Cottoperca gobio: 115010012
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Entry
115010012 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgob01001
]
115010012
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115010012
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115010012
Protein kinases [BR:
cgob01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
115010012
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115010012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Bromodomain
zf-RING_UBOX
PHD
zf-RING_5
PML_CC
zf-C3HC4_2
zf-C3HC4
PRANC
Motif
Other DBs
NCBI-GeneID:
115010012
NCBI-ProteinID:
XP_029290239
UniProt:
A0A6J2PXP8
LinkDB
All DBs
Position
6:complement(21815863..21826218)
Genome browser
AA seq
953 aa
AA seq
DB search
MDARAEKQEPGDDAAIVVENEAESKQVQEEKSGVSGQNQLDACPVCTLNFHSREPKLLPC
LHSFCKKCLPSPSRNLAMAEPPNSQVDSATKPLNVIRCPVCRQECMEVDVMENVFVKDSV
ETPSSTVEKAVQLCMTCDDNTEATGFCVDCVEYLCATCVEAHERVKFTKDHTIRQKAEIS
QEVRGVSTQRPVFCDIHKQEPLKLFCETCDLLTCRDCQLVKHKDHNYQFLEDAYKNHKQH
MESMTRQLQEKKKLIEEVSNSINNGLLQVDQNRTSVHNEIKKSICSLILEINKKGKMLVN
QLEAVTKDHESVLRKQHEDIGYLSRHLDHVINFTKWATARNGGTALLYCKRLILFQIGNL
LRAKCSTTFIPQSTVRFQNRSSYWASNVDLGSLVVESVPGHQLGGFQGIPHQLSLPGQGP
SGSPHSFALGAPHNTLAQLQMQVDKLNPQANWQPQPPPPPWTWYQSVQLQRTIPGPVQGG
SPSHSMLPQPGRRFMAPPPNYVSPTSSLPSPGFTPQPLRGMGSSYQRKPMDVFSSPPLYT
HITPLLINGGVGSPHSRQTIEPTHLNTRNDSSGPIYMRKPNYPQSLPPSLLHINVQGQQN
SLGYAAASQEEKSGTVTWKPPEPHQVSGTGGSAVKKRRRSSPGPIIVIKDEPDDDSSYLQ
ANQRASLPDSTGDRPQTSAPFQSTDDKPHSPSQLPRSPWDQSKTNAPNHLRPPGAEQQVD
VLEDSNKGLCAACRTGGELLCCHKCPKVFHLSCHVPTLLKCPSGEWFCSFCRDLLVPEMD
YDCENRPEAKTVKKEPDSEGGFAPADKRKCERLLLHLFCSKLSSDFQGPASPSVCASNRL
TIKGPMNLGDVKKRLEAKQSLCYPSPAEFLSDIRLIVGNCAVLGQADTEVTSAGRKLKEL
LEKHLRIIFPEHTFPEIKLEMTPTAHPXLSFLDNISQHAKRQPSCQLPEEGVV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacgcgcagaaaaacaggagccgggggatgatgctgccatcgtcgtagagaac
gaagctgagagcaagcaagtgcaagaggaaaagtccggtgtgagcgggcaaaaccaactg
gacgcttgccccgtttgcactttaaactttcacagccgagagcccaaacttctgccgtgt
ctgcactctttctgcaagaaatgtttgccttcgccctcgaggaatttggccatggcggag
ccgccaaactcccaggtcgacagcgcgaccaaaccactgaatgtgatccgctgtccggtg
tgcaggcaggagtgtatggaggtagatgtgatggaaaacgtctttgtgaaggactcagtt
gagactcccagcagcacagtggagaaggcagtccagctctgtatgacatgtgatgacaac
actgaagccacggggttttgtgtggactgcgttgagtacctctgtgccacctgtgtggag
gcccacgaaagagtcaaattcaccaaagaccacaccatcagacagaaggcagaaatatca
caagaggtacgcggtgtgtcgactcagaggccggtgttctgtgacatccacaaacaagag
