Cottoperca gobio: 115009198
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Entry
115009198 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115009198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115009198
03036 Chromosome and associated proteins [BR:
cgob03036
]
115009198
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115009198
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
115009198
Chromatin remodeling factors
BAF complex
115009198
PBAF complex
115009198
GBAF(ncBAF) complex
115009198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Asparaginase
Motif
Other DBs
NCBI-GeneID:
115009198
NCBI-ProteinID:
XP_029288909
Ensembl:
ENSCGOG00000020723
UniProt:
A0A6J2PU76
LinkDB
All DBs
Position
1:11885475..11903378
Genome browser
AA seq
1666 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGAMLGPSRGPSPGSSHSMMGPSPGPPSSGHSQPGPS
GYGQDSMHPLHKPLESMHEKSMSEESRFTQMKGLSMRQGGHSGMGPPPSPLDQHSQGYHS
PLGGSDHSSPVPSNGPPSGPLMPSSSSSSSSGGPGSASAPLDGPIGDQHTLGPNNWPGPP
GSTGPGPSPGPSMGPSVSIHGSGLESGGPPCPGGPGGPTPFNQNQLHQLRAQIMAYKMLT
RGQPLPDHLQMAVQGKRPMPGMQQQPMSSLAPGAGGGPIGGPAGPVPGPGLIGSGYSRVH
GMMGPNMLPPGPSGTPTVTQIQNPNGPPKSWPEGPMVNAAAPFNAPQKLIPPQPTGRPSP
APPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQNRITPIQKPCGLDPVEILQEREFR
LQARITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETA
LDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSM
TGKMQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYL
LQQTDEYVANLTDLVRAHKAEQALKEKKKKKKKKKKLESAEGQTPAMGPDGEPLDETSQM
SDLPVKVIHVDSGHILTGVDAPKAGQLETWLEMNPGYEMAPRSDSEDSEEEEEEEEEEEP
QPPANQMVEKKKISHPDSEDVSEVDVQHIIENAKQDVDDEYSGAVFARGLQSYYSVAHAV
TERVDKQSSLLVNGQLKQYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQAIALITYLME
LKRLNGPYLIIVPLSTLSNWVYEFDKWAPTIVKVSYKGSPSARRAFVPQLRSGKFNVLLT
TYEYIIKDKQILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNKL
PELWALLNFLLPTIFKSCITFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLR
RLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNT
IMQLRKICNHPYMFQQIEESFSEHLGFSGGIVQGLDLYRASGKFEVLDRILPKLNATNHK
VLLFCQMTSLMTIMEDYFAYRSFKYLRLDGSTKADDRGMLLKTFNEPGSEYFIFLLSTRA
GGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLCTINSVEEKILAAA
KYKLNVDQKVIQAGMFDQKSSSHERKAFLQAILEHEEQDEVWGPEVCLRINEEDEVPDDE
TVNQMIARSEEEFDQFMRMDLDRRREDARNPRRKPRLMEEDELPTWIMKDDAEVERLTCE
EEDEKMFGRGSRHRKDVDYSDSLTEKQWLKAIEEGTLDEVEEEVRHKKTTRKRRRDRDLD
LPGPSSSLGGRGDKDEDGKRQRKRGRPPADKLSPNTPALTKKMRKIVDAVIKYKDSASGR
QLSEVFIQLPSRKELPEYYELIRKPVDFRKIKEKIRGHRYRSLGDLERDVMLLFQNAQTF
NLEGSLIYEDSIVLQSVFTSLRQKIEKEEESEGEESEEEDLEEGSESESRSVKMKIRLGR
KDKGGDHGKGRSRRTGRNRAKPVVSDDDSEDEQEEERSPSATDEES
