KEGG   Cottoperca gobio: 115012329
Entry
115012329         CDS       T07513                                 
Symbol
pold1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
cgob  Cottoperca gobio
Pathway
cgob03030  DNA replication
cgob03410  Base excision repair
cgob03420  Nucleotide excision repair
cgob03430  Mismatch repair
cgob03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115012329 (pold1)
   03410 Base excision repair
    115012329 (pold1)
   03420 Nucleotide excision repair
    115012329 (pold1)
   03430 Mismatch repair
    115012329 (pold1)
   03440 Homologous recombination
    115012329 (pold1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgob03032]
    115012329 (pold1)
   03400 DNA repair and recombination proteins [BR:cgob03400]
    115012329 (pold1)
Enzymes [BR:cgob01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     115012329 (pold1)
DNA replication proteins [BR:cgob03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    115012329 (pold1)
DNA repair and recombination proteins [BR:cgob03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      115012329 (pold1)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     115012329 (pold1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2 divDNApol
Other DBs
NCBI-GeneID: 115012329
NCBI-ProteinID: XP_029293754
Ensembl: ENSCGOG00000006275
UniProt: A0A6J2Q7K0
LinkDB
Position
8:complement(13171594..13184472)
AA seq 1105 aa
MDFKKRNGGPYIGGASQAKRGKPASEWEDSPSQFEEELSMFDEAEMESEEMEGQAGHDVI
PVDDLFSANLNPRWRRPHAASLDPSADTLVFQQIDLDYYLGEKVAGMPGQSQGKTPIIRM
FGVTDSGNSVCCHVHGFAPYFYVPSPSGFTSDDLGEFKRELNAVVLKDMRSNKDNISVTV
LAVDISRKENMYGYHGKRSQDFLRITMAMPRLIAPAKRLLEQGFKFGPFPIQGYQSYEAN
IDFEIRFMVDSDVVGCCWIELPKSKYRVREEKSTGEADTRYPGKASLCQYEVDVGWTDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPXIQIASMVQRQGETEPFIRTVFT
LQSCASIIGSQILCFTQEKLLLESWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAVLKAK
HFSYLGRVRGITSVLRDLNFQSKQMGRRENKIINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVIKTEAGEDYTGATVIEPEKGYYSI
PITTLDFSSLYPSIMMAHNLCYTTLLQKGSAERQSLSPEDFIKTPTGDMFVKSSVRKGLL
PEILENLLSARKRAKDELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTISNGYQGDAKVIYGDTDSVMVKLGVATVREAMDIGK
EAAEWISSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSCADTHEKMDCKGIETVRRDN
CPLVANLINTCLQKCLIDRDPQGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
RQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIFVLENSIPIDTQY
YLEQQLSKPLLRIFEPILGESKAENVLLKGDHTRCKTVLTSKIGGLMAFAQKRSTCIGCK
AVLKTDAAVCAFCKKKESELYQKEIFHLNTLEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSNLVNRFGW
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggattttaaaaaacgcaatggcggcccttacattggcggtgcgtcccaggccaaacgg
ggtaaaccggctagtgaatgggaggacagtccatcgcagtttgaagaggaattgtccatg
tttgacgaagcagagatggagtcggaggagatggaggggcaggcagggcatgatgttatt
cccgtagatgacctcttctcagcaaaccttaaccctcgttggcggcggcctcatgccgct
tcactggacccgtcagctgatactttggtgtttcagcagattgatcttgactattattta
ggggaaaaggtggctggcatgcctggtcagtcacagggaaaaaccccgatcattcgaatg
tttggcgtgacagacagtggcaacagcgtgtgttgccacgtccacggttttgcgccttac
