Cottoperca gobio: 115011813
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Entry
115011813 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115011813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115011813
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115011813
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
HECT type E3
115011813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
115011813
NCBI-ProteinID:
XP_029292939
Ensembl:
ENSCGOG00000001152
UniProt:
A0A6J2Q5C4
LinkDB
All DBs
Position
1:4006345..4028909
Genome browser
AA seq
1048 aa
AA seq
DB search
MLCWGNAKDGQLGIGMERNPMFEPRNCYVFIGRGLKEVACGGQHSMFLLHDGSVYTCGSN
CCGQLGHDKPGNSPELVGALDTQTIRMVSSGRAHSMAVNEQGQVFAWGAGEEGQLGLGTA
EVAVRIPRLVKRLCDHRISQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGESSKLFP
HPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS
QKVVHISCGDEHTAALTKDGGLFTFGEGSWGQLGHGSTNNELLPRRVLELMGTEVSQITC
GRQHTLAFVPSSCVVYAFGCNSHGQLGTGIPGDARSPFPVKSSFLTGNFHRTESKQYTVT
KIICGGDHSFLLYSNEQSFVPPEDFRVMNVSRTISPINYERLNSWRLKLMYNTDSSVTND
IIIQLSSTACWNASFLDQSDDTHFRTNPKIAGIDLNSVRKLFETLSKPAFSGLLEQATKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPVLLDSKNYIRLTIPLAMAILRLDANPGKVLD
NWWCFVDGSVFTRMVDMYKSIVVFMLTGGKTLLVPVFYENYFVATLRLLEKLHKVNLKAR
HVEYNRFYIPDITTLVDIQEDYLKWFLSRADIKQSSSPSQSDFPSVNLCAYPFILNAQAK
TTMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDKCF
VEQNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVSPTLEDFKELSPTEARSLQQLL
DYEGGDVEEMFLLNFAITRENYGMTEVKELVPGGESISVDRNNRKEFVEAYLRYVFSDSV
SEQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIAIQSTTAEEHYLPVAHTCYNLL
DMPRYQTKETLRRRLTRAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaaaggatggacagttgggtattggtatggagaggaacccc
atgtttgagccaaggaactgctacgtgttcattggcagggggctgaaagaggtagcatgt
ggagggcaacactcaatgttcctgctgcatgatggcagtgtgtacacatgtggttctaac
tgctgtggacagctgggccacgacaaaccagggaattccccagagcttgtaggagctctg
gatactcagacgataaggatggtgtcgagtggtcgggcccattcaatggcagtgaatgaa
cagggtcaagtgtttgcgtggggagccggtgaagagggccagctcggcctggggactgca
gaggtggctgtccgaatcccaaggttggtcaaaaggctgtgtgaccaccggatctctcaa
gtaatgtgtgggaatcagcactgcattgcactttctagagacggccagctgttcacgtgg
ggccagaacaccagcgggcagctcggcctcgggaaaggagagtccagcaagctgttccct
catcccctgaagtctctggcgggtattcctttggcacagataacggccgggggtgaccac
agctttgctctctccttgtccggagctgtatttggttggggcaagaacaaagctggacaa
ctgggtctcaatgataaacaagatcgagctgtcccatgccacatcaagtttctgagatct
caaaaagttgttcacatcagctgtggagatgaacacacagctgccctcacaaaggatggc
ggcttgtttacatttggtgaaggctcgtggggtcagctgggtcatggttccaccaataac
gaacttctacccagacgagtgctggagctcatgggcaccgaggtgtcccagatcacctgt
ggcaggcaacacacgttggcgtttgtgccttcctcttgtgtggtgtatgcatttggttgt
aacagccatggccagctgggcacaggaataccaggagatgccagaagcccatttcctgtc
aagtccagtttcctgactggaaatttccatagaacagaatcaaaacaatataccgtgacc
aaaatcatctgcggaggagaccacagcttcttattgtactctaatgagcagagttttgtc
cccccggaagacttcagagtgatgaatgtcagtagaacgatctccccgatcaattatgaa
agattaaattcgtggaggttaaagctgatgtacaacacagattccagtgtgacaaatgat
attataattcaactgtcctctacggcttgttggaacgccagcttcttggaccaaagtgat
gatacgcactttagaaccaacccaaagatcgcaggcatcgatctcaactctgtccgaaag
ctttttgagacactcagcaaaccggccttctctggacttctggagcaggccaccaagagt
tttgagagtctgttgatccctcagctgccgcgctcccctcctgacgtcgaggccatgagg
atctacctcatattatctgagtacccggtcctgctggactccaaaaactacatccgcctc
actatccccctggcaatggccatcctccggctagacgccaaccccggcaaagtgttagat
aactggtggtgttttgtggacggcagcgtgttcaccagaatggtcgacatgtacaagagc
atcgttgtgttcatgctgacggggggcaagacgctgctggtaccggtgttctacgagaac
tattttgtcgccacactaagactgctggagaaactccacaaggtaaacttaaaggcccga
catgtggagtacaaccgcttttatatccctgacatcaccaccctggtggacatccaggaa
gactacctcaaatggtttctgagtagagctgacatcaaacaatcatcctccccttcacag
agtgactttccctcagtgaacctatgtgcctacccgttcatactgaacgctcaagccaag
acaaccatgctgcaaacagacgctgaactgcaaatgcagatggcagtgagcggagcaaac
ctacacaacgtcttcatgctgctcacgctggaaccccacctcgctaggaacccttacttg
gtgctccatgtgcgcaggaaccatttagtaagtgacacactacgtgagctcaccatgtac
tccgacgtggacctgaagaaaccgctcaaggtgatctttgatggagaggaggccgtggac
gcaggtggagtaactaaagagttcttcctgctgctgttaaaggagctgatggatcctgtt
tatgggatgttcactcattacaaagagtccaacctgctgtggttctcagacaaatgtttt
gtagagcagaactggtttcacctgatcgggatcatctgcggtctggccatctacaactcc
accgtggtggacctgcacttcccgctggttctctacaagaagctgctcgacgtgtcccca
acgctggaggacttcaaggagctctcgcccaccgaggccaggagtctgcagcaacttctc
gactatgaaggaggtgatgtggaggagatgtttcttctcaactttgctatcaccagagag
aactacgggatgacagaagtcaaagagctcgttcctggaggagagagcatcagcgtggac
agaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctcagactcggtg
agcgagcagtactctgccttctcttcgggcttcctgaaggtgtgcgggggggagatcctg
tcgctgttccagccctctgagctgatggcgatggtggtcggcaacaacaactacaactgg
gaggagatggagaagaacgctgtttacaaaggggaatacacagccactcatccaaccgtc
agattgttctgggaggttttccacgagttccctctggagaagaagaagcagttcttattg
tttctgaccggcagcgaccgtatccccatccacggcatggagagcttgcgtatcgccatc
cagtccaccacagcggaggagcactacctgccagtcgcacacacctgctacaacttgctg
gacatgccccgctatcagaccaaagagaccctgcgccgtcgtctcactcgggcagtggag
cagtacgagggcttcagcctggtctga
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integrated database retrieval system