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccagatcccccaatgggaggcacccctcggccaggtccttcccctggccca
ggtccctctcctggggctatgctaggccccagccgcgggccctccccaggctcctctcac
agtatgatgggccccagccctggccctccctcctctgggcactcgcagccagggccctct
ggatacggccaggacagcatgcaccctctgcacaaacccttggagagcatgcatgagaag
agcatgagtgaggagagccgcttcactcagatgaagggactgtctatgagacagggcggg
cacagtggcatgggccccccacccagtcctctagaccaacactcacaaggttaccactct
ccattagggggctctgaccactccagccctgtcccttcaaacggccccccctctggacct
ctcatgccatcttcctcttcctcctcctcctctggtggtcccggctctgcctctgcacct
ttagatggccccattggagatcaacacactctgggtcccaataactggcccggccctcca
ggtagcaccggcccaggccccagtcctggacccagcatgggccccagtgtctccatccat
ggttctggccttgaatctggaggccctccatgcccgggaggtcctggtggcccgactccc
ttcaaccagaaccagcttcaccaactcagagcccagatcatggcttataagatgctgacc
cgggggcagcctctgccagatcacctccagatggctgtccaagggaagaggccaatgcct
gggatgcaacagcagcccatgtccagcctggctcctggagctggaggcgggccaataggg
ggcccagcaggaccagtaccaggacctggtctaataggatcaggctacagtcgagttcat
ggaatgatgggtcccaacatgcttcctccaggcccatcgggtactccaactgtgacgcag
atacaaaacccaaatggacctcccaagtcctggcctgaaggccccatggtgaatgcagca
gcccccttcaacgcaccccagaagcttattccccctcagcccactggtcggccctctcct
gcccctccttcagttccccccgctgcctctcctgtaatgcctccacagactcagtctccc
ggccagccagcacagcctactcccatgatgccataccatgccaagcagaaccgcattacc
cccattcagaaaccctgcggcctcgacccagtggagatattgcaggaaagggagttcagg
ctacaggctcgtatcactcatcgtattgctgaactggagaacctgccgggctctctggct
ggagatttacgtacaaaagctactatagagctcaaagccctccgactgcttaacttccag
agacagttgcgtcaagaggtggtggtgtgcatgcgccgggacaccgctctagagacggcc
ctcgatgctaaggcctacaagcgaagcaagcgtcagtctctgcgagaggcgcgcatcaca
gagaaactggagaaacagcagaagattgagcaagagcgcaaacgcaggcagaaacatcag
gagtacctcaacagcatcctgcagcacgccaaagacttcaaagagtaccaccgctccatg
acaggcaaaatgcagaaactgaccaaagctgtggccacctaccatgccaacactgagcgg
gagcagaagaaagagaatgagcgtattgagaaagagaggatgaggaggctcatggccgag
gatgaggagggctatcgtaaactgattgaccagaagaaggataagcgtctggcctacctg
ttgcagcaaactgacgagtatgtggcaaacctcaccgacctggtcagagctcacaaagct
gagcaggccctcaaggagaagaagaagaagaagaagaaaaagaagaagttggagagtgct
gagggtcagacacctgccatgggtccagatggagagcctctggatgagacgagtcagatg
agcgacctgcctgtgaaggtcatccatgtggacagcgggcacatcctgacaggagtggac
gctccgaaagcgggacagctggagacctggctggagatgaaccctggttatgaaatggct
cctcgctcagacagtgaagacagcgaggaggaggaagaggaggaggaggaagaggagcct
cagccgccggctaatcagatggtggaaaagaagaagatatcacaccccgatagcgaagac
gtgtccgaggtggacgtccaacacatcatcgaaaatgctaaacaggatgtggatgacgaa
tatagcggtgcagtgttcgcccgaggcctccagtcttattattctgtggctcacgctgtc
acagagagggtggacaaacagtccagtttgttagtaaatggacaactcaaacagtatcag
gttaaaggtttggagtggctggtttctctttacaacaataacctgaatgggatcctggcg
gatgagatgggcctggggaaaaccatccaagctatcgccctgatcacgtacctcatggag
