Cottoperca gobio: 115009193
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Entry
115009193 CDS
T07513
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgob03036
]
115009193 (tdrd12)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
115009193 (tdrd12)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115009193 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
115009193
NCBI-ProteinID:
XP_029288887
UniProt:
A0A6J2PUX2
LinkDB
All DBs
Position
6:26436717..26458764
Genome browser
AA seq
1403 aa
AA seq
DB search
MLSISLLKVESPSCLWGRVVRGPGGEVETADEYDRLLAQMNLFYHDVTQDLRQLKPTSLE
EGQVCVVYWSVMKSWCRAVVESIIMDSVTCRACCLLVDHGERLVVPSEQIRIAVQTFLQL
PFWVRRFHLAGIKPTTLQVSVYEEKAKLITSTRWDSSSTLYLHNLLQCKKHGRWMTTDVL
LKATSSTQTEAVLLESESDSTSVELYLRVGNIKICVNDDLVAKKFAYYSRESADGGELND
FDKLPVMLSSSILTQTVCTSSNKPTAHTQPPPAISSSLNCAAGAGDGLTAPSAAQSQQPE
LQPSVEGSRSKVIDQHLSNGRLKKSSERDSSEDTDSSLAAALTKDLSLFRFLKFLNPGSS
YQQAAPSVGQHEELKDCPPEETPAASSTCTGQEVRSVESGAAGKTWRTEEDWACARLLEW
LNPEPLNPDPAAADDAVAPKAPRDPRGSGVLVHSAFPVEPCTCLDDAPITDALRWVLLRK
QYSLSPAERYSWPAVARGCNTVIISPNAAQPLCYLAPLLTHILLNSIYTCLTSTAGPIAV
LLCPGWVKVQAVYELLEEMKVTSVLHPVIALLGVGKDEATAVKIPKNCLLLVTTPFSLVR
LLSCHCFLFLRLYHLVLDEADLLFTLAPDQMATILQHFQKVTSSEKKASCPQQLVAVARR
WTSHMEGLLANHMPSPCIVMSVPEEAALYGDVQQIILMTVESSKVSVLLGALDFNPEVGQ
KTLIVAKSAAEVEDVFKAVSNKSVFCLQTHEGSTHQFDSVVQQWRKDVGPGSHVILVTTT
ECLKCLGVRDATCVVHYSFPTSPKVFGGRLFCMSENFRNLCERDQTRSRHLTRSVLLISE
RNACHVVGVLRYLERTSAPLPPELLAFAQGVHVAREDQKTNKPLCSYIKSYGVCRDGTSC
PDRHTLIPQLDQSVLPACGVIEVVPLYIKTASVFYGRVVRMEDGRFQSMASEMTSYYADK
KPGAMEMLEGGLYAVQEDELFHRVKVLAVPDRGDRMFFCVSVRFIDVGKEEEVKSHQVLE
LPERFHSLPGQAVEIIACRVKPVDEETDWHPKVTRAISQKIRGLQHRAQVLLSLGNTVFV
DPMVRMAQVPGVKTVINEYNVQSEILNSGMGVRNPEHLDLLRALCQESKEAAHHSGSGGG
PVSLELRIKAEEEVLAEAVRAAEVSQLADLPHLEPCEPLSPVCAMIQSLVPAPAELHLVP
VCVQKLLLARQEAVGQRNSPEQMRIGDGGELCCTTSEAASLTRGEHQSNSQQLSSTRETD
RADATKSFHPPARWYQTSDSVIVTMKLRNPESPRCHFYDDRVVYSCRANDRTYRADLQLH
ANIAPDRCCWEMKSNEPVLKLVKQQQGCWERLLRNKVLQNIFVSYDMEHFEQEEERISNG
RCFVENTGKDDRYVNSESGSESD
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcatatcacttttgaaggttgaaagtccgtcctgtctctgggggcgggttgtt
cggggtcccggcggtgaagtagagaccgcagatgagtacgaccgtctgctggctcagatg
aacctcttctaccacgacgtcactcaagacctgcgccagctgaagcccacatcgttagag
gaggggcaggtgtgtgtggtgtactggtcggtgatgaagtcgtggtgtcgggctgtggtg
gagtcgatcattatggactcggtgacctgtcgggcttgctgcctcctggtcgaccacgga
gaacgactcgtcgtcccctcagaacagatccgaatcgcggtgcagaccttcctccagctg
cctttctgggtgaggaggttccacctggcgggaatcaaaccaacaaccctgcaagtgtct
gtctatgaggagaaggcaaagctcattacgtccactcgatgggacagctcttctacactc
tacctgcacaacctgctgcagtgtaagaaacatggcagatggatgacaacagatgttctt
ttaaaagcaacatcgtccactcagacagaggccgtgttgcttgaatccgagtcagactcc
acctccgttgagctctacctgcgcgtggggaacatcaagatctgtgtgaacgacgacctg
gtggccaagaagtttgcgtattacagcagagagtcggctgacggcggcgagctgaacgat
ttcgacaaacttcctgtcatgttgtcctccagcatcttaacccagacggtctgcacaagc
tcaaacaagccgacagcgcacacccaaccacctcctgctatttcttcaagccttaattgt
gcagccggagcaggtgatggtctgactgctccctctgcagctcagagccaacaacctgag
ctgcagccctctgtagaaggcagcaggtcaaaggtcatagaccaacatctgtctaacggc
cggctgaagaagagctcagagagggactcgtcagaggacacagactcgtctctggctgca
gctctgaccaaagatctcagtctgttcaggttcctgaagtttctgaatcctggcagcagc
taccagcaggcagctcccagtgtcggtcagcatgaagagctcaaagactgtccacctgaa
