Cottoperca gobio: 115011361
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Entry
115011361 CDS
T07513
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115011361 (dhx35)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115011361 (dhx35)
Spliceosome [BR:
cgob03041
]
Complex C
Other components
Complex C specific factors
115011361 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
ABC_tran
AAA_22
Cas3-like_C_2
AAA_19
nSTAND3
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
115011361
NCBI-ProteinID:
XP_029292356
Ensembl:
ENSCGOG00000020936
UniProt:
A0A6J2Q3R2
LinkDB
All DBs
Position
7:complement(8033533..8041703)
Genome browser
AA seq
699 aa
AA seq
DB search
MAAPLSTMKFWKPGSEAPGISEERELNTETTGSPIIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQLPQYLLEAGWATEGKVIGVTQPRRVAAISVANRVAE
ERGALVGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNESGDPSKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARSLS
RYGMKKHLRILPMYSGLTFAEQMKVFERTPPSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPSTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRSNMAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVYGFFSNAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTA
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctttccacgatgaaattttggaagccggggtctgaggctccggggatc
tcagaggagcgggagctcaacacagagaccaccggctcccccatcatcttcaacccacac
acagccctctccatagagaaacaacgccagaaactccccgttttcaagcacagaaacaac
atcttatacctggtggagagcttccagactgtcattatagttggtgagacaggatgtggg
aagacaacgcagttacctcagtacctgctggaggctggctgggcaacggaggggaaagtg
attggagtgacacagcctcggcgtgtggctgctatctctgtagctaaccgtgtagcagag
gagcgaggggccctggtgggacatgaggtgggctacaccattcgatttgatgactgctct
gatcctcacgccacaaggatcaagttccttacagatggcatgctggtgagggagatgatg
gctgatcctcttttgaaaaaatacagtgtgttgatgctagatgaagcacatgagagaacc
ctgtacacagacatagccattggtctactaaagaagattcagaaaaagcggcgagacctg
aggctgattgtggcctctgccactctggatgccaagaaattccacgacttctttaacttg
aacgagtccggggatcccagcaaggacacgtgtggaattctgacagtggagggacgcacc
tttccagtggacgtcttctacactgtcagtcctgtcccagactacgtgaaggccacagtg
gagacagtgctgaagatccatgagacggaggacgacggagatgtcctggcttttcttacc
gggcaggaagaggtggagaaagtggtgtcccttctgcaggaccaggccaggtctctgtca
cgatacggcatgaagaaacacctgagaattttgcccatgtactctggtctaactttcgct
gagcagatgaaggtctttgagaggacgcccccctctgttcgcaaggttgtcgtggccact
aacatagctgagacgtccatcactataaacggagttgtatttgtcattgactgtgcattt
gtgaagctgcgagcgtataaccccagcactgccatcgaatcgctggtggtaactcccatc
tctaaggcttcagccagccagagggctgggagagccggacgcaaccgacctgggaaatgc
ttcagactatacacagaggaggactttgagaaactgcctgcctctactgtgccagagatg
cagcgctcaaacatggcccctgtcatcctgcaactcaaagcattaggcattgacaacgtg
ctgcggttcagcttcctttctcctcctccagctcagactatggttcaggctctagagctg
ctctacgctctgggaggcctggaccattacggacgtttgactgatcccatgggtgtgcgg
atggcagagtttcctctcagccccatgtttgctaagatgctcctcgagtcaggaaacttt
ggctgctccaaagagattgttaccattgcagcaatgatgcagattcagaatatatttgtt
gtgccgcccaatcagaagaaagctgccgcccgagagcacaggaaatttgcagtagctgag
ggagaccacctcaccatgctgaatgtgtatgaagcattcatcaagcaccagaagagctcc
cagtggtgtcaggaacacttcctcaattataagggtctgctgcgggctgtgactgtgcga
gagcagctccggcgtctcatgaacaagttcaaggtgccacggacttccagtgaaggtgac
cctgatgtgatcttgaagtgcattgtatatgggtttttctctaatgcagcccgcattcac
cattctggttcctaccggactttacgagacgatcgtgagcttcacatccaccccaactct
gtgctgtttggggagaaacctccaaaatgggttgttttcaatgaagtggtacagacggca
aaatactacatgcgcgacgtgactgctgttgagtcttcctggttggtcgagttggcccct
cacttttacaagcaggccaagcatggttcactggctagcaagaggtcccgggtcctctga
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