Cottoperca gobio: 115008823
Help
Entry
115008823 CDS
T07513
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115008823 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115008823 (smarcc2)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115008823 (smarcc2)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115008823 (smarcc2)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115008823 (smarcc2)
PBAF complex
115008823 (smarcc2)
GBAF(ncBAF) complex
115008823 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
115008823
NCBI-ProteinID:
XP_029288528
Ensembl:
ENSCGOG00000005373
UniProt:
A0A6J2PQT1
LinkDB
All DBs
Position
5:complement(18736389..18750100)
Genome browser
AA seq
1055 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKSFLEFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHLVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDGYDTWIPANEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGDGCPKRKRISAKTLTDEVTTPDERRDKKPVSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVPASEEGNPPKTS
NTKKDSDSTPVKGGADMDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQQMMSFPDKVKEKPADLQNFGLRTDMYSKKTGSAKSKSTASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLVDNSSTLGPLAYQPV
PFSQAGNPVMSSVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGERPDESNDESKSENPPGEEKREAKESKDGATEEEEK
QAENGKKEEERGREQEGEREADKTESEMGDGEKEKDGKEGTEEGQREAEIEGERKAKVER
DMGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHNQAGGPNTNQAA
PAPAPPPQGPTASQQTPSTPAPQPAPSPAPPASASAPAPETQPPQSAHTSPPCPPGATPA
ANSSSSSSTTPVLHEPTAPLSGETLHPSAPVPPPQ
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcctctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gccgagccccccaccaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggtgttcggtcgacatgtcagcaaccctccgctcaccaagctgcccatgaagagt
tttctggaattcaagtcaggaggggctctctgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccatcgaggatggaccgaaat
gtggagatgttcatgacgattgagaagtccttagtgcagaacaactgcctaagtagacca
gttatctacctgagctctgacatagagccaaagctgcttgggaaactgaaagacatcatc
aaaagacatcagggctcagtaactgaggacaaagcctccagctcccatcttgttgttcct
attcccaccagcctggaggaagaggaatgggtgcgtcccgtgatgaagagagacaaacaa
gtgctgctccactggggatattttcctgacggttatgatacctggatcccagccaatgag
attgaagctgctgtggaggatcctcccagcccagaaaagcccaggaaggtccatgccaag
tggattttagacctggaccagtacaacgagtggatgaatgaggaggactatgaagtgggc
gatggctgccctaagaggaagaggatctcagccaagactctaacggatgaggtgaccacg
cctgacgagcggagggataagaagcctgtcagtgccaagaagaggaagaggtcgccgtcg
ccctcccccacccctccgcctcaggagagcaagaagaagaataccaaaaaagggccaacg
accccgtacaccaagtctaaacggggccaaagggaggaggagcaggaagatcttagtaaa
gatttggatgaagcgtcacctgttccagcatctgaagagggaaacccacctaagacaagt
aacactaagaaggattctgattcaactccagtcaagggaggagcagacatggacgagcaa
gaggatgagtccatggaaacaacaggcaaggaggaggaggaaggctctccgagcgtgaag
ggtgagccagtgaaaggctcggaccttcatgaggacaatgtgactgagcaaactcatcac
attattataccgagctacgctgcctggtttgactacaacagtgttcatgccattgagcgc
agagccctgcccgagttttttaatgggaagaacaaatccaaaaccccggagatttatctg
gcgtacaggaacttcatgattgacacctaccggctgaaccctcaggagtacctgacatcc
accgcctgtcgcaggaacctggcaggagacgtgtgtgcaatcatgagagtccacgccttc
ctggagcagtggggcctgatcaactaccaggtggactccgagagccgacccacacccatg
ggccctccacccacctctcacttccacgtcctggcagacactccatcaagtctggtgccc
ctgcagcccaaaacatcccagaccccggctacccagcagatgatgtccttcccagataaa
gtgaaggagaaaccagcagatctacaaaactttgggctgcggactgacatgtacagcaag
aagaccggctctgcaaagagcaagagtacagccagctctatgagggagtggacagaacaa
gaaacactactactacttgagggtttggagatgtacaaggacgactggaacaaggtttca
gagcatgtgggcagccgtacacaggatgagtgcatcctgcacttcctgcggctgcctatt
gaagacccttacctggtggacaactcctccaccctgggaccgctggcctaccagccggta
cctttcagccaggcaggaaaccctgtcatgagctccgtggccttcctcgcctctgtcgtc
gacccacgcgtggcctcagcagctgccaagtcggctctggaggagttttctcgtatgaag
gaggaggttcctgcagcgctcgttgaggctcatgtgcggcgggtggaggaggcagcgagg
gtcagcggccgacaggacccgctgtatggcctggagggtagtggcatcgcaggcactggc
ctggaggagggagagagacctgatgaaagcaatgatgaaagtaagagtgagaacccacca
ggtgaagaaaagagggaggccaaggagagcaaagatggagcgactgaggaagaggagaag
caggcagagaatgggaagaaggaagaagaaagaggaagagaacaagaaggagagagggag
gcggacaaaacagagtcagagatgggcgatggggagaaggagaaggatggaaaagagggc
acagaggaaggacaaagagaggcggagattgaaggggagaggaaggctaaagtggagcgt
gatatgggagaggggaacctggccaccgctgctgcgtctgcgctcgctgctgctgccgtc
aaagccaagcacctggctgcagtggaagagaggaagatcaaatctctggtggctctgctg
gtggagacccaaatgaagaagctggagattaaactgcgacacttcgaagaactggaaact
atcatggatagagagagggaggctttggagtaccagcgtcagcagcttctggctgaccgt
cagtccttccacatggagcagttaaaatatgcagagatgagggcccgccagcagcacttc
cagcagattcagcaccagcagcacaaccaggccggaggccctaacaccaaccaggccgcc
ccggccccagccccgccaccccagggtccgaccgcaagtcagcaaactcccagcacacca
gcgccgcagccggcccccagccccgcgcctccagcctcagcttctgccccggcccctgag
acccaaccccctcagagtgctcacacctcgcccccctgccccccaggcgcgaccccagct
gccaactccagctccagctccagcactactcctgtactccatgagcccaccgcccctctg
tccggggaaacactccacccctcagctccagtcccccctccacagtga
DBGET
integrated database retrieval system
