Cottoperca gobio: 115012199
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Entry
115012199 CDS
T07513
Symbol
rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115012199 (rbbp6)
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115012199 (rbbp6)
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
U-box type E3
115012199 (rbbp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-CCHC
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
115012199
NCBI-ProteinID:
XP_029293532
UniProt:
A0A6J2Q838
LinkDB
All DBs
Position
8:14807823..14824694
Genome browser
AA seq
1688 aa
AA seq
DB search
MTHVHYKFSSKLSYDTVVFDGLHVTLRDLKRQIMGREKLRAGDCDLQITNAQNKEEYTDD
EGSIPKGSSVIVRRIPIIGGKSSSHKTRHIERSDLQTNHAFGAFKAMDDQNSSRAVPFFT
KMANLADVDVSEEDKIKVMMNQSAFDLNYNKKFTAGLPANYTCYRCGSTGHHIRNCPTSG
QDKNLETPVRIKKSSGIPRSFMVEVDDPSIKGAMLTSCGRYAVPAIDAEAYAIGKKERPP
FVPQENPQSEDEEDPVPEELLCLICHDLLSDAVVIPCCGNSYCDDCIRTALLDSEEHVCP
TCSQSDVSPDTLIANKFLRQAVDNFKKERGFAKSLKRGSGASQSQNPTPTPSPAPTPSPL
TVQSQPPKPFLSINRQQDPLRHNSQAVDTPPSSQVCGATPTATSPASSPSTSLQPVQSIL
ETPNKEAEEKTHGDTADAAAAPSVPVSPKDPTDAPSKLIPLVELTPVGEQPQTVSVNLQP
LPSGPPPRPPGPSTCWESSSSPSGCPTGGWTQPNTQKRPPSSSSYPATPPPPLFPSPHFH
TFLTAPQPLSPYPPGYPPAVWTLPNLQGAPIPSLCPSTAIPALIPKEWYRHQKKKERSPH
RGSSHRRSSSRSNSKSSNSKSSRSYSRSSSRSRSRSRSRSQGRSRPHSSYSHHRDPPTRS
NSSHSYSYGYKRSPTPSSSSSPRVAYHSRSKSPSDHRKNSHHSRHHNKKSSSSSHDSRRR
GEHHGSGGSLASNMYAQHANQSSSLDLDRERYLQWKGEYKEWCDKYFSSYVGHFHQMPLP
LLNLLRPPQWGNREESGHPLHANSDSHNQLQGRRTARLDGRSPPSQSSSDSRSPPSQSSR
YRRSTPSQSSSDSHSSPSHSSSDSRSPPSQSSSDGRSTPSEDGAQPRASQQSRTEKYSRL
PIAFPKGSEEVDLQEGCKDKLITKNLENRSSLKHEQKSMKKYEKDRKEESDSTEDCRKEK
RRHNPGTKACKGGSPARDEATASDALESARPLLKPDKRLDKDYERKRREQNNSEMEKGCR
RGEHSDSRKDVGRRHREKPKKEAGRVDTDRYRDPGGSRASDSRSEKNRKRKREDTERGFV
KAQSSKCLKDPETPKSESPNPFDRKKPKMEKKMDRKPWPLTERDIWEGGIKVKPQKKISI
NINLEGKMKDESVTGKTQSEIDAGNRTEIEANEKKESSRDMEGVSGEQIKPEGEARQKWE
KATFRDDAGEEKDIGEKKDVREKEDFDVWHSPRREVEEESKKQWDERDGMAASKGEEVTN
DRRRSVRRGKEGQATGELVAETREERAEGESPFKVNRGNLPGESKPEEAPMEGGKWREEG
DTMRSKSQKGRNKGRHDGPKTALDGGSYEDLQEKKTEVTTLEEYTQDRAADQEDKLVVTQ
VPRSKWEKEKSEEGAIEVQADALATFLPSPSMSVTAETATTIETDHGGKRERAVEIERGR
YREREKTPILSTSQSSVAPSSGRDRTDRDGEKRMDRRRDRERERERSRNRPKESKRSKER
TREGETGREQGRFASAPKRNPPSSSHSYSYSYSMSHDTERKDRQREGDPVGKFSGGSSRE
NGVISRATKLPDEKVHKTYRDTLLGSNFKDKDHTHNDQEEGGRELEEGERRSSRSNSTSS
SASRENGRGDGRKEKKQKKHKQEKRQAAPELLKKQKLEKKTSKKSRDGRGEESSGEEDDA
KLCSVMLS
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgttcattataaattctcctccaaactcagctacgacacggtggtttttgac
ggcctccacgtcacgctgagggatctgaagaggcagatcatgggcagggagaagctccga
gccggggactgcgacctgcagatcacaaatgcacagaacaaagaagagtacacagatgat
