Cottoperca gobio: 115010302
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Entry
115010302 CDS
T07513
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115010302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115010302
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115010302
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
HECT type E3
115010302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
115010302
NCBI-ProteinID:
XP_029290712
UniProt:
A0A6J2Q0B0
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All DBs
Position
6:4545997..4558413
Genome browser
AA seq
1000 aa
AA seq
DB search
MFSWGEDSQRGFRLKHGSCINSPATADGRHVNLGYHVTDLSAAHNVLAFVKSNGNSFIIR
TNESKDGTRVRGKQKFVKCKEKIKAVSCGDDMVTLLSERGQVLCVDTTLIPRPLKALCNI
AVSQVACGSQHSVALTTDGQVYTWGQGSRGQLGLGKCKPNIDSPQHLRSLSAIPLVQVAA
GGEQSFALSVSGAVFGWGRNECGQLGLGDTTDRRTPTLVHCLNMKKTVHISCGKDHTAVL
TKDSAVFTFGSGKYGQLGHNSFSDELRPRLVAELWGAKVIKTACGRHHTLVLTDSKRVYS
FGCGEQGQLGHGEESHPSVPLPVQLPQDPTDDPKIRNIFAGGNCTFATCPSDEDVHEGAN
TDTVNKVTKSLDDMIDKWTAECDSKSWKKIKLEIHRMFSSASCVNTSFLEQSNDKHFQTS
TKYSGLNLSFARHAFKKLVQKDNVFAEVEAAVLHLVPSLDEKPVGVEGLRIFLLLNELLH
AIQTHKQERTSIKLAEAVAAAVINLSADSLQVIADWWASQPSSTMVKHVKVWKQALSVIL
SYQPVPRNSGVRNLLRVLQYMYNANSRTAEPQRMPESDFYLLIDKDFLIEDLHLWRLRSQ
YKNVHHQPLILCSFPAVMDLESKKFVFDLNANCTKLEAVDFFWEFDVQFFEVEVKRASVL
KDAFEHLASADHSDYKYPLMVDFDETYTVNDDISLSRKDFFYEVFHEMVSAETGMFIYND
SETLAWFPSRATQEDQRYFHFGVLCGLALYNQCIIHLPFPLALFKKLLGAKPSLEDMMEF
SPSLGKRLQNILDYTDDVIEILYMDFSINWDGTDVELDPENPGKPMTGQNKKQFVDAYVS
HAFNKSVEGVFQEFKRGFFQVCDQDLVKLFQPKELQEVLVGKSFHDWAKLKQATGYEGEY
NTTPPHPTIQMFWEVFDDLTEDQKKAFLWFVTGFERVPILDMEKIKMTVTVQNVPDGSYD
QYHPETHTCFSVLELPLYSTKEIMHTRLTEVLSSNKRIFK
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggacagtcagcggggcttccgtctaaaacatggctcatgtatc
aacagtccggcaacagctgatggtcggcatgtgaacctcggctatcacgtcacagatctg
tctgcagctcacaacgtgctcgctttcgtcaaaagcaatggcaactcgttcatcattcgc
acaaatgagagcaaagatgggacaagagtcagaggaaaacagaagtttgtgaagtgtaag
gagaagatcaaggcagtgagttgtggtgatgatatggtcacactgctgtctgagagagga
caagttctctgtgtggacacgactctcattccaaggcccctgaaagctttgtgtaacata
gcagtttctcaggttgcttgtgggagccagcattcagtcgccctgaccacagatggtcag
gtgtatacatggggccagggctccaggggccagctgggtctggggaagtgtaagcccaac
atcgattctccccaacacctccgatctctgtcagcgatccccctggtccaggtggctgca
gggggagagcagagcttcgccctctctgtctccggagctgtgttcggctggggcagaaat
gagtgtggacagctcgggctgggagacacaacagacaggcgtacaccaactcttgttcat
tgtctgaacatgaagaaaactgttcacatttcctgtggaaaggaccacactgcagtgttg
