaagtgtacgtgtacctccagaga
ggccctctgctgctggagccaagccagtcccatctcctgggtaaacaggcctttagccgc
ttcggcacctcgctggctccgctgggagatctcaaccaggatggattcaacgacatggcc
attggctgtccctatggaggagaggagcagcacggattggttctcatttataatggctgt
gccggaggactgatggaaacgcccactcagactctctctggccaatgggcttccagctct
ttcccagccagttttggcttttccctgcgaggaaacagggatctggatcaaaacggctat
ccagatctgattgttggtgcttttgggattgataaagcagtgctatacagggctcggcca
atagtgagcgccagtgcgtctcttacagtgcagccgaccatgctcaaccacgaggagaag
acttgtgagctgatcacagggaatgaaaccgttgctgtgtcttgtgtcagcattggtttc
tgcctgctgactaatgggaagcacctcccctctcatctaggctttgtggtggaggttcag
ttggacagtgtgaagcagaaccagaaggagtccatcaggaggactctgttcctggacagc
cagcagcccagtctgctgaagaccatcagcctcgcaaacggagaacgcctgtgccatgac
accaagatctatctgcggggtgaagaggagtttcgggacaaactctctcctattttcatc
agcctgaacttcagtctggatgctcatgccccagtggaccagcatggcctcagaccaatc
ctgaattatgagacagaacagcgtatacagcagaaggcccagattcaactggattgtgga
gaggacaacatctgcgtccctgacctcaagctggctgtttatggtgacagagcagaggtt
tacctgggagacgaaaactccttgagcctgacattcaatgccaggaacgagggagaggga
ggggcgtacgaggccgagctctatgtggtgcttcccccagaggccgactacagcgggata
gcgcgcaacaatgtgagcttgactcagctgacatgcagctatgaggcagaaaaccagacc
cgctacctcgtgtgtgatctgggaaaccccatgaagtctggtaccagtttatgggccggc
cttcggttcactgtgcccagactgaaggacactcacaatactgtacagtttgagctccaa
atacgaagtaaaaatgcaaataactcggagagtgaagtggtgctgtttgagctggaggtg
gctgctgtggctgacgtcattctgcaaggtgtttctcgtccagacaaagtcatctttccc
ccgcccaactggaaggttagtcagagtctgagggaggagcaggacatcggccccgagctg
cagcaggtctatgagttggtgaataatggtcccagtgtggtcagcctgtccactttagag
gtgaggtgtcctctgagggcgcacggccatgagctgctctaccctgtggaggtggtcact
gaggggccgctcagctgctcctccaaacacaccttcaatgcactgaaactcaagctccag
cctgcagcagcacaggggcccacgtcactgatatccagccctgagcaccacatccggagg
agggaggtgtacagagatcttctgtctgaacaaggaaacctgacgtgctctacagtggag
tgctggcagctgcagtgtgatgtcggactgctggagagaggtgccagcgttatcctgatg
ttacgctccagactgtgggctgaaaccttcatcgagagggtctataagcagtatgttctg
gagtgctctgttcagtacaaggtggacaagatgccttattctattcctcccaaattcaag
ccattaggatccaaaaaggtggtgatagctgtgatgtggaacaagccggaaacccctttc
cctgttccagtctggatcatcatcctggctattctagctggattgctattactctccctg
ctcatatatctactatacaagatgggcttctttaaaaggtcagatccgtacggtacgacc
atggagaaggcccagctcaaaccccaggcgtcctctgaagcttag
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integrated database retrieval system
