Cottoperca gobio: 115009134
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Entry
115009134 CDS
T07513
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
cgob
Cottoperca gobio
Pathway
cgob03420
Nucleotide excision repair
cgob04115
p53 signaling pathway
cgob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115009134 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
115009134 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
115009134 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115009134 (ddb2)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115009134 (ddb2)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115009134 (ddb2)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115009134 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
115009134
NCBI-ProteinID:
XP_029288775
Ensembl:
ENSCGOG00000018311
UniProt:
A0A6J2PT95
LinkDB
All DBs
Position
6:17705312..17710220
Genome browser
AA seq
490 aa
AA seq
DB search
MKTRQKSADASESKGKVRKRAGENSGPTLSKKLRDRKHGETSKQGPPVKSTGVQKRGGYG
SILHYIYKNTLGQSLHSQMRQCLQEPFVRSLSSYHFHGATSPFDRRITCLEWHPTHLTSL
AVGSKGGDIYLWDFEVPAKKTFLQGSGAGDFIGGMKFCPTDNSKVYVASGEGTLTMQSFE
GRTPTVLSRIRDCGHDHHNVCYWYCCVDVSVSRRMLVTGDNVGQLVLLGLDGQKIFSEKL
HKAKVTHAEFNPRCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHEKAVNSACFNPVD
CSKLLTTDQYDQIRIYSSSDWSKPQHIIQHPHRQFQHLTPIKAAWHPVYDLIVAGRYPDD
RVCPGDQRTIDIYNSNTAELVCQLQDPTVSGIKSINKFSPMGDVIGSGMGVTVLVWDRNK
SLMSDSDAAQEDTSTSVDSARGQQRSRQRSSRERKAPAVDAKLKKKLVSLEELVTKTGSA
KQKQAQMRKK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgagacagaagtctgcagatgcatctgaatcaaagggtaaagtgaggaaaaga
gccggggagaactctggtccaactctctccaaaaaactacgagatagaaaacatggcgaa
acatccaaacaagggcctcctgtcaagtctacaggagtccagaagagaggagggtatggg
agcatcctgcactacatttacaagaacactctgggacaaagtcttcactcacagatgaga
cagtgtcttcaggaaccttttgttcgctcgctgtcgtcctatcatttccacggtgctacc
agccccttcgaccgcagaatcacctgtctggagtggcatcccactcatctcaccagtctg
gctgtgggatccaagggtggtgacatatatctgtgggactttgaggtgcctgcgaagaaa
acctttcttcaagggagcggagcaggagactttattggagggatgaaattttgcccaaca
gacaattccaaagtgtatgtggcttctggggagggcacactgaccatgcagagcttcgag
ggtcgcacacccaccgttctgtccagaattcgagactgtggccacgatcaccacaatgtt
tgttactggtactgctgtgtcgatgtgtctgtaagtcgacggatgcttgtgacaggagac
aatgtgggacagctcgtactcctgggtttggatggccaaaagattttcagtgaaaagcta
cacaaagccaaagtgacccatgcagagttcaacccacgttgtgattggttgttggcaacg
gcatcagtcgaccacacggtgaaactttgggacctgaggaacatcaaagacaagaagagc
ttccttcacgagatgcctcatgaaaaagctgtcaactcggcctgtttcaacccagtggac
tgctccaagttgctcaccacagatcagtacgaccagatccggatctactcgtcctctgat
tggtcgaagcctcaacatatcatccaacatccacacagacagtttcagcatctaacgccc
atcaaggccgcatggcaccctgtctatgacctaatagtggcaggccgctaccccgatgac
cgcgtttgccccggtgatcagaggaccatcgacatctataattccaacacagcagagctc
gtgtgtcagctgcaagatcccacagtctcagggatcaaatctataaacaaattcagtcca
atgggtgacgtgattggatctggaatgggtgtgacggtgctggtctgggatagaaacaag
tcattgatgagtgacagtgacgcagcgcaggaggacacctctacctcggtggacagtgca
agaggtcagcagaggagtcggcagcgctccagcagggaaaggaaagcgcctgctgtggat
gcaaagctcaagaagaaactggtttctctggaagaattggtgaccaagaccgggagcgcg
aaacaaaaacaagcacagatgaggaagaagtga
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integrated database retrieval system
