Cottoperca gobio: 115009699
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Entry
115009699 CDS
T07513
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
cgob
Cottoperca gobio
Pathway
cgob04620
Toll-like receptor signaling pathway
cgob04621
NOD-like receptor signaling pathway
cgob04622
RIG-I-like receptor signaling pathway
cgob04623
Cytosolic DNA-sensing pathway
cgob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115009699 (irf7)
04621 NOD-like receptor signaling pathway
115009699 (irf7)
04622 RIG-I-like receptor signaling pathway
115009699 (irf7)
04623 Cytosolic DNA-sensing pathway
115009699 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115009699 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115009699 (irf7)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115009699 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
BDM
Motif
Other DBs
NCBI-GeneID:
115009699
NCBI-ProteinID:
XP_029289731
Ensembl:
ENSCGOG00000018982
UniProt:
A0A6J2PWP5
LinkDB
All DBs
Position
6:complement(11070083..11074314)
Genome browser
AA seq
432 aa
AA seq
DB search
MQSLPKPPFASWLIEQVGTGQYTGLRYESQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKINEFPNDKARWKTNFRCALNSLSLLFKMIMDNSKNSDDPHKIYEITKTEYNYENLPKQ
DSQEDCDMIPDIYDSTIEYLASGNEHILLNNFMALDLGNQPSDEQRWTQNYNQHNPAVTE
SYPVAAKNHPQLSYCEVNPPPVLSLPLQPSIYDLEISIHYRKKEMLKTTLATALLQLHYH
QEAPELNAHHLCFPSTECLLDQKQVEYTNCILSSIQRGLFLVVRDTGIYAWRQDRCHVFA
STSDPSVAHPNPSKLPQNTMVELLSFEKYVNELKQFKENNGRSPDYTINMCFGEKFPDGK
PLEKKLIVVKVVPLICRHFHEMAQMEGASSLHSANVSLQISHNSLYDLINSVFSLPTAEE
AARAAVPFLPQI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccttcccaagcctccgtttgccagctggctcatagagcaggtggggacgggc
cagtacacgggcctgcgctatgagagccaaaacaagttcagagtcccctggaagcacaac
tctaggaaggactgcaatgatgaggacagtaaaatattccgggcatgggcagtagcgagt
ggaaaaatcaacgagttccccaacgacaaggccaggtggaaaaccaacttccggtgcgct
ctgaacagcctctctttgctcttcaagatgataatggataattccaagaattctgatgac
cctcataaaatctatgagattaccaagactgagtacaactatgaaaatctgccaaaacaa
gactcccaggaggattgtgacatgattccagatatctacgactctaccatagagtactta
gcctcaggaaacgagcatattcttcttaacaatttcatggccttggatcttggcaaccaa
ccatcagatgagcaacggtggacacaaaactataatcagcacaatccagctgtcactgaa
agctatcctgtagcagccaagaaccacccacagctttcttactgcgaggtgaatcctccg
ccagtcctcagtttacctctgcagccaagtatatatgacctggagatctccatacactac
aggaaaaaagaaatgctaaagaccacgcttgcaactgcacttctccagctccactaccac
caggaggcccctgagctcaatgcccaccatctctgcttcccctccactgaatgtctgctg
gaccaaaaacaggttgagtacaccaactgtatcctgagcagcatccagagaggtctcttc
ctggtggtacgggacactggtatctatgcctggagacaggacaggtgccatgtgtttgcc
agcaccagtgaccccagtgtggctcacccaaacccaagcaagctgccccagaacaccatg
gtggagctcctcagctttgagaagtatgtgaacgaactgaagcagtttaaggagaacaat
ggccgctctcccgactacaccatcaacatgtgctttggagagaagtttcctgatggaaaa
cctttggagaagaagctcattgtagtcaaggtggttcctctgatctgtcgacactttcat
gagatggcacagatggagggggcttcgtctcttcacagcgccaacgtcagcctccagatc
tcacacaacagcctctatgatctcattaactctgtctttagtctaccgacagctgaagag
gcagcacgggctgctgtgccgtttctacctcaaatctga
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