Cottoperca gobio: 115011683
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Entry
115011683 CDS
T07513
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50-like
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115011683
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115011683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Apolipoprotein
RING_XB3-XBAT31
zf-Nse
Prefoldin
Motif
Other DBs
NCBI-GeneID:
115011683
NCBI-ProteinID:
XP_029292745
Ensembl:
ENSCGOG00000016179
UniProt:
A0A6J2Q5H7
LinkDB
All DBs
Position
1:26627358..26650340
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AA seq
550 aa
AA seq
DB search
MPRIYKRKINWGSTPLEEMERAASDVKVLLVVLVLFLVVLLLVVLVLVVKVLGISVDMER
RQSLEDQLRCPVCLDVFTEPLMLQCGHSYCRCCVRSMTMDLLGQLQCPVCRCSVDGDSPP
PNVSLARIIEALQEVNVSGGAQPESCPQHHNPLSLYCEDERSVICGLCGSIGAHRGHKIT
PVSSVYSRMKEDISCLMTEFQHQKRKLEDQICKMAYNKSRITNESDVLKWVVRKEFGELR
RCLEVEEAGFMQQVETSAAILISSLQNQTDQLNLNLNRLQEAQNTLQDLSNEGHLDFIMK
YGSIAPRFREIQELQQKEERIFSSLNFKTDFNHNDIKLTVWKRLQRKVLPVPELLRLDPQ
TAHPMLELHHGDTVVGCGALLRRLPDNPERFSYSYCVLANRGFTSGKHYWEVEVANKPKW
RLGLIKGTTNRKAKLGKSPESGVWLIGLKDGVYEAFTLPRVVLPVTSPLRRLGLFLDYEG
RALTFYNSTSPDELSFIYSFRLEVQGKVYPLLDVCWHDRGHNKQPLVLPQPHREHLQHPL
VLPQPKKQVM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaatctacaagaggaaaatcaactggggctcaacaccccttgaagagatggag
agagcagccagcgatgtcaaggtgttgctggtggttctggttctgttcctggtggttctg
ctcctggtggttctggtcctggtggtcaaggtgttggggatcagtgtggacatggagcgt
cgtcagagtctggaggatcagctcaggtgtccagtctgtctggacgtcttcactgaacca
ctgatgttacagtgtggacactcctactgcaggtgttgtgtgcgctcaatgacgatggat
ctgctcggtcagctgcagtgtcctgtgtgtcgctgttctgtggacggagacagtcctcct
cccaatgtcagtttggctagaatcattgaggctctgcaggaagttaatgtttcaggagga
gctcagccggagtcgtgtcctcagcatcacaacccgctcagcctttactgtgaggacgaa
cgatcggtgatctgtggactctgtggaagcatcggtgctcaccgcggacacaaaatcaca
cctgtgagctccgtctacagccgcatgaaggaggacatttcctgtctgatgacagagttc
cagcatcagaaacgtaaactggaggatcagatctgcaaaatggcgtacaacaagtccagg
atcacaaatgagtctgacgtgctgaagtgggtggtgaggaaggagtttggtgaactgcgg
cgctgcctggaggtggaggaggcggggttcatgcagcaggtggaaacatcagctgcaatc
ctcatctcttccctgcagaaccagacggaccagttaaacctgaacctgaaccggctgcag
gaggcccagaacaccctgcaggacctgagcaacgagggtcacctggacttcatcatgaag
tacggatccattgctccgaggttcagagagattcaggagctccagcagaaggaggagaga
atcttcagctctctgaactttaaaactgacttcaaccacaatgacattaaactcactgtg
tggaagagactgcagagaaaagtcctaccagttccagagctgttgaggctggatcctcag
actgctcaccctatgttggagctccatcatggggacacggtggtgggctgtggggctctg
cttcggaggcttcctgataatccagagaggttcagttacagttactgtgtcctggccaac
cgaggcttcacttctgggaaacactactgggaggtggaggttgctaacaaacctaaatgg
cgtctcggtttgatcaaaggaacgaccaatcgtaaagccaagctggggaagagtccagag
agtggagtgtggttaattggactgaaggatggggtttatgaagccttcactttacccagg
gtagtcctgccggtgacatctcccctccgccggctgggactcttcctggactatgaggga
agagctctgaccttctataacagcaccagtcctgacgagctaagcttcatctacagcttc
aggcttgaggtccaggggaaagtctaccccctgctggatgtctgctggcatgaccgagga
cacaacaaacaacccctggtcctcccccagcctcacagggagcacctacaacaccccctg
gtcctcccccagcccaaaaaacaagtgatgtaa
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