Cottoperca gobio: 115010308
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Entry
115010308 CDS
T07513
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115010308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115010308
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115010308
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
HECT type E3
115010308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
115010308
NCBI-ProteinID:
XP_029290720
UniProt:
A0A6J2PZ00
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Position
6:4559628..4571858
Genome browser
AA seq
990 aa
AA seq
DB search
MFSWGEDPQQGFRLRDGSNISTGDGVHFLNLSFHITDLSAGNSVIAFNKSNGDASTIRTH
ESKDGRRVRGKQKFVKCKEKIKAVSCGDDMVTLLSERGQVLCVDTTLIPRPLKALCSIAV
SQVACGSQHSVALTTDGQVYTWGQGSRGQLGLGKCKPDTNSPQNLRSLSAIPLVQVAAGG
EQSFALSVSGAVFGWGRNECGQLGLGDTTDRRTPTPVHYLNMKKTVHVSCGKDHTAVLTK
DGAVFTFGSGKYGQLGHNSFSDELRPRLVAELWGTKVIKTACGRHHTLVLTDSKRVYSFG
CGEQGQLGHGEESHPSVPLPVQLPQDTINGSMIRNIYAGGNCSFATCAPVQEAHEESNTD
PVTQDSIDDMIDKWVSKCDPTSWKKTKQEIHRTFSSASCMNQTFLDQSKDKHFQTSPKYS
GLNLSLVQRAFEKLGKNDDVLTKVEAAVLHLLPSLDKKPVGVEGLRIFLLLNDLLHVIQR
HKLRSSTNLAEAVAAAIQRLSAESLQVIVDWWASQPSSTMVKHVKVWKQALSVILSYQPV
PRNSGVRNLLRVLQYMYNANSRIAGRKRLPEKTFGLEVGQQFLQEDLQLWRSMSKIKPLI
ICNFPFVMNLKSKKMAFDMNATCTMKEQQAKMNWCLGWAFEPNQFFELKLKRASLLEGTF
EQLAAAQHSAFKKPLVVYFDEDPKITDVYKRDLFHHLFHEMVSTKSEMFTFNTPKRLAWF
SSTATEQDKTNSFLFGFLCGLALYNQCIIHLPFPLALFKKLLDVEPTLEDMMEFNPSVGK
ILQYVLDYEDDEEDLHMSFLINWDGIDVDLDPQNPEKPVTGQNKKAFVDAYVSHAFNTSV
EGVFQEFKRGFFQVCDQDLVKQFRPEELQGVLVGQDVYDWEKLKKNTVWECSLGFRTMPM
FWEVFDELTEDQRKDFLRFLTGFRRAPILGMDQVQMKVQLKQLQSGQHYDQLFPESLTCH
SILYLPLYSSKQIMRDRLTNALMKERGFLM
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatggggagaggaccctcagcagggtttccggttgagagatggttcaaatatc
tcaacaggggatggggttcactttttaaacctcagttttcacatcactgacctgtcagct
ggtaacagcgtgatcgccttcaacaaaagtaatggagatgcatccaccattcgcactcat
gagagcaaagatggaagaagagtcagaggaaaacagaagtttgtgaagtgtaaggagaag
atcaaggcagtgagttgtggtgatgatatggtcacactgctgtctgagagaggacaagtt
ctctgtgtggacacgactctcattccaaggcccctgaaagctttgtgtagcatagcagtt
tctcaggttgcttgtgggagccagcattcagtcgccctgaccacagatggtcaggtgtat
acatggggccaaggctccaggggccagctgggtctggggaagtgtaagcccgacaccaat
tctccccaaaacctccgatctctgtcggcgatccccctggtccaggtggctgcaggggga
gagcagagcttcgccctctctgtctccggagctgtgttcggctggggcagaaatgagtgt
ggacagctcgggctgggagacacaacggacagacgtactccgactcctgtccattacctg
aacatgaagaaaacggttcacgtttcctgtggaaaggaccacactgcagtgttgacaaag
