Cottoperca gobio: 115009271
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Entry
115009271 CDS
T07513
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115009271
03036 Chromosome and associated proteins [BR:
cgob03036
]
115009271
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115009271
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115009271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
115009271
NCBI-ProteinID:
XP_029289009
UniProt:
A0A6J2PUH7
LinkDB
All DBs
Position
6:2635158..2649473
Genome browser
AA seq
845 aa
AA seq
DB search
MDGGPTDGVGVVELPTKDFPSIQAIHSHDAMVADLLQQAAEAGGVVEGQAGVILEQGHGE
GIMVASQAHHQMMEAGVGIGLDGAGVEMMVMDSLDPTLLQMKTEVMDAAVGGLSATMGVI
GGVAGAAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSATTVEALQQGTFL
DTTAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEGLEAHTEQQEDEEVGHHLL
EGEDERIQPTNDDSNWAKDPDYQPPCGSLRKTKKGKKSRLRYAEGDKDMDVSVYDFEEEQ
QEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDER
PHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFK
CSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYIC
HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRYC
DAVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKTF
RQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHSENCNGEVDDAENGAPTPK
KGRRGRKRKMRSRRDEDDSEEDNAELDDDDEDEEDGDGEEEASPLQDEEEPESMELDQAP
AAIPVPAPDEPPVKRKRGRPPKNAPKPPTPCKSVRVAAKVAATAAAIIQVEDESTGAVEN
IIVKKEDSDPSAVTPLEQGVALTVEGLGLDGEGVETVELAVNEETAAAAANGDLTPEMIL
SMMDR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggacggagggccgacagatggtgtaggggtggtggagctccccaccaaagatttcccc
tccatccaggccattcacagccatgatgccatggtcgctgacctcctccaacaagctgca
gaggctgggggcgtggtcgagggacaagcaggagtcatcctggaacaaggtcacggggaa
ggaataatggtagccagccaggcccatcatcagatgatggaagctggggtggggattggc
ttggatggagccggggttgaaatgatggttatggactcactggatcccaccctgttgcag
atgaagactgaggtgatggatgctgcagtgggaggattatcggcgaccatgggtgtcatt
ggaggggtagcaggagctgctcaccaagcaactgtaacaacagtggaccagactcaaatc
atcacactacaggtggttaacatggaggagcaggcagctctgggtctgggggagctccag
ctggtccaggtgcccgtttctgccaccactgtggaggccctgcagcaaggcaccttttta
gacactactgccatgccaaaggacggcgacccagtcatctgccacaccctgccgctgcct
gagggctttcaggtggtcaaggttggagctaatggggaggtggagacagtggagcaggag
gagggattagaagcccacactgaacagcaggaagatgaggaagtgggacaccacttgctt
gaaggggaggatgaacgcattcagcctacgaatgacgactcaaactgggctaaagacccg
gactatcagcccccatgtggatctctcaggaagaccaagaagggtaaaaagagtcgtctg
cgttatgctgaaggagataaggacatggatgtcagtgtctatgactttgaagaggaacag
caggagggccttctatctgaggtcaatgctgagaaagtagtgggcaacatgaaaccaccc
aaacccaccaagatcaagaagaaaggagtaaagaagacgtttcagtgtgagctgtgcagc
tacacgtgccctcggcgatccaacctggacagacacatgaagagtcacacagacgagaga
cctcacaaatgtcacctgtgtggaagagccttcaggacggtcaccctgctaagaaaccat
ctcaatacacacacaggaactcgtcctcacaagtgcacagactgtgatatggcttttgtg
actagtggagagttggttcgccatcgtcgctacaaacacacgcatgagaaacccttcaaa
tgctccatgtgtgactatgccagtgtggaggtgagcaaactaaagcgtcacatccgctcc
cacaccggtgagcgtccgttccagtgcagtctttgcagctacgccagcagagacacatac
aagctgaagagacacatgaggacacactcaggagagaaaccttatgagtgctacatctgc
cacgcccgattcacccagagtggaaccatgaagatgcatattctgcagaaacacacagag
aacgtggccaaattccactgtccacactgtgacactgtcatcgcacgcaagagtgacctg
ggcgtccatcttcgtaagcagcactcattcattgagactggaaagaagtgccgctactgc
gacgccgttttccacgagcgctacgctctgatccaacatcagaagtcccataagaacgag
aagaggttcaaatgcgacatgtgtgactactgctgccgccaggagcgccacatggtcatg
catcgtcgaacccacactggagagaaaccatatgcctgcagccaatgtgagaagaccttc
agacagaagcagctcctggacatgcacttcaaacgctaccacgaccccaactttgtaccc
accgcattcgtctgccccaagtgtagcaagaccttcactcgcaggaacaccatggctcgc
cactctgagaactgcaacggtgaggtggatgatgccgagaatggagctccaaccccaaag
aaagggaggagaggaagaaagaggaagatgaggagcaggagagatgaggatgacagcgag
gaggataatgctgaactggatgatgatgatgaggacgaggaggatggtgatggtgaggaa
gaagcatcaccgctacaggatgaggaggagccagaaagcatggaactggaccaggccccc
gccgccatcccagtaccagctcccgacgagccaccagtcaagaggaaacgaggccgaccc
ccaaagaacgcccccaagcctccaactccctgcaaatctgtcagggtggctgccaaggtg
gctgctactgctgctgccatcattcaggtggaggatgagagtactggagcagtggagaac
atcatagtgaagaaggaagatagcgacccctctgcagtgacacctctggagcagggagtg
gccctgaccgtggaggggctggggctagacggggaaggggttgagactgttgagctggct
gtgaatgaggaaacagccgctgccgccgccaatggtgatctgacaccagagatgatcctc
agcatgatggaccggtga
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