Cottoperca gobio: 115009661
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Entry
115009661 CDS
T07513
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03022
Basal transcription factors
cgob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115009661 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
115009661 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115009661 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115009661 (gtf2h1)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115009661 (gtf2h1)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115009661 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
115009661
NCBI-ProteinID:
XP_029289681
Ensembl:
ENSCGOG00000003846
UniProt:
A0A6J2PWJ3
LinkDB
All DBs
Position
6:complement(18044635..18051668)
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVMKKVRQRKQDGTLYLMAERIAWGPEGKDRFSVSHLYADIRCQKISPDGK
AKIQLQLVLHTGDSTTFHFSNESSALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGDINNADPALFNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYNENVPHDLTEKEFWTRFFQSHYFHRDRINTGTQ
DIFSECAKQDELGLKSMVVQGVRNPLVDLLSLEDKTLDEGYGVSTTLPSTSNSNRTVKDS
SNSAIIKRFNHHSAMVLAAGSRKGDIPADQANETSSTDGNSRDSDFFQPPVKKVKIQEAI
EYEDLRREKKPKTVPLNLKKSDRYAHGPVPLQSQQYKTGQDIINSLNYIRHEMVNYKPNL
TQVLCSTTASSAIAALSPGGVLMQATTQQAINQMVPTDVQGELKHLYAAAGELLRHFWSC
FPVNTPFLEEKVSKMKSNLERFQMTKLCPFQEKIQRQYLSANLTGHLEEMFQTAYSKFHV
WQTRRMLRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcctcactatcagaagaggtgctgctggtaatgaaaaaggttcgccagaggaagcag
gatggcacactttatctgatggctgaacgtatagcctggggtccagagggcaaagaccgc
ttctcagtcagccacttgtatgcagatattcgttgtcagaagatcagcccagatggtaaa
gccaaaattcagctgcagctggtgcttcacaccggcgacagtaccacattccacttttcc
aatgagagcagtgcactcaaagacagagacgctgccaaggagctgctacagcagctgctg
cccaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgcttcaagaa
gatcctgtgcttttccagttgtataaagatctcgtggtgagccaggtgatcagtgcggat
gaattctgggccaaccggttaggagacataaacaatgcagaccccgctttattcaacaac
aaacaggaagtcggtatatctggagcctttctggcagacattagacctcagacagatggc
tgcaatggcttgagatataatctaacagctgacattattgaatccatcttcagaacatac
cctgcagtgaagcagaagtataatgaaaatgtgcctcatgacctgacggagaaggagttc
tggacccgctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatatcttctcagagtgtgccaaacaggatgaactggggttaaagtctatggtggttcaa
ggagtgaggaatcctttggtcgacctcttgtctttggaggataaaacgttagacgagggt
tatggagttagcacaacattgccctcaacttccaattccaacaggactgtgaaagatagc
agcaactctgccataataaagcggttcaaccatcacagtgccatggtgctggcagcaggc
tcgcgcaagggggacataccagctgaccaagctaatgagacgagcagcacagatggaaac
tcaagggactctgacttcttccagcctcctgtaaaaaaggttaaaatacaagaagccata
gaatatgaagatctgcgacgggaaaagaaaccaaaaacggtgccgttaaacctcaagaag
tctgacaggtatgctcatggtcctgtgccacttcagtcccaacaatataagactggccag
gatatcatcaactcgctcaactacatccggcatgagatggtcaattataaacccaacctc
actcaggtgttgtgcagtacaacagctagttctgccattgcagcactttctccaggtggc
gtcctcatgcaggcaacaacacagcaagccataaatcagatggtacctactgatgttcaa
ggagagttgaagcatctttatgcagctgctggagagttgttgagacacttctggtcctgt
tttcctgtaaacacaccatttttggaggagaaggtgtcgaaaatgaagtcaaacctggag
agatttcagatgaccaagctttgtccttttcaagagaagattcagcgtcagtacttgagt
gcaaatctcacagggcatttggaggagatgtttcagacggcctatagcaagttccacgtc
tggcaaacccggcgcatgttgaggaaaacctga
DBGET
integrated database retrieval system