gagacgcctgcagcctccagcacctgcacgggacaggaagttagatcagtggagtcggga
gcagcagggaagacgtggaggactgaagaagactgggcctgtgcacggctgttggagtgg
ttgaacccggagcctctgaacccggatccagccgctgcagacgacgcggttgctcccaag
gctcccagggatcccagggggagtggggttctggtgcactctgccttcccagtggagccc
tgcacctgcctggatgatgcccccatcacggatgctctccgctgggtgttgctcaggaag
cagtacagtctgagtccagctgagcgttacagctggccggctgtggcccgaggatgcaac
accgtcatcatctcccccaacgctgcccagccactctgctacctcgccccgctgctcacc
cacatcctgctcaactccatctacacctgcctaacctccaccgcaggcccgatagcggtg
ctgctgtgtccaggctgggtcaaagtccaggccgtgtacgaactgctggaggagatgaag
gtcacctccgtcctccatcctgtcatcgcgctgctgggcgtcgggaaagacgaggcgacg
gctgtgaagatccccaaaaactgtctgctgttggtgaccactcccttcagtctggtccgt
ctgctgtcctgtcactgcttcctgttcctgcgtctgtaccacctcgtgctggacgaggcc
gacctgctcttcactctggctccagatcagatggccaccattttgcagcatttccagaag
gtgacctccagcgagaagaaggcttcctgtcctcagcagctcgtcgctgtggccagaaga
tggaccagtcacatggagggtttgttagccaatcacatgccttccccctgcattgtcatg
agcgtccctgaggaagctgctctctatggtgacgttcagcagatcatcctcatgactgtg
gagagcagtaaggtctcagtgctgttgggtgcgttggatttcaaccctgaagtcggccag
aagactctgatcgtagccaaatctgctgcggaggttgaagacgtgttcaaggccgtgagc
aacaagtcagtgttctgcctccagacccacgaggggtcaacgcaccagtttgactcggtc
gtccagcagtggaggaaagacgtcggccccggctctcatgtgattctggtgacgaccacc
gagtgtctgaagtgtctgggagtcagagatgccacttgtgtcgtccactacagcttcccc
acttcccccaaagtattcggcggccggctcttctgtatgtccgagaacttccgaaacctt
tgtgaacgagatcagacgaggagccgtcatctcaccaggtcggtgctgctgatctctgag
aggaacgcgtgtcacgtagtcggggttctgcgttacctggagcgaaccagcgccccgctg
ccccctgagctgctggccttcgctcagggcgtccatgtggcccgggaggaccagaagacc
aacaagcctctctgcagctacatcaagagctacggagtctgcagagatggcacttcctgt
cccgaccgtcacacgttgattccccagctggaccagtctgtgcttcctgcctgcggagtc
atagaagttgtgcctctctacataaagacggcttcagtgttctacggtcgtgttgtgagg
atggaggacggacgttttcagagcatggcgtctgagatgacgtcttactatgccgacaag
aaacccggagccatggagatgctggagggagggttgtacgccgtgcaggaggacgagctc
ttccacagggtgaaggtcctggccgtccccgacagaggtgaccgcatgttcttctgcgtc
tccgttcggttcattgacgtgggaaaggaagaggaggtcaaatcccatcaggtccttgag
ctcccggagcgtttccactcgctgcccggccaggccgtggagatcatcgcctgccgggtc
aaaccggtcgacgaagagaccgactggcaccccaaggtcaccagagcgatcagccagaag
atccgaggcctgcagcaccgagcccaagtgcttctcagtctgggaaacactgtttttgtt
gatcccatggtgcgtatggcccaggtgccaggtgtgaaaactgtgatcaatgaatacaac
gtgcagtcagagatcctgaactctgggatgggagtcagaaacccggagcatctggacctg
ctgagggcgctctgccaggagagcaaggaggcggctcaccactctgggtcgggcggcggc
ccggtgtctctggagctcaggatcaaagctgaggaggaagttctggctgaagccgtcaga
gcagctgaggtcagtcagctcgctgaccttcctcacctcgagccatgtgagccactcagt
ccggtctgtgcaatgatccagtccctggtcccagcaccagcagaactccacctggtccca
gtgtgtgttcagaaactcctgttggcccgtcaggaagctgttggacagagaaacagccct
gagcagatgaggatcggagacggaggagaactttgctgcacgaccagcgaggctgcttcg
ctgacccgcggtgaacatcaaagcaacagccagcagctcagcagcaccagagagacggac
cgtgctgacgccacaaagagtttccaccctccggcccgctggtaccagacgtccgactct
gtgatcgtcacgatgaagctgaggaacccggagagtccgcgctgccacttctacgacgac
agagtcgtgtacagttgcagagcgaacgatcggacctacagagccgacctgcagcttcac
gccaacatcgctcccgaccgctgctgctgggaaatgaagtccaatgagccggtgctcaaa
ctggtgaaacaacagcagggatgctgggagagactcctcaggaacaaggtgctgcagaat
atctttgtgagttacgacatggagcactttgagcaggaagaagaaagaatctcaaatggc
cggtgttttgtagagaacacaggaaaggacgaccgctacgtgaactcagagagcggcagt
gagagcgactga
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