acaaaggatagtgcagtgtttacatttggttctggtaaatacggacagcttgggcacaac
tcattcagcgatgaactacgacctcggcttgttgcagagctctggggggcaaaggtcatc
aagactgcttgtggacgccatcacacattagtgttgaccgactccaagagggtctactcc
tttgggtgtggagagcaggggcagctgggacatggagaggagagtcatccgtcagtgccg
ctacctgttcaactgccacaggaccccactgatgatccaaagattagaaacatctttgca
ggaggaaactgtacgtttgcaacgtgcccgtctgatgaggacgttcatgagggggcaaac
actgacactgtcaacaaagtaacaaagtcccttgatgacatgattgacaaatggacggct
gaatgtgactcaaagtcatggaaaaagataaaactggaaattcacaggatgttttcctct
gcatcctgtgtgaatacaagcttccttgagcaaagcaatgataaacatttccagacttca
acaaagtactctggcctgaacttgtcatttgcgcgacatgctttcaaaaaactggtacaa
aaggacaatgtttttgcagaggttgaggctgctgtcctgcacttggtaccctcccttgat
gagaagccagtgggagtggaggggttgaggatctttctgcttcttaatgagcttctgcat
gcgatccagacacacaaacaggaacgaacaagcataaagctcgctgaggcggtcgctgct
gctgttataaacttgtctgctgacagcctccaggtcatagcggactggtgggcctcacag
ccatcctccaccatggtgaaacatgtcaaggtgtggaagcaggccctctcagtgatcctg
tcctatcagcctgttcctcgcaactcaggagtcagaaacctgctgcgagtcctccagtat
atgtacaacgccaacagcaggactgcagaacctcaacggatgccagaaagcgatttctat
ttgttgattgacaaagactttcttattgaggatctgcatctttggcgtttacggtcacaa
tacaagaatgtgcatcatcagccacttatcctttgtagctttccagctgtgatggatctg
gagtcaaagaaatttgtttttgacttgaatgctaattgcaccaagttggaagcagtggat
ttcttttgggaatttgatgtccagttttttgaagtagaagtgaagcgagcatcggttttg
aaagacgcctttgaacatctggcttctgctgatcacagtgactacaagtatccactcatg
gttgattttgatgaaacctacaccgtgaacgacgatatcagcttatcaaggaaagacttt
ttttacgaagtgtttcacgagatggtgtcagctgaaactgggatgttcatatacaatgac
tccgaaacactggcatggttcccatccagagcaacccaggaggaccagaggtacttccac
tttggggttctgtgtggattggctttgtacaaccagtgcatcatacacttacccttccca
ctggctctgttcaagaagctgctcggtgcaaagccttcactggaggatatgatggaattc
agcccaagtctcggaaagcgtctgcagaacatcctggactacacagatgatgtcatagaa
attctctacatggatttttcaatcaactgggatgggacagatgttgaacttgatcctgaa
aatcctggaaagccaatgacaggtcaaaataagaagcagtttgtggatgcctacgtgagt
catgccttcaacaaatcagtggagggtgtgtttcaggagttcaagcggggcttcttccag
gtgtgtgaccaggatctggtgaagctcttccaaccaaaggagctgcaggaagtgctggtg
ggcaaaagcttccatgactgggcaaagctgaaacaggccacaggttatgagggggagtac
aataccaccccaccacaccccaccatacagatgttttgggaggtttttgatgatctaact
gaggatcagaagaaagctttcctttggtttgtgactggatttgaaagggtccctattcta
gacatggaaaagatcaagatgacagtcacagttcaaaatgtcccggacggctcctacgac
cagtaccaccctgagacacatacatgtttctcagtcctggagctgcccttatactcaacc
aaggagatcatgcacaccaggctgaccgaggttctgagcagcaataaaagaatcttcaag
tga
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