ctcaaacggctcaacggtccctacctcatcattgttcccctctcaactctttctaactgg
gtgtatgagtttgacaagtgggctccgacaatcgtgaaagtgtcttacaaggggtctcct
tctgccagaagagcattcgtcccccaactgcgcagcggcaagtttaatgttttactcacc
acttatgagtacatcatcaaggataaacaaatactggccaagattcgttggaagtacatg
attgtggacgagggccaccgtatgaagaaccaccactgtaaactgacccaggtcctgaac
acacactatctggccccacggcgagtcctgctgacaggaacgcctctgcagaacaaacta
cctgagctctgggcgttgctaaacttcctcctgcccaccatcttcaagagctgcatcacc
ttcgagcagtggttcaatgcccctttcgccatgactggagagaaggttgaccttaatgaa
gaggagaccatcttgattatccgtcgtctccacaaagtacttcgccccttcctgttacgc
agattaaagaaggaagtggaggcacagctaccagagaaggtggagtacgtgatcaagtgt
gacatgtcgtctcttcagagggtgctgtacaggcacatgcaggccaagggggtcctactc
acggatggatcagaaaaggacaagaagggtaaaggaggcactaagacgctgatgaacacc
atcatgcagctgaggaagatctgtaaccacccttacatgttccagcaaattgaggaatct
ttctctgaacatttaggcttctctggtgggatagtccagggtcttgacctgtatcgggca
tcaggaaagtttgaggtgttggatcgaatcctgccaaagctgaacgccactaaccacaaa
gtgctgctcttctgtcagatgacctcactcatgaccatcatggaggactactttgcctat
cgcagctttaagtatctgcgtctggatggctctacaaaagctgacgatagaggaatgtta
ctgaagacattcaatgaaccagggtcagagtactttatcttcctcctgagcacaagagct
ggaggcctcggcctcaacttgcagtctgcagacactgtgattatttttgactctgactgg
aacccacatcaggatctgcaggctcaggacagagcccaccgtattggtcagaagaatgag
gtgcgtgtgctgcgtctttgcacaataaacagcgttgaagagaaaatcctggctgctgcc
aagtacaaactgaacgtggatcaaaaggtcattcaggctggcatgtttgaccagaagtct
tccagccacgagcgcaaggccttcctgcaggccatcctggaacatgaagagcaggacgag
gtctgggggccggaagtgtgtctacgcattaatgaggaggatgaggtgccagatgacgag
actgtcaaccagatgatcgccaggagtgaggaggagttcgaccagtttatgcgtatggac
cttgaccggcgtcgtgaggatgcccgtaacccacggcgaaaacctcgtctgatggaggag
gacgagctgcccacttggatcatgaaagacgacgctgaggttgaacgtctgacctgcgag
gaagaggacgagaaaatgtttggccgaggttctcgacatcggaaagatgtggactacagc
gattcactgacggagaagcagtggctcaaggcgatagaggagggcacactggatgaagtg
gaggaggaggtacgtcacaaaaagacgacgcgcaaaaggaggcgagaccgcgacctggat
ctccctggtccctcctcttccctggggggacgaggggacaaagatgaagacgggaagagg
cagaggaagaggggaagaccacctgctgataaactctcccccaacacccctgccctcaca
aagaagatgaggaagatcgtggacgctgtcatcaagtataaagacagcgccagtgggcgt
cagctgagcgaggtgttcatccagctgccgtctcgaaaagagctgccagagtactacgaa
ctgatccgcaagcctgtggacttcaggaagatcaaggagaagattcgaggtcatcgctac
cgcagtctgggtgacctggagagagacgtcatgctgctcttccaaaacgctcagaccttc
aacctggagggatcactgatatatgaagactccattgtcctccagtcagtgtttaccagt
ctgaggcaaaagatcgagaaggaggaggaaagtgagggagaggagagtgaggaagaggat
ctggaggaaggatcagagtctgaatctcgctcagtgaaaatgaagatccgtctgggaagg
aaggataaaggtggagatcatgggaagggacgcagcagacgaacaggacgcaacagagcc
aaacctgttgttagtgatgacgactcagaggatgagcaggaagaggagcgttcccccagt
gccactgacgaggagtcctga
DBGET
integrated database retrieval system
