KEGG   Cottoperca gobio: 115010707
Entry
115010707         CDS       T07513                                 
Symbol
col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
cgob  Cottoperca gobio
Pathway
cgob04510  Focal adhesion
cgob04512  ECM-receptor interaction
cgob04518  Integrin signaling
cgob04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115010707 (col9a3)
   04518 Integrin signaling
    115010707 (col9a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115010707 (col9a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115010707 (col9a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cgob00535]
    115010707 (col9a3)
Proteoglycans [BR:cgob00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   115010707 (col9a3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 115010707
NCBI-ProteinID: XP_029291300
UniProt: A0A6J2Q117
LinkDB
Position
7:complement(5020108..5036498)
AA seq 678 aa
MTVFSALWVLLLCQLLTSSSAQRPGPRGAPGPAGPTGPPGRDGTDGKDGPAGLMGKSGPK
GKAGISGEAGKPGLPGLPGVDGLTGPDGPAGKDGPGGEAGDSGPAGPPGSPGRGRPGAAG
LPGTNGLPGGLGPQGAVGAEGIPGLPGPSGSDGPPGFPGTLHDLSGDLLCPAICPSGPSG
PSGMPGFKGHTGHKGDKGELGKNGEKGDAGPSGPPGIPGTVGLQGPRGLRGLQGPMGSVG
DRGLPGFRGKHGIAGIIGKTGDVGEHGPQGFRGPKGEIGKFGPKGGPGGSGPKGEPGIPG
RDGKDGTPGLDGEKGDAGRHGVVGEKGPNGLPGLQGKGGSKGSKGGVGDPGKAGETGPSG
EPGIPGDIGVPGERGIAGPRGVAGGIGLVGNSGPQGVKGFQGVNGALGDPGLPGPTGIRG
EFGERGPVGAYGAKGDMGVAGSDGLPGENGEPGPFGPVGQKGESGTRGELGPKGVPGPQG
ELGARGPPGKTGVMGFQGEQGLPGISGKTGVPGKLTSEQHIRELCGSMIDDQIAQLAANL
RRPLAPGMVGRPGPVGSSGKTGVAGSYGHPGSRGPPGYRGLPGELGDPGPRGQVGEQGDK
GTVGKAVDGPAGDQGYQGLPGVAGIVKDGRDGSPGDPGEPGESGRVGRTGHLGTPGICDT
SACQGASVAGKSSNPKNH
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgactgtgttctctgcgctttgggtgctcttactgtgccagcttttgacatcatcctca
gcccagaggccgggccccagaggagctcctgggccagcaggacccacagggccaccggga
agggatggcaccgatggtaaagatggacctgctggactgatggggaaatcaggtcccaaa
gggaaagcaggaatatcaggggaagcaggaaaaccaggcctgccaggacttccaggagtg
gacggtttgacaggccccgacggtcctgctgggaaggatggacccggaggggaagcaggg
gactccggacctgccgggccgcctggatctcctggcagagggagaccaggagctgcagga
ctacctggaaccaacgggttgccaggcggactcggaccccagggtgccgtgggtgctgag
ggtattccaggacttcccggaccttcgggctctgatggaccaccaggttttcctggtact
cttcatgatcttagcggtgaccttctgtgtcctgctatctgcccttctggtccctctggt
ccttctgggatgccaggattcaagggtcacacagggcacaaaggagacaagggagagctt
ggaaagaatggagagaagggtgacgctggtccatctggcccaccaggtattccagggact
gtgggtctgcagggcccacgtggtctccgaggtttacaaggcccaatgggatccgtagga
gacagaggcctgcctggtttcagaggcaaacatggcatcgctggcatcattggaaagaca
ggtgatgttggagaacatggaccacagggattcagaggacccaaaggagaaattggtaaa
tttggtcccaaaggaggtcctggaggatccggacctaagggggaacctggtattcctggc
agagatggaaaagatggcacaccaggattagatggtgagaagggtgatgctggacgccat
ggggtagttggagagaaaggaccaaacggacttcctggtctacaaggaaagggtggttca
aaggggtctaaaggaggagttggtgatccggggaaggccggggagacgggaccctctgga
gagccaggtattcctggtgatatcggcgtcccaggagagagggggatagcaggacccaga
ggagtggctggaggtattggactagtgggcaactctggacctcagggagtgaaaggtttc
cagggggtgaacggagcgttgggggatccaggtcttccaggtccaactggaatccgtgga
gagtttggtgaaaggggtccagttggagcttatggagctaaaggagacatgggtgtggca
ggaagtgacggtttaccaggagagaatggagaacctggtccttttggcccagttggacaa
aaaggagagtcaggaacgcggggggaattgggacctaagggcgtgccaggtccacaagga
gagcttggggcacgagggcctccagggaaaaccggagtaatgggcttccaaggggagcag
ggtctgcctggaatttcaggaaagacaggtgtacccggtaaactgacgagtgagcagcac
atcagagagctgtgtggctcgatgatcgatgaccagattgcacagctggcggctaacctt
cgaagacccctggcccctggaatggtgggccgccccggccctgtagggtcttcaggaaag
acaggagttgctggctcttatggacatccaggttcccgtggaccaccagggtacagaggt
ctaccaggagagcttggagaccccggtcccagaggtcaagttggtgagcagggcgataag
ggaactgttggcaaagctgttgatgggcccgctggagaccaaggatatcagggtcttcca
ggagtagctggaattgtcaaagatgggcgtgatggatctccaggagatccaggtgagcct
ggagagtcaggcagggtaggtaggactgggcacctgggaacacctggaatctgtgacaca
tcagcctgccagggagcatcggtcgctggaaaatcctccaaccccaaaaaccattaa

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