ccactgaagctgttctgtgaaacctgcgacctgctgacttgtcgtgactgccaactagtc
aaacacaaggaccacaattaccagttccttgaagatgcttacaaaaaccacaaacagcac
atggagagcatgacccgtcagctgcaggagaagaagaaactgatcgaagaggtatcaaac
tccataaacaacggacttcttcaggttgatcagaaccgtacgtctgttcacaacgaaata
aagaaatccatctgcagtttgattctggagataaacaaaaagggcaagatgctagtgaat
caacttgaggctgttacaaaggatcatgagagtgtcctgcgaaaacaacacgaggacatc
ggctatctatccagacacctggatcatgtcatcaacttcaccaaatgggccacagccagg
aacgggggcacagcgctcttgtactgtaaacgtttgattctgtttcagattggaaacctc
ctgcgggcaaaatgcagtaccacgttcataccacagagcactgtacgcttccagaatcga
tcctcttattgggcctcaaatgttgacctgggctctttagtggtggagagtgtaccaggc
caccagctgggtggttttcagggtatccctcatcagctctccctccctgggcagggcccc
tcaggctcaccccacagctttgccctgggagcaccccataatactctggctcagctccaa
atgcaggtggacaagctaaacccgcaggccaactggcagccccaaccacctcctccaccc
tggacatggtaccaaagtgtccaactacagcgaaccatcccgggccccgtgcaaggaggc
tctccctcccacagtatgcttccccaaccaggccgcaggttcatggcgcctcctcccaac
tacgtcagcccaactagcagcttaccaagccctgggtttaccccccagcctctgaggggg
atgggaagcagctaccaacgcaaacctatggacgtattttcctctccacctctgtacacc
catataacgccactgctcatcaacgggggcgtcggttcgcctcattcacgacagacgatt
gagccgacacatctgaatacgaggaatgattcaagcggaccgatatatatgcgaaaacca
aactatccccaaagcctgccaccttctctgctgcacataaatgtgcaaggacaacagaat
tcactagggtacgctgctgcatcccaggaggagaaatcagggactgttacctggaaacct
ccagaaccgcaccaggttagtggaacagggggctcggctgtgaagaaaagacgaagatct
tcaccagggcccatcattgtcatcaaagatgagccagatgacgacagtagctacttacaa
gccaatcaaagagccagcctccctgacagcacaggtgaccgaccccaaaccagcgctcct
ttccaaagcacggacgacaaaccccatagtccttcacagcttccacgcagcccgtgggac
cagagtaagactaacgctccaaatcacctccgtccgccgggagcagaacagcaggtggac
gtgctggaagactctaataaaggcctgtgtgctgcgtgtcgcactggcggagagctgctg
tgctgtcacaagtgtcccaaggtttttcacctttcgtgccatgttccaactctcctcaaa
tgtcccagcggggaatggttttgctctttctgccgtgacctgttagtgcctgagatggat
tacgactgtgaaaacagacctgaggccaaaacagtaaagaaggagccagattctgaagga
ggatttgcccctgcggacaaacgcaagtgtgagaggctgttgctgcacttgttttgcagc
aagctgagttcggactttcaagggcccgcgtccccctcggtatgtgctagtaacaggctg
actataaaggggccgatgaatcttggcgacgtgaagaaacgactggaggccaagcagagt
ctgtgttacccaagccctgcagagttcctatcagacatcaggctcatcgttgggaactgt
gcagtcctcggtcaggctgacacagaggtcacctcggcgggcaggaagcttaaggagctg
cttgaaaagcacctgaggatcatcttccctgagcacacctttccagaaatcaaactggag
atgacgcctaccgctcatcctnaactctcatttcttgacaatatatcccagcatgcaaag
cgccagcccagctgtcagctcccagaggagggagtcgtatga
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