Cottoperca gobio: 115012763
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Entry
115012763 CDS
T07513
Symbol
tnrc6a
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115012763 (tnrc6a)
03036 Chromosome and associated proteins [BR:
cgob03036
]
115012763 (tnrc6a)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115012763 (tnrc6a)
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115012763 (tnrc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115012763
NCBI-ProteinID:
XP_029294410
Ensembl:
ENSCGOG00000020042
UniProt:
A0A6J2QAH0
LinkDB
All DBs
Position
8:14845838..14882822
Genome browser
AA seq
1909 aa
AA seq
DB search
MVAAVPRLRPGTDHSQNSWAAEGLEHPGLDTQYEPSPWSSGSPCSSDGNSNWGKVLVDGS
TDKPNNPSSTNSSVWPPSSSSFSCSSSSSSSGCGSGSDPELASECMDADSSSSIGSEKNL
AAVTTVMMSANASSSVSSTASSPSMVTSAMMVGVSVNGDSNGNSRQIIGGGVGTIGGANN
GNNNITGSSHYSAAGSSSIGSNNMGNHNKPVNNSGVWGSNMITGGSTPCINGGLNPNANH
GAWSQNPSPVSQGQRPPQAQGMSSKLGIAPQQGPTLGWGGVAAPNSSMMEDTEVNNGTAS
SKVLGSSNSGNGGLQPTNLNTDSNGPNNTIMMNTTTTTTNATTTSSPPNSTASPQLSGDC
SWGSIGGGNVGPLANGKPSSAPQHTQGELGGPGAFGTPWGATTYPGDKGPLNADTVNPQN
PALMQAGNPQISSTAAYKSNNTHNNTGAPHWDQGPANNPNQPQSNLSWGTGSNQIPGSAG
QTPGNGNQTTMGPPAGIPRPWGSSASSSSSSSSSSTTSNNKMTNGEWGSTTPGNNQSDAG
SHKGSSANNGWKSLEDDAMGMGGGGEGGGGGGGGGGGGGGGSNGVASVTGGWGRSGGSEG
SGESSGGRSSADRDGSQSKGGNRRKVIHPPTVISAVPQVDVDPRVLSNTGWGQTPVRQNT
SWDVNSAANNRHQSPRGDERKHSSGGSGWGTTPAAPSQTSGGWGGGPGSSGAