Cottoperca gobio: 115012080
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Entry
115012080 CDS
T07513
Name
(RefSeq) ATP-dependent RNA helicase DDX39A-like
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115012080
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115012080
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115012080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115012080
NCBI-ProteinID:
XP_029293380
Ensembl:
ENSCGOG00000023561
UniProt:
A0A6J2Q7E3
LinkDB
All DBs
Position
8:complement(17899444..17905579)
Genome browser
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGAPESAAPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSTVKAAVFFGGMAIKKDEDVLKKNCPHIVVGTPGRILALIR
NKTLALKNVKHFVLDECDKMLEQLDMRRDVQDIFKITPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaatgatgttgataacgagctgctcgattatgaagaagatgaggagcctcaa
ggagcccctgagagcgcagcccccgcaggaaagaaggaggtgaagggctcctacgtttcc
atccacagctctggcttcagagatttcctgctcaaaccagagctgctccgtgccatcatt
gactgtggttttgagcatccgtctgaagtccagcatgaatgcatcccgcaagctatcctg
gggatggacatcctgtgccaagcgaaatctggtatgggcaagacggccgtgtttgtgctg
gccacgctgcagcagattgaacctgttgatggacaggtgtctgtattagtcatgtgccac
acacgagagctggccttccaaatcagtaaagagtacgagcgtttctccaagtacatgtcc
acggtaaaggcagcagtattctttggcggcatggccatcaagaaggacgaggatgtcttg
aagaagaactgccctcatatcgtggtcggaacgccgggccgcatcctcgctctcatccgg
aacaagaccctcgccctgaagaacgtcaagcactttgtactggatgagtgtgacaaaatg
ttggagcagctagacatgagacgtgacgttcaggacatcttcaagattacaccccatgag
aagcaggtcatgatgttcagtgccacactgagtaaggagatccgaccagtctgccgcaaa
ttcatgcaggatcccatggaagtctttgttgacgacgagaccaaacttacactccacggc
ctgcaacagtactactgcaagctgaaggacagtgagaagaaccgcaagctctttgacctg
ctggacgtgttggagttcaaccaggtggtgatctttgtcaagtcagtccagcgctgtgtc
gctctggcacagcttctggtggaacaaaacttccctgccatcgccatccacaggggaatg
gctcaggaggagaggctgtctcgctatcagcaatttaaggacttccaaaggcggatcctg
gtggccactaacctgttcggccgagggatggacattgagcgggtcaatatcgtcttcaac
tacgacatgcctgaagattctgacacctatttgcacagggttgcccgtgctggtaggttt
gggaccaagggcctggctatcaccttcgtgtcggacgagaccgatgccaagactctgaac
gatgtgcaggatcgctttgaagtcaacgtggcagagctgccagatgagattgacatctcc
tcttacatcgagcagtccagatga
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