gaaggttcgatccccaaaggctcctcggtcatcgtcaggagaatcccaatcatcggagga
aagtccagctcacacaagacccgccacattgagcgatcagacctccagactaaccacgcc
tttggagccttcaaagcaatggatgaccagaattcttccagagctgtaccctttttcacc
aagatggctaacctggctgatgtggatgtgtcagaggaggataagatcaaagttatgatg
aatcagtccgccttcgacttgaattacaacaagaagtttactgctggacttcctgcgaac
tacacctgttatcgctgtggaagtactggacaccacatcaggaactgtcccaccagcggg
caggataaaaaccttgagacccctgtgagaataaagaaaagctcaggcatccctcgttcc
ttcatggtagaggtggacgatcccagcataaagggagccatgctgactagctgtggacgt
tacgcggttcctgccatagatgctgaggcgtacgccattggcaagaaggagaggcctccg
ttcgttccacaggagaaccctcagtcagaagacgaggaggatcctgtgcccgaggaactc
ctctgtctcatctgtcatgacctgctgagcgacgccgtggtcataccctgctgtggaaac
agctactgtgacgactgtattcgcactgccttactggattcagaggaacatgtctgcccc
acttgtagccaatcagatgtctcacctgataccctgatagccaataaatttctccgacag
gctgtggacaattttaagaaagagcgaggcttcgctaaaagtctgaaaagagggagtggt
gcgtcacaatcccaaaatccaaccccgacgccgagccctgcccccaccccgtcccctctc
accgtgcagagccaaccgccgaagcctttcctgtcgatcaacagacagcaggaccctctc
cggcacaactcgcaggctgtagacacacctccatcgtctcaggtgtgtggggctacgccc
acagcaacaagccccgcctcttctcccagcacttccctccagccggtgcaaagcatcctg
gaaacacccaacaaagaggctgaagaaaagacgcacggcgacacggcggatgctgccgcc
gccccgtctgtaccggtttcacccaaagacccaactgatgctccttcaaagctgatccca
ctggttgaacttacaccagtgggagagcagccccagacggtcagtgtaaatctacagccg
ctcccctcaggtccacccccaagaccccctgggccgtcaacgtgctgggaaagctcctct
tccccctcaggttgtcccactggaggctggactcaacctaacacccagaagcgtcctccc
tcctcctcttcatatccagcaactcctcctcctcctctatttccctccccccatttccac
acattcctcaccgctccgcagcctctcagcccttacccccctggatacccacctgccgtc
tggacactcccaaacctccagggtgcccccatcccttccctgtgtccctctaccgccatc
cctgccctcatccccaaggagtggtacaggcatcagaaaaagaaggaaaggtcacctcac
agaggatcttcccacagacgctcctcttctcgttctaattcaaagtcttctaattcgaaa
tcttctcgctcctactctcgctcttcaagcaggtccagatctcggtccaggtccaggtcc
caaggcagatcaagaccccactcatcttactcccaccacagggacccccccacccgctct
aattcctcccactcctatagttatggttacaaacgttctcctacaccgtcctcgtcttct
tcacctcgagtggcttaccattccaggtccaagtccccgtcagatcaccgcaaaaacagc
catcacagtcggcaccacaataagaaatcgtcttcgagcagccacgactccaggaggcga
ggtgaacatcacggctcagggggaagtttagctagtaacatgtatgctcagcatgcaaat
caaagtagcagcctggacctggacagagagcgctacctgcagtggaaaggcgagtacaaa
gagtggtgtgataaatatttcagcagctatgtcggccatttccaccagatgcctcttccc
ctcctcaatcttcttcgtcctcctcagtgggggaacagagaagaaagcggacatccctta
cacgctaactcggactctcacaaccaactccaaggtagacgcaccgcccgactggacgga
cgctcccctccatcgcagtcatccagtgacagccgctcccctccgtctcagtcttcacgt
tacagacgctccacgccctctcagtcatccagtgacagccactcctctccgtctcattct
tccagcgacagccggtcccctccctctcagtcgtccagcgacgggcgctcaacaccatcc
