Cottoperca gobio: 115012732
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Entry
115012732 CDS
T07513
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cgob
Cottoperca gobio
Pathway
cgob00260
Glycine, serine and threonine metabolism
cgob00630
Glyoxylate and dicarboxylate metabolism
cgob00670
One carbon pool by folate
cgob01100
Metabolic pathways
cgob01200
Carbon metabolism
cgob01230
Biosynthesis of amino acids
cgob01240
Biosynthesis of cofactors
cgob04981
Folate transport and metabolism
Module
cgob_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
115012732 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
115012732 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
115012732 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
115012732 (shmt1)
Enzymes [BR:
cgob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
115012732 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
115012732
NCBI-ProteinID:
XP_029294374
Ensembl:
ENSCGOG00000004877
UniProt:
A0A6J2Q964
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Position
8:complement(15982685..15988301)
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AA seq
482 aa
AA seq
DB search
MSLTNGHNVSKETWDSHNKMMLDPLSVSDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALETYGLDSDKWGVNVQPYSGS
PANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPRLIIAGTSCYSRNLEYCRLKKIANENGAYLLGDMAHISGLVAAGVV
PSPFDYCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKVYQTQVLANCKSLSSALIDHGYKIVTGGSDNHLILLD
LRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRNLMQEDFKKVA
EFIHRGIELTLEVQSSLDPKATLKEFIQALTHGEKFQQRVSEIKAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacaaatggccacaatgtgagcaaagaaacttgggattcgcacaacaagatg
atgctggatcctctgtccgtcagcgactctgaggttttctccatcataaaaaaagagaag
cacaggcagacgtatggcctggagctcatagcgtccgagaactttgccagcagagcggtt
ctagaggctctgggttcctgcatgaacaacaaatactctgagggatatcccggtcagagg
tactatggtggcacggagcatgttgatgagctggagagactctgtcagaagagggcgctg
gagacttatggtctggactcagacaaatggggtgtcaacgtgcagccatactcaggttca
ccggctaattttgccgtctacacggccgttgtggagcctcatggcaggatcatggggctg
gaccttcctgatggaggtcacctgacacacggcttcatgactgagaagaagaaaatctct
gcaacgtccatcttctttgagtccatgccgtataaggtgaatccagaaacgggctacatt
gactatgaccgactgcaagaaaacgctcggctgttccaccccagactcatcattgcagga
acaagctgctattcccgcaacctcgagtactgccgtctgaagaagatcgctaatgagaac
ggtgcatatctgttgggagacatggctcacatcagtgggttggtggctgccggagtggtg
ccctcaccctttgactactgtgacattgtttcgacgacaacacacaagacgctgcgtggc
tgccgtgctggactcatcttctacaggaaaggcgtgcggagtgtggatgctaagggcaag
gagactctgtacaacttggagtctttgatcaatcaggctgtgtttcccgggctgcaggga
ggaccgcacaaccacgctattgcaggtgttgctgtcgctctcaaacaagccatgacgcca
gagttcaaagtctaccagacgcaggttcttgctaactgcaaatctctctccagcgccctc
attgaccacggctacaagattgtcactggtggctctgacaaccatctgatcctgctggac
ctgcgcagcaaaggaactgatggaggacgagctgagaaggttttggaagcctgtgccatt
gcttgtaataagaacacctgtccaggggataaaagtgctctgcgcccgagtggtttgagg
tttggctctccagctctgacctccagaaacttgatgcaggaggacttcaagaaggtggcc
gagttcattcacagaggcattgagctgactttggaggtgcagagtagcctggatcccaag
gccactctgaaggagttcattcaggcgctgacccatggagagaagttccagcagcgggta
tctgaaatcaaagcagaggtggaggctttcgctggtcagttccccatgcctggcctgcct
gagctgtag
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