KEGG   Cottoperca gobio: 115010892
Entry
115010892         CDS       T07513                                 
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
cgob  Cottoperca gobio
Pathway
cgob03018  RNA degradation
cgob03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115010892 (lsm6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115010892 (lsm6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115010892 (lsm6)
   03041 Spliceosome [BR:cgob03041]
    115010892 (lsm6)
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115010892 (lsm6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     115010892 (lsm6)
Spliceosome [BR:cgob03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    115010892 (lsm6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 115010892
NCBI-ProteinID: XP_029291681
Ensembl: ENSCGOG00000007273
UniProt: A0A6J2Q1W1
LinkDB
Position
1
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAIEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKV
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagtttgagaaagcagaccccgagtgactttctgaagcagataattgggagacctgtg
gtggtcaaactgaactctggtgtcgattacagaggtgtcctggcctgccttgatggttat
atgaacattgccatagagcagactgaggagtatgtcaacgggcagctcaagaacaagtat
ggagatgcttttctaaggggaaacaatgtcctttacatcagcacccagaagaggaaagtg
tag

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