Cottoperca gobio: 115010846
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Entry
115010846 CDS
T07513
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115010846 (clstn1)
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Cadherin related
115010846 (clstn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
Toxin_R_bind_N
EphA2_TM
Cadherin_C_2
TMEM132_C
SMP_2
PFF1_TM
DUF7502
Motif
Other DBs
NCBI-GeneID:
115010846
NCBI-ProteinID:
XP_029291546
Ensembl:
ENSCGOG00000017920
UniProt:
A0A6J2Q1I3
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All DBs
Position
7:12551578..12588597
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AA seq
981 aa
AA seq
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MRVRGNTQFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDLPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRANI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPNGMVSTSLKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNVEFPNVSLFVDGTTFEPFL
VTEDYPLHSSKIESQLTIGACWQDNSGHDNDTESVSEPTSGGNARMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASSVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADAESEAAEGADDDPTVQETVVSEEIMHNLDT
CEVSVVGDELDGEHEGLEVDMSQLQQHSLEMSSSNLGLVITGVNTMANYEQVLHLIHYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMMQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATVVIVVCVSFLVFMIILGVFRIRAAHQRTMTDQESGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtccgagggaatacacaatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggatcgagacgacgtaccac
gggatcgtaacggaaaacgatgacaaagttcttctggaccttcctctaattgcactggac
aaggatgctcctctacgctacgcagagagttttgaggtgactctcactgaagaaggtgag
atttgcggcttcaggatccacgggcagaatgtccccttcgaggcagtggttctggacaag
tccactggcgagggggtcatccgggccaaggacaagctggactgcgagctgcagaaggag
cacaccttcaccatccaagcctacgactgtggagagggtcctgatggcgccaacatgaag
aaatcccacaaggccactgtccacatccaggtgaacgacatcaatgagtattcaccagtg
ttcaaagagaagtcctacaaagccactgttattgagggaaagaagtatgacagcatcctg
aaggtggaggcagtggatgccgactgctctttccagtttagtcaaatctgcaactacgag
attgtcacccctgatgtgcccttcaccgtcgacaaagatggcttcatcaagaacacagag
aaattgagctacggcaaagagcgcatgtacaagctgactgtgaccgcctacgattgtgga
aagaaccgtgcctccgaggatgttctggtcaagatcagcgtcaagcccacctgcaaaccc
agctggcaaggattcaataagaggattgaatatgagcctggcacaggtagcctggccctt
ttccccagcatgcacttggagacctgcgatgagccaatcacgtccatccgagccaacatt
gaactggaaaccaaccatattgggaagggctgtgaccgtgatacctactctgagaagtcc
ctgcacaagctgtgtggagccagctccggcaccgtggagcttctgcctgcacccagcagc
tccgccaactggacggtcgggctgcccacagacaacgggcatgacagcgaccaggtgttt
gagttcaatggcacccaggccatcaaggttcccaatggcatggtgagcaccagcctaaag
gagcccttcaccatctcagtgtggatgagacatggccccggggcccacgagaaggagacc
atcctctgcaactctgacaagacagagatgaacagacaccactactcgctgtacgtccac
aactgcaggctgatccttctcctccgccaggatccctcagaggcagagaactacaagcca
gccgagtttcactggaaacttgaccaggcgtgcgacaaagagtggcatcactatgtgctg
aatgtggagttccccaatgtgtctctgtttgtggatggaactacctttgagcccttcctg
gtaacagaggactacccactgcactcctccaagatcgaatcccagctcaccattggtgcc
tgctggcaagacaattcaggacatgacaatgacactgagtcagtctctgagcccacctca
ggtggaaatgctcgaatggctcagtttttccggggcaacctagcggggcttatgatccgc
tctggcaagctggagaacaagaaagtgatcgactgtttgtacacctgcaaggaaggactg
gacgtgcagctgcctgaggaggtagcttcatctgtaaaggttgagttcaaccccaaccag
tcctctctgacagtggagggcgacgacattgatgcctttgacaaggtcatgcagcacatc
tcctacttgaactcccgccagttcccgacccctggcatcaggcaccttcgcatctccacc
accgtcaaatgcttcaacgaggagtcctgcgtaacagtgcccgatgccgaaggttatgtg
atggtgctgcagcccgaagagcccaagatcagcctgagcggcatcgaccactttgctcgc
agcgctgccgaatttgagagccaggaaggggtgacgctgttccccgagctacgcatcgtg
agcaccatcactcgcgaagtggaggccgacgccgagtctgaagcggcagagggagctgat
gatgaccctacagtccaagagacagtggtgtcagaagagatcatgcacaacctggacacg
tgtgaagtgagtgtggtgggagacgagctggacggggagcacgagggtctggaggtggac
atgtcccagctgcagcagcacagcctggagatgagttcctctaacctgggcctcgtcatc
accggtgtgaacaccatggccaactacgagcaggtcctgcatcttatccattacaagaac
tggcacaccgaggctctctttgacaggaaattcaaactggtctgctccgaactcaacggc
cgctacatcagcaatgacttcaaggtcgaggtgaacgtaatccacacagccaatcctgtg
gagcacgccaacaatgccatgatgcagcccaacttcattaaccccgtgcatcatgcctct
gtggatctgtccggtcacaacctggtcaacgctcaccaggcctcagttgttcccagcgct
gccaccgttgtcattgtggtgtgcgttagcttcctggtgtttatgatcatcctgggcgtg
ttccgcatccgagctgcacaccagcgcaccatgacagaccaggagagcggcaaggagaac
gagatggactgggacgactcagccctcactatcaccgtcaatcccatggagacgtacgag
gatcagcacagcagcgaggaggaggaagaagaggaggaggagagtgaggacggagaggag
gaagatgacatcacaagtgctgagtcagagagcagcgaagacgaggagggtggagagccg
gaggaccagcagggggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactaa
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