Cottoperca gobio: 115009680
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Entry
115009680 CDS
T07513
Symbol
myo5c
Name
(RefSeq) LOW QUALITY PROTEIN: unconventional myosin-Vc
KO
K10357
myosin V
Organism
cgob
Cottoperca gobio
Pathway
cgob04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115009680 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115009680 (myo5c)
04131 Membrane trafficking [BR:
cgob04131
]
115009680 (myo5c)
03029 Mitochondrial biogenesis [BR:
cgob03029
]
115009680 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgob04812
]
115009680 (myo5c)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115009680 (myo5c)
mRNA cycle factors
P-body specific factors
115009680 (myo5c)
Membrane trafficking [BR:
cgob04131
]
Others
Actin-binding proteins
Myosins
115009680 (myo5c)
Mitochondrial biogenesis [BR:
cgob03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115009680 (myo5c)
Cytoskeleton proteins [BR:
cgob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115009680 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
115009680
NCBI-ProteinID:
XP_029289703
UniProt:
A0A6J2PU61
LinkDB
All DBs
Position
6:complement(18392316..18403044)
Genome browser
AA seq
1742 aa
AA seq
DB search
MALSELYTKYNRVWIPDAEHVWKSAEILKDFQNGDNVLELLLEDGTEHYYPVDPSKLQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQRHVYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHTNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQTENERNYHIFYQMCSCAHLPEFKTLRLLSADKFEYTCMGGEITIEGVD
DEKDMEETRRTFSLLGLNEDFQSDVFKVLAAILHLGNMEIRNSGDGKSSVPPSDPHLAVF
CELLDVSAEELSRWLCHRRIVLVVETVVKPVPKERAVNARDALAKQIYAHLFDCIINKIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDRSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELIDILRDSKFPFLANFFREEEQSTVK
TKAVKVRPARPAVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEGDLSDKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTLQKHVRGWSQKRKYLRMR
EAAIILQLYIRGKRTIRKTVTAATLKQGWATLMIQRYWRGYRMRQIFHVVRLASITIQAF
TRGWMARKRYKKMMEEQKALILQKYARAWLARRRFQTMRRLVINVQLSFRVQQLRKKIDE
QNKENRGLMERLTSLANSHSHTVDKLQGLEAQLEKSTNQKVSLEAREKKAKEDASLTTTQ
LQKKIDALNLEKQNVEKQFEASTKEAKESFDHIKRNLLEEKEHEARFRKIAENNTEIQTQ
DHEKEVETLKEEIKRLKEERVGLQRKVEEGGQVNSDLEEQVVQLTKHVKAIPELRRDLNN
LQNQRNNMDRKMKQQSEEARAKMNDITRQLLGGVVEETVLLGLTPDDSEKIYEFEDLLAA
FDGLQKASRILESHQREQKEHFETQAEGLKMKVDHLQNENSKLQNLFQEKSNVNENIRQE
VSRLSSENSVLPELKLQALELQRQKQELETHVEEQSRELAEKTEEITNVLQKKVKEESSQ
RRHFEEKAGELEELKSELQGRVEELGEENDHLKRQLLMEREAKSKLRQETSLLTAENMDF
EEQLDQKDRLLKKLQNQIKSLETSQKAKQTSAPAIPKDYLGMLEYKREDESRLIQNIILD
LKPKGVVVNLIPSLPAYILFMCVRHADYLNDEVKLKSLMNAIISAVKKVIMSHLKDFDLL
SFWLSNMYQLLNCLKQYSGEEEFLKQNTPGQKKNCLQNFDLSEHRQILSDLAIQIYHQFV
SVMEKTLTPAIVPGMLEHESLQGISSMKPTGVRKRSDSIYDDSETHTISSIVQQLSAFHS
TMSQHGMEQGLIKQAVKQMFYLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSNAIDTLRPLSQAAWLLQVNKSTDDDAKEITEQCTELNPVQIVKILNSYTPIDDFE
