Cottoperca gobio: 115008813
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Entry
115008813 CDS
T07513
Symbol
shq1
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgob03009
]
115008813 (shq1)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
115008813 (shq1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
PIH1_CS
Motif
Other DBs
NCBI-GeneID:
115008813
NCBI-ProteinID:
XP_029288511
Ensembl:
ENSCGOG00000020389
UniProt:
A0A6J2PT59
LinkDB
All DBs
Position
5:5473839..5515610
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AA seq
603 aa
AA seq
DB search
MLTPAFDLSQDPEYLIFSIRVPYTRTSAFDLYIDGTDFKFYAKPYFLRLSLPGRIVEDGR
EKAKFDIDKGLVTLQVPKETAGEDFEGLQMLTSLLAPKGSRSAKPLIEDISTGCSEGAGD
KEEEDEDEEEFDWQVEQEVYKESSAEELGALQKYGFGNQRSGVFARLQEELSDVTDVKNP
EGTTAAERRQGRLDAEASAFSPDHYLADLFEDDEIKRLLKFNPWWAKRSPSTQREGEDAV
SFTDAEKEQLRKFTNRSYLLDKKTRYQVWLSLVDILLAYSYEVRSTEGEYNVESPWTIRK
LSGTLCWLETYSSLQDVLVSFGRRVLCHPLYRHFSMISAAVRDTTKILQSEKACVLKCLL
DIHKVFRGNDPAYILNDLYITDYCIWIQRVKSKKMSVLAATLEKASLQKKDLELELEELE
EAATMVAEEESHSDSSSSSSDSSSSSSSSDSSDESEESEAEGQGCTESNERGGGGGGGGG
GGGEEEEMSKDNPPQPQPIPAASPIPQEPMSTLFSAENEVDDLPSASEGSRRLIQELGER
VAEELRIFQDCSTYKAERTCSLANGTAAKTEATSGRGSSGTLLELSPRRNPLLIVQTQED
LDE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttaactcctgcgtttgacctgagccaagatccagagtacctgatcttcagcatccgt
gtgccctacaccagaacatcggcgtttgacctgtacattgatggaacagatttcaagttc
tatgctaagccatactttctcagattatctcttcctggaagaatagtggaggatgggaga
gaaaaggccaaatttgacattgataaagggcttgtcactctccaggtcccaaaggaaaca
gctggggaagacttcgaaggacttcagatgctgacgagtcttctcgccccaaaaggctcc
cgttcagcaaaaccactgatagaagacataagcacgggatgcagtgaaggtgcgggagat
aaagaagaagaagatgaagatgaggaagaatttgactggcaggtggagcaggaggtgtac
aaggagagctctgcggaggagctgggagcgctgcagaaatatggctttggcaatcagagg
tctggagtgtttgcaagattacaggaggaactgagcgacgtgactgatgtcaagaaccca
gaaggaacgacggcagcagagaggaggcagggacggctggatgcagaggcctctgctttt
tctcctgaccattacctggctgatttgtttgaggatgatgagataaaaaggctgctgaag
tttaatccgtggtgggcaaagcggagtccttccacacagcgggagggagaagatgctgtt
tcattcaccgacgctgagaaggagcagctgaggaaattcaccaaccgctcctacctgctg
gacaagaaaacccgttaccaagtgtggctcagcctcgtggacatcctgctggcctattcc
tatgaagtgcgctctacagagggagagtacaacgtggagtcaccgtggactatcagaaaa
ctcagcgggactctctgctggctggagacgtacagctccctgcaagacgtcctggtgtca
tttggacggagggttttgtgccacccgctctacagacacttttccatgatctctgcagcc
gttcgtgacacaactaagattttgcagtccgagaaagcctgtgtcctcaaatgtctgctg
gatattcacaaagtattccgagggaacgacccggcctacatactgaacgatctgtacatc
acagactactgcatctggatccagagggtcaagtccaaaaagatgtcagtgttggctgcg
acgttggaaaaagcctccctgcagaaaaaagacttggagctggaactcgaagagctggag
gaggcagcaacaatggtggcagaggaagaatcccacagtgacagcagcagctcttctagt
gacagcagcagcagcagcagcagcagtgactcgtcagatgagagcgaggaatctgaggct
gaagggcaaggctgcaccgaatccaacgagaggggaggaggaggaggaggaggagggggg
ggggggggggaggaggaggagatgtctaaggacaaccctccacaaccccaacccatcccg
gctgcctctcccatcccccaggagcccatgagcacactcttctcagcggagaatgaggtg
gacgacctcccctcagcctcagaaggctccagacggctgatccaggagctgggggaacgg
gtggcggaggagctgagaatctttcaagactgcagcacctacaaagcagagagaacgtgt
tcactggcgaacggcaccgcagctaaaacagaagcaacatctgggaggggcagcagcggg
actttgttagagctgagtcctcgcagaaaccctctgctcatcgtccaaacacaggaggat
ctcgatgagtga
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