ttctatgttccttcaccaagtgggttcacgtctgatgacctgggtgaatttaaaagagaa
ttgaacgctgttgttctgaaggacatgcgatccaataaggacaacatctccgtcacagtg
ttggctgtggacatcagccgcaaagagaacatgtatggttaccatgggaaacgcagtcag
gattttttgaggataacgatggcgatgcctcgtctcatcgccccagctaagagactgctg
gagcagggcttcaagtttggacctttccccatccagggttaccaatcctatgaggccaac
atagattttgagataaggtttatggtggacagtgatgtggtgggatgctgctggattgaa
cttcccaaaagcaagtacagagtgcgtgaagaaaaaagcacgggggaggcagatactcgg
tacccaggcaaggcgtccttatgtcagtatgaggtggatgtgggatggacagatttgata
agtcaccctgcagagggagactggcagaggatcgcccccctcagggtgctcagttttgac
atcgagtgtgcaggaagaaaaggaatcttcccagaagcagacaaagaccctngtattcag
atagcgtctatggtgcagcggcagggtgagacggagcccttcattcgcaccgtgttcact
ctccagtcctgtgccagcatcattggctctcagatattgtgctttacacaggagaaactg
ctactggagagctgggctgagtttttgaggacagtggacccagacatcatcactggatac
aacatccaaaactttgacttcccctacttgctcaacagggcagctgttttaaaggcgaaa
cacttttcctacctcggccgagtgcgaggcatcacgtcagtcttgcgagacctaaacttc
cagagcaagcagatgggccgcagagagaacaagatcattaacatggagggccgggttcag
tttgatctactgcaggttctcctcagggactataaactgcgatcgtacacactgaacgct
gtgagtttccacttcctgcaagaacagaaggaggatgtgcagcactccatcatcactgat
ctgcagaatggcaacgaacagactcgtcgtcgtttggctgtctactgcctgaaagacgcc
tacctcccactgcgcttgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgaccggtgtgcctctcacctacctgctctcaagaggacagcagatcaaagtcgtc
tctcagctgctgcgacaggccatgaaacaggacctggtcatgcccgttataaagacagaa
gcaggagaagactacactggagcgactgtcattgagccagagaaagggtattacagcatt
cctattaccaccctggatttctcctccttgtatccgtccattatgatggctcacaatctg
tgctacaccaccctgctgcagaaaggctcagcggaaagacagagcctctcaccagaggac
ttcatcaagactcccactggtgatatgtttgtgaaaagctctgtgaggaaaggacttctc
cctgagatcctggagaacctgctgtctgcgaggaagagggccaaagacgagctgaagaag
gagactgaccccttcaagcggcaggtgctggacggccggcagcttgccctcaaaatcagc
gcaaactcagtctatggcttcacaggtgctcaggtgggcaagctgccctgcctggagatc
tcacagagcgtcacagggtttggaagacagatgatcgagcaaaccaaacaactggtggag
tccaagtacaccatttccaatggttaccaaggtgatgccaaggtcatttatggggacaca
gactccgtcatggttaagctcggagttgccacagtgagggaggccatggatatcgggaag
gaggcagcagagtggatatcgtcccatttcacaccgcccatcaaactggagtttgagaag
gtgtactacccatacctgctgatcaacaagaagcgctacgcaggcctctatttctccagc
tgcgcagacacgcatgagaagatggactgtaaaggcattgagacagtccgcagagacaac
tgtcctctggtggctaaccttatcaacacctgtctgcagaaatgcctcatagacagggat
ccccagggtgctgtagctcatgctaaagaagtgatctcggacctactgtgcaaccgcatc
gacatcagccagctggtcatcaccaaggagctgacgcgcaccgctcaggagtacgctggc
agacaggcgcacgtcgagctcgctgagaggatgaggaaaagagatgccggcagcgctccg
aacctgggagacagagttccatacgtcatcatcaaggctgcaaagggagtggcagcatac
atgaagtcagaggatccgatctttgtgctggagaacagcattcccatcgacacacaatac
tacctggagcagcagctgtccaagcccctgctgagaatatttgagcccatcctgggagag
agcaaggcagagaacgtcctgctcaagggcgaccacacgcgctgtaagactgttttgacc
tcgaagatcgggggtctcatggcatttgctcagaagagaagcacctgcatcggctgcaaa
gctgtgctcaaaacggatgcggctgtgtgcgctttctgtaagaagaaggagtctgaactg
taccaaaaagagatctttcatctgaacacgctggaggagcgtttttctcgcctgtggact
cagtgtcagcgttgtcagggctccctccatgaggatgtgctctgtaccagtcgggattgt
cccatcttttacatgaggaagaaggttcagaaagatttggatgaccagagcaatctggtg
aatcgctttggatggtga

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