gaagacggagctcagccgagggcaagtcagcagagtcgcactgagaagtacagccgcctg
ccaatcgcatttccaaagggcagtgaggaagtggatctgcaagaaggatgcaaagacaag
ctaatcaccaagaatttggagaaccgcagcagcttaaaacatgagcaaaagagcatgaag
aaatatgagaaagatagaaaagaggagtcagactcgacagaggactgcagaaaggagaag
aggaggcacaaccctggaacaaaggcctgcaagggtggcagcccagcacgggacgaagca
actgccagtgatgccttagaatctgcccgacctctcctgaaaccagataaacgtttggat
aaagactatgaaagaaaacgcagagaacaaaataattcagaaatggagaaaggatgtaga
agaggcgaacattcagactccaggaaggatgtggggagacggcaccgagaaaagcccaag
aaagaggcaggcagagtggacacggacagatacagagaccctggaggaagcagagcttct
gactccagatcagagaagaatagaaaaagaaaacgagaggacacggagagaggttttgtg
aaggctcaaagcagcaaatgccttaaggaccccgaaacccccaagagtgaatccccaaat
ccatttgacagaaagaagccaaagatggagaagaaaatggacaggaaaccctggcctttg
acagagagagacatctgggagggagggataaaggtaaaaccacagaagaagataagcatc
aacataaacctggaagggaaaatgaaggatgagagcgttacaggaaaaactcaatcagaa
attgatgctggtaatagaacagaaatagaagcaaatgaaaagaaggaatccagcagagac
atggaaggtgtgtctggagaacaaataaaaccagaaggagaggcaagacagaaatgggag
aaagctaccttcagggatgatgcaggagaggaaaaagacattggagagaagaaagacgtc
agagaaaaggaggactttgacgtatggcatagtccccgcagagaagtggaggaggagagt
aaaaaacagtgggatgaaagagacgggatggcggccagcaaaggagaagaggtgacaaat
gacaggaggaggagcgtgaggagaggaaaggaaggacaagcgaccggagagttggtcgca
gaaacccgggaggagagggcagagggagaaagcccattcaaggtaaacagaggaaacttg
ccgggggagtcaaaaccagaggaggcgccgatggagggagggaagtggagggaagaagga
gacactatgaggtccaagtcccagaagggcagaaacaagggccgccatgacggaccgaaa
actgcgttggacggtggcagctatgaggatcttcaggagaagaagacggaggtgacaaca
ctggaggaatacacccaggacagagctgcagaccaagaggacaagctcgtagtcacacag
gtccctcgctccaaatgggaaaaggaaaaatctgaggaaggagcaatcgaagttcaagcg
gatgctcttgcaacatttctgccttcaccgtccatgtctgtgaccgctgagacagcaacc
accattgaaacagatcatgggggaaagagagagagggcagtggaaatagagagaggaagg
tacagggagagagagaaaactcccattttgtccacttcacagagtagtgtggctccctct
agtggcagagaccgaactgacagagacggggagaagaggatggatagacggagggacagg
gagagggagagggagagatcgaggaataggcctaaagagagcaaacgatcgaaagagaga
acaagggagggagagacagggagggagcaaggcaggtttgcctcggccccgaagaggaat
cccccttcctcctctcactcctactcctactcttattcaatgtcacatgacacagagagg
aaagacaggcagcgagagggcgacccagtcgggaaattctccggtggcagcagcagggaa
aacggcgtgataagcagagctaccaaactgcctgatgaaaaggtccataagacgtataga
gacacgttactgggctcaaactttaaagacaaagaccatacccacaatgaccaagaagag
ggagggagagagctggaggaaggggagaggcgcagcagccgcagcaacagcaccagttcg
tcagctagcagggagaacggcaggggcgacgggagaaaagagaagaaacaaaagaagcac
aaacaggagaagaggcaagccgccccggagctgctgaagaaacagaaactcgagaagaag
acgtcaaagaagagcagagatgggagaggagaggagagtagtggagaggaggatgacgcc
aagctctgctcagttatgttgtcttga
DBGET
integrated database retrieval system
