Cottoperca gobio: 115009825
Help
Entry
115009825 CDS
T07513
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115009825 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115009825 (smarca5)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115009825 (smarca5)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
115009825 (smarca5)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
115009825 (smarca5)
RSF complex
115009825 (smarca5)
WICH complex
115009825 (smarca5)
B-WICH complex
115009825 (smarca5)
NORC complex
115009825 (smarca5)
BRF complex
115009825 (smarca5)
NuRF complex (fruit fly)
115009825 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
ERCC3_RAD25_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
115009825
NCBI-ProteinID:
XP_029289949
Ensembl:
ENSCGOG00000003682
UniProt:
A0A6J2PWZ5
LinkDB
All DBs
Position
1:4424614..4432560
Genome browser
AA seq
1033 aa
AA seq
DB search
MSDILNCVEQREEQTEVEEAGAAEEKSDSSDAGKESSSDVVPNVQHASSSSKSKETGVGY
EEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKNDEKQNLLSAGD
NRHRRTEQEEDEELLSESTKTTNICTRFDNSPSYVKQGKMRDYQVRGLNWLISLYENGIN
GILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAVCL
IGDREERNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKL
SEIVRQFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGDTKL
VERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSAGK
MDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKMKKQGS
RILIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINTYNEPNSSKFIFMLSTR
AGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVER
AEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDAILER
GERKTMEMKEKMSTLGESTLRNFTVDTENSSVYKFEGEDYREKKKVITNWIEPPKRERKA
NYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKV
PRNPDMANSAQLQKEEQGKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIKANEKW
GRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKA
LDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNS
PQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKNVSVQKRKSEA
TPDGRGRRKKLKL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatatcctaaactgcgtggaacagcgggaagagcagactgaagttgaagaagcc
ggggcagcggaggagaaatctgattcttcagatgctggaaaagagtcatcttcagatgtc
gtgcccaatgtacaacatgcttcctcatcttccaaaagtaaagaaactggtgtggggtat
gaggagaaagtgcaaacagaccggaccaacagatttgagtacctgttgaagcaaacagag
ttgtttgctcatttcatccaaccagcagcacagaagaccccaacctcccccctaaagatg
aagccaggacgtcctcgcatcaagaacgatgaaaaacagaacctgctgtctgccggagac
aaccgacatcgccgcacagagcaagaggaagatgaagagcttctgagcgagagcaccaaa
actactaatatctgcactcgctttgataactctccctcctatgtaaaacaaggaaaaatg
agagactatcaggtccgtggtctgaactggctcatctctttgtatgagaatggcatcaac
ggcatcctcgctgatgaaatgggtttggggaagactctgcagactatttcccttctgggt
tatatgaagcactacagaaacatccctggtccccacatggtgctggtgcccaagtctacc
ctctacaactggatgaatgagttcaagagatgggtgccttcacttcgtgcagtctgcctg
atcggagacagagaggagaggaatgcgctgatcagagatgtgctgctgcctggagaatgg
gatgtgtgtgtcacatcctacgagatgctcatcattgaaaaggcagtgttcaagaaattc
aactggagatacctggtcatcgacgaagcccacagaatcaagaatgagaaatcaaagctg
tcggagattgtgcgacaatttaagactaccaatcgtttgttgctgactggaactcccctg
caaaacaaccttcacgagctgtgggctctgctgaacttcctgctgcccgacgtcttcaac
tcagcagatgattttgattcctggttcgacacaaacaactgcttgggtgatacgaagttg
gtcgaacgtcttcacactgtgctgcgtcccttcttgcttcgtcgtataaaagctgacgta
gagaagactctgcttcccaaaaaagagatcaagatgtatgtgggcctgagtaagatgcag
cgagagtggtacacaaagatcctgatgaaggacattgacattctgaactcggcgggtaag
atggacaagatgcgtctcctgaacgttctcatgcagctgaggaaatgctgcaaccatccg
tacctgttcgacggggccgagcctggtcccccgtacactactgacctccacctggtggtg
aacagtggcaaaatggtggtgctggacaagctgctgcccaagatgaagaagcagggctct
cgtatactcatcttcagtcagatgaccagagtgctggacatcttggaggactactgcatg
tggaggaactacggctactgccgcctggatggccagacgccgcacgaggagagacagatc
tctatcaacacatacaatgagcccaacagctccaagtttatcttcatgttgagcaccaga
gctggaggactgggtatcaacctggctacagctgatgtggtcatcctgtacgactcagac
tggaacccccaagtcgaccttcaggccatggaccgagctcacaggattggtcagcagaag
caggtacgcgtctttcgcttcatcactgaaaacacggtggaggagaggattgtggagagg
gctgagatgaaactgcgcctggactccattgtcatccagcaaggaagacttgtggatccg
agcgcaaacaagctgggcaaggacgagatgctgtctatcatccgccacggtgccacgcac
gtgtttgcctccaaagagagtgagatcaccgacgatgacatcgatgccatcctggagaga
ggtgaaaggaagactatggagatgaaggagaagatgtctacactgggtgagagcactctg
agaaacttcaccgtggacacagagaacagcagtgtgtataaatttgaaggagaagattac
agagagaagaaaaaggtcattaccaactggatcgagccacccaagagagaaaggaaagcc
aattacgctgtggatgcgtacttcagagaggctctgagagtcagtgagcccaaagcacca
aaggctccacgtcctcctaagcagccgaatgtacaggacttccagttcttccctccacgt
ctttttgagcttctagaaaaggaaattctgttctacagaaagaccataggctacaaggtt
ccccgtaatccagacatggcaaattcggcgcagctccagaaagaagagcagggtaagatc
gacgaggccgaggctctcacagaggaggaactggaggagaaggagaacctgctgcaacag
ggatttaccatttggaacaaacgtgacttcaaccagttcatcaaagccaacgagaagtgg
ggaagagatgatattgagaacattgcgagagaagttgaggggaaaactccagaggaagtc
atggaatactctgctgtgttctgggagcgctgtaatgagctgcaggatatcgagaagatc
atggcccagatagagagaggagaggccaggatccagagaaggataagcattaagaaagca
ctggactcaaagattggtcgctacaaggctcctttccatcagctccgtatctcctatggc
accaacaaaggcaagaactacacagaggaggaggaccgcttccttatctgcatgctacac
aagctgggcttcgacaaggagagtgtgtacgacgagctgcgtcagtgcatccgcaactct
cctcagttccgcttcgactggttcctcaaatccaggactgccatggagctccagaggcga
tgcaacaccctgattacactgatagagagagagaacatggagctggaggagagggagaag
gctgagaagaagaaacgcggcccaaagaatgtctcagtccagaaacggaagtcagaggct
accccagatggtcgtggacgcaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