gatggtgcagtgtttacatttggttctggtaaatacggacagcttgggcacaactcattc
agcgatgaactacgacctcggcttgttgcagagctctgggggacaaaggtcatcaagact
gcttgtggacgacatcacacattagtgttgaccgactccaagagggtctactcctttggg
tgtggagagcaggggcagctgggacatggagaggagagtcatccgtcagtgccgctacct
gttcaactgccacaggacaccattaatggttctatgattagaaacatctacgcaggagga
aactgttcgtttgcaacgtgcgcgcctgttcaggaagctcatgaagagtcaaacactgac
ccagtaacccaggattcaattgatgacatgattgacaaatgggtctctaaatgtgatcca
acatcatggaaaaagacaaaacaggaaatccacaggaccttttcctctgcatcctgtatg
aatcaaaccttccttgaccaaagcaaagataaacatttccagacctcaccaaagtactct
ggcttgaacttgtcacttgtgcaacgtgctttcgagaaactggggaagaacgatgatgtt
ttgacaaaggttgaagctgctgtcctgcacttgcttccttcacttgataagaagccagtg
ggcgtggagggattgagaatcttcctgcttctcaatgatctcctgcacgtgatccagaga
cataaactgcgatcgagcacaaacctcgctgaggcggtcgctgctgccatacaaagactc
tctgctgaaagtctccaggtcatagtggactggtgggcctcacagccatcctccaccatg
gtgaaacatgtcaaggtgtggaagcaggccctctcagtgatcctgtcctatcagcctgtt
cctcgcaactcaggagtcagaaacctgctgcgagtcctccagtatatgtacaacgccaac
agcagaattgcaggacgtaagagactcccagaaaaaacgtttggtttggaggtcggccaa
caatttcttcaagaagatctgcagctttggcgttccatgtcaaaaatcaagccacttatc
atttgcaacttcccatttgtgatgaatctgaaatcgaagaaaatggcgtttgacatgaat
gctacatgcactatgaaagaacaacaggcaaagatgaattggtgtttgggatgggctttt
gagccaaatcaattttttgaactgaagctgaagcgagcgtcacttttggaaggcaccttc
gaacaactggctgctgctcaacacagtgccttcaagaagccacttgtggtctattttgat
gaggacccaaagatcacagatgtctacaaaagagacctttttcaccacttgtttcatgaa
atggtgtcaactaaatctgagatgttcacgttcaacacccccaaaaggctggcatggttt
tcctccacagcgacagagcaggacaagacaaactccttcctgtttgggtttctgtgtgga
ttggccttgtacaaccagtgcatcatacacttaccattcccgctggctctgttcaagaag
ctgctggatgtagagccgacactggaggatatgatggaattcaacccaagtgttggaaag
attctgcagtatgtcttggactatgaagatgacgaagaagacctgcacatgagttttttg
attaactgggatgggatagatgttgaccttgatccccaaaatcctgaaaagccagtgaca
ggtcaaaataagaaggcgtttgtggatgcctacgtgagtcatgccttcaacacatcagtg
gagggtgtgtttcaggagttcaagcggggcttcttccaggtgtgtgaccaggatttggtg
aagcagtttcggccagaggagctgcagggagtgctggtgggccaagatgtctatgactgg
gaaaaactgaaaaagaacacagtgtgggaatgtagtcttggcttccgcaccatgcctatg
ttttgggaggtttttgatgaactgactgaagaccagaggaaagatttccttcggttcctg
actggttttaggagggctcctattcttggcatggaccaggtccagatgaaggttcaactt
aagcaactccagagcggtcagcactacgatcagctcttccctgagtctttgacatgtcac
tctattctgtacctgcccttatactcatctaagcagatcatgcgagacaggctgacaaat
gccctgatgaaagagagaggattcttgatgtga
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