KRVTPAFVRKVQSLLHDREGSTQLMLGSDYRFQVTFPFRSSSQALELLQVPSSLHLGFLI
RV
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtcggaattgtacaccaagtacaacagagtttggataccagacgcagaacat
gtgtggaaatcagccgagattctgaaagactttcagaatggggataatgttcttgaattg
cttcttgaagatggcactgagcactactaccctgttgacccgtcaaaactacaactgcct
ccacttcgcaacccggacatcttggtgggggaaaacgacctcacggctctcagctacctg
catgaacctgcagtcctgcataatcttaaagtgcgctttgtggagtccagaatcatctac
acctactgtggtattatactggtagctgtaaatccttacaaacagcgtcatgtctatgga
gatgcaatcattcatgcctactcaggccagaacatgggagacatggaccctcatatattt
gcagtggcagaggaggcttacaaacagatggccagaaaccacacaaaccagtctatcatc
gtcagtggtgaatctggagccgggaaaacagtgtctgctcggtacgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagtagaagacaaagtcctggcatccaat
ccgataacagaggcaataggaaacgcaaagaccaccaggaatgacaacagcagccgattt
gggaaatacacagagatcagctttgacaggcggtaccggatcatcggagcgaacatgagg
acctacctcctagagaaatccagagtcgtttttcagacagagaacgagcgaaactatcac
atattctaccagatgtgttcctgcgctcacctgccagagttcaagactctaagactgttg
agtgcagataagttcgagtacacctgcatgggcggtgagatcactattgaaggtgtagat
gacgagaaagacatggaggagactcgacggaccttctcacttctggggttgaatgaggac
tttcagtcagatgtgttcaaagttttggcagccattctgcatttggggaatatggaaatc
agaaactctggagacggaaaatcatcagttcctcccagtgatccccacctggcagttttc
tgtgagttgctggacgtgagcgcggaggagttgtcgcgttggctgtgccatcggaggatc
gttctggtggttgagacggtggtgaagccggtccccaaagagcgagctgtaaatgccaga
gatgccctagccaagcagatctatgcccacctgttcgactgtattattaacaagatcaac
acagcactgcaggttccaggaaagcaacatgctttcattggtgttctggatatttatggc
tttgaaacgtttgacatcaacagctttgaacagttttgtatcaactacgcaaatgagaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccgtggacgttgatagatttctatgacaaccagccggtcattgacctgattgaa
gcaaagatggggatcctggacttgcttgatgaagaatgtttgtttcctcagggcactgat
cgaagctggctgcaaaagctgttcaactatcttgatgccaatcccctgtttgagaagccc
aggttatcaaacgaggcatttgtgattcaacactttgcagacaaggtggaatatcaatgc
agaggttttctagaaaagaacagggacactctctatgaagaactgatcgacattctgaga
gatagtaagtttccttttctggccaactttttccgagaggaggagcaaagcactgtgaaa
actaaagcagtcaaagtgaggcccgccagacctgcagtgaaaccagccaataaacagctg
agaacctcagtgggagataagttctgcagctccctctctttactgatggaaaccctgaat
gctaccactcctcactatgtacgctgcattaagcccaacgatgaaaagctcccatttgaa
tatgactccaggagagtggtgcagcagctgcgggcctgtggagtccttgaaactattcgt
atcagtgcacagagctatccctccaggtggacatacattgagttttacagccgatacagt
atcctaatgtcacatcaggagggggacctcagtgacaagaaacagacctgcaagaacgtg
ctgcagaggttgatacaggaccccaaccagtacaagtttggtcggacaaagatcttcttc
cgagctggtcaggtagcttatctcgagaagctgcgtctggaccgactgagaggagcgtgc
gtgaccctccagaaacacgtccgcggatggagccagaaaaggaagtacctgcgcatgaga
gaggctgccatcatcctccaactgtacatccgcggaaagaggacaatccgtaaaacagtg
actgctgccacactgaaacagggatgggcaacactgatgatccagagatactggagaggt
taccgcatgagacagatcttccatgtagtccgtctggcctccatcaccatccaggctttc
acacgaggttggatggcccgtaaacgctacaagaagatgatggaggagcagaaagccctg
attctacagaagtatgccagagcatggctggcacggcggcgctttcagaccatgcgtcgg
ctggtgatcaacgttcagctctccttcagggtgcagcagctcagaaagaagattgatgag
cagaacaaagagaaccgtggattgatggaaagactcacaagcttggccaactcccactct
cacaccgtggacaagcttcagggtctggaggcacagctggaaaaatccaccaaccagaag
gtgtctttggaggcaagagagaagaaagcgaaagaagatgctagtctgacaactacacag
cttcaaaagaaaatagatgcactaaacctggaaaagcagaacgtggagaaacagtttgaa
gcttccaccaaagaggccaaagagagctttgatcatataaagaggaaccttctggaagag
aaagaacatgaagcaaggtttagaaaaattgcagagaacaacactgagatccagacacag
gaccatgagaaggaggtggaaactctgaaagaggagattaagagattgaaagaggagaga
gtcggtctgcagagaaaggtcgaggagggaggccaggtgaactctgacctggaggagcag
gtcgtccagctcaccaaacatgtcaaggccattcccgagctacgcagggatctcaacaac
ctgcaaaaccagagaaataacatggaccgaaagatgaagcaacagtcggaagaagcaaga
gctaaaatgaacgatatcacgagacaactactcggtggtgttgttgaagagactgttctt
ttgggactaactccagacgactctgagaagatctatgagtttgaagatttgctggcagcc
tttgatggccttcagaaagcctccagaatcctggaaagccaccagagggagcagaaggaa
cactttgagacccaagcggagggtttgaaaatgaaagttgaccaccttcaaaatgagaac
agcaagttgcaaaacctgttccaggagaaaagtaatgtaaacgagaacattcggcaagaa
gtgtcccggctcagcagtgaaaactcagttctaccggagctgaaactgcaagctttagag
ctgcagagacaaaaacaagaattggagacccacgtagaggagcagagcagagaactagca
gaaaaaactgaggagatcactaacgttcttcagaagaaggttaaagaagagagctcacaa
cgcaggcactttgaggagaaagctggagagctggaggagttgaagagtgaacttcaaggc
agagtggaggagctgggagaggagaacgatcacttgaagagacagctgctgatggagcgc
gaggccaagagcaaactgagacaggagacttcactgttaactgctgagaatatggacttt
gaagagcagctcgaccagaaagacagattattaaagaaactccagaatcaaataaagagc
cttgaaacatcacagaaagcgaagcaaacgtctgcacctgccattcccaaagactacctt
ggcatgttggagtacaagagagaggatgaatccagactcattcaaaacatcattctggac
ctgaagcccaaaggtgtggtggtcaatttgattcccagtctgccagcttacatcctcttc
atgtgcgtccgccacgctgactacctgaatgatgaagtcaaactcaagtctctaatgaat
gcgatcatcagcgctgtcaaaaaggtcatcatgagtcacctcaaagactttgacttgctg
tcattttggctctcaaacatgtatcagctgctcaactgtctgaagcagtacagcggggag
gaggagttcctgaaacaaaatactcctggtcagaaaaagaactgcttgcagaattttgat
ttgtctgaacacagacagattctcagcgacctggccattcaaatctaccatcagtttgtg
tcagtcatggaaaagaccctcactcctgcgattgtacccggtatgttggagcacgagagt
ttacaggggatttctagcatgaagccgacgggcgtcaggaagcgttccgacagcatctac
gacgactcagagacacacaccatctcctccatcgttcagcagctcagtgccttccactcc
accatgagccagcatggcatggagcagggcctcatcaaacaggctgtgaaacaaatgttc
tacctagttggtgcgacaactctcaacaacatcatgctccgcaaagacatgtgctcctgc
aggaaggggatgcaaatcaggtgtaacatcagttatctggaggaatggctgaaggagaag
gaactgcaaagctcaaacgctatagacactctgaggccgttgtctcaggccgcctggctg
ctgcaagtcaacaagtccactgatgacgacgccaaggagatcactgaacaatgcactgaa
ctcaaccctgtgcagattgtgaagattttgaactcttacactcccattgatgattttgag
aaaagagtgacgcccgcatttgtccgcaaagttcagtcattactacacgatcgtgagggg
tccacacagctgatgctgggctcagattatcgtttccaggtcacgtttcctttccgctcg
tcctcgcaggctctggagctgctgcaggtcccgagcagccttcacctgggtttcctaatc
agggtctga
DBGET
integrated database retrieval system
