Cottoperca gobio: 115009866
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Entry
115009866 CDS
T07513
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
cgob
Cottoperca gobio
Pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115009866 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115009866 (sf3b3)
03041 Spliceosome [BR:
cgob03041
]
115009866 (sf3b3)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115009866 (sf3b3)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115009866 (sf3b3)
Spliceosome [BR:
cgob03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
115009866 (sf3b3)
Complex B
115009866 (sf3b3)
Complex C
U2 SnRNP specific factors
115009866 (sf3b3)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
115009866 (sf3b3)
TFTC complex
115009866 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
115009866
NCBI-ProteinID:
XP_029290007
Ensembl:
ENSCGOG00000010201
UniProt:
A0A6J2PY52
LinkDB
All DBs
Position
6:6118679..6137679
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLIVIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGAGQWASLVRLINPIQGTTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVSGGFIYTYRLISGGEKLEFVHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVTDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNITIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESMVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcaccctgcagcgtgccacgggcatcactcatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccaggggaaagatattggaatta
ttgcggccagatgccaacacagggaaggtgcacactctgctcacagtggaggtgtttggc
atcgttagatccctgatggccttcagactcactggaggaaccaaagactacattgtcgtc
ggaagtgacagcggtcgtattgtcattctggaatatcatccatcaaaaaacatgtttgag
aaaatccaccaggaaacgttcgggaagagcggctgccggcgcatcgtccccggacagttc
ctggccgttgatccgaaaggcagagctgttatgatcggagcgatagagaaacagaagctg
gtttatattctgaacagagatgcagctgcaaggctgaccatctcctctccgctggaagcc
cacaaagccaacacactggtctaccacgtcgtaggagtcgatgtcggctttgaaaatccc
atgtttgcctgtctcgagatggactatgaggaagctgacaatgaccctacaggagaagct
gctgccaacacgcaacagacgctcaccttttacgagctggacctcggcttgaatcacgtg
gtccgcaagtacagtgaggctttggaggagcatggaaatttcctcatcactgttcctggt
ggttcagacggtccaagcggagttctgatctgctctgaaaactacatcacttacaagaat
tttggagaccagcctgacattcgctgtcccatcccgcgacgcaggaacgacctggatgac
ccggagcgtggcatgatatttgtctgctcagcaacccacaagaccaagtccatgttcttc
ttcctggcccaaactgagcagggagacatctttaaggttacgctggaaacagatgaagaa
atggtcacagaaatcaggctgaaatactttgacacgatccctgtggcgacggccatgtgt
gtcctgaagactggcttcttgtttgtgtcttcagaatttggaaaccattacctttaccag
atcgcccacttgggtgatgacgacgaagagcctgagttctcctctgcaatgccgctagaa
gagggagacacgttcttcttccaaccccgccccctcaagaaccttgtgctcgtggacgaa
caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagataca
ccacagttgtatgttgcctgtggacgaggaccccggtctactctgagggtccttagacat
ggactggaggtatcagagatggctgtgtctgagctacccggtaaccccaacgctgtgtgg
acagttcgcagacatgtggaagatgagtttgatgcctacatcatcgtatctttcgtgaac
gccactctggttctgtccatcggggagaccgtagaagaagtgacagattctggatttctg
ggaacgacgcccactctctcctgctcactgctcggtgaagacgccctggtgcaggtgtac
ccagacggtatccgccacatccgagcggacaagcgtgtgaatgagtggaagactcctggc
aaaaaaaccattgtccgctgcgctgtgaaccagcggcaggttgtcatcgcactcactgga
ggagagctcgtctactttgagatggacccgtccggccagctgaatgagtacaccgagcgg
aaggagatgtctgcagacgtggtttgtatgagcctggccaacgttccacccggtgagcag
cgctcaaggttcctggccgtgggactggtggacaacactgttcgaatcatctccctggac
ccttcggactgcctacagccgttgagtatgcaggccctgccagcccagccagagagtctg
tgtattgttgagatgggaggggtcgagaaacaggatgaacttggagaaaaaggaaccatc
ggcttcctctacctcaacatagggcttcagaacggtgtgctgctgaggactgtgctggac
ccagtgacgggtgacctgtcggataccagaacacgctacctcgggtcacgccctgtcaaa
ctcttcagagtcaggatgcaggggcaggaagctgtgctggcaatgtccagtcgctcctgg
ctcagctactcgtaccagtctcgcttccatctgacccctctgtcttatgagactctggag
tacgcctctggctttgcctccgagcagtgccctgaaggcatcgtggccatctccaccaac
acactgagaatcttggctttggagaaattgggagccgtcttcaaccaggtggcctttcct
ctgcagtacactcccaggaaatttgtaatccacccagagaccaacaacctcattgtaatc
gagactgaccacaatgcctacaccgaggcaaccaaagcccagagaaagcaacaaatggct
gaggagatggtggaggctgctggtgaagatgaacgagaactggccgctgagatggctgct
gccttcctcaacgagaatctcccagaagccatttttggtgcacctaaagccggagcggga
cagtgggcctcactggtgcgtctcatcaaccccatacagggtacaacactggaccaggtg
cagctggaacagaacgaagctgcattcagcgttgcggtgtgccgtttccccaacacagga
gatgattggtatgttctggtgggcgttgccagagacatgatcctcaaccccagatcagtg
agcggcggctttatctacacctatcggctcatcagtggaggggagaaactggagtttgtg
cacaaaaccccggtcgaggacgtgcctttggccattgctccattccagggtcgggtcctg
gtgggagtggggaaactgctgagaatctacgacctgggcaaaaagaagctgcttcgcaag
tgtgaaaacaagcacgttcccaacctggtgactggcatccataccatcgggcagcgtgtg
atcgtgaccgacgttcaggagagcctgttctgggttcgctaccgacgcaacgagaaccag
ctcatcatcttcgctgatgacacgtatccccgctgggtgaccacggcctgtctgctcgat
tacgacaccatggcctctgctgacaagtttgggaacatcaccattgtgcgtcttccaccc
aacaccagcgatgatgtggatgaagaccccacagggaacaaagctctatgggatagaggc
ctccttaatggagcatcacagaaggctgaggtgatcatgaactaccacgtaggagagacg
gtgttatcgctccagaagaccactctgatccctggaggttcagagtccatggtctacacc
actctgtctggaggcatcggcattctggtcccattcacctcacatgaggaccatgacttc
ttccagcatttagagatgcatatgcgctctgagttcccgccactgtgcggcagagaccat
ctcagctttagatcctactacttccctgtgaagaatgtgattgatggagatctgtgcgag
cagttcaacagtatggaccctcacaagcagaaaagtgtggcagaagagctggatagaacg
ccacccgaggtctctaagaaattggaggacattcgcactcgctacgccttctaa
DBGET
integrated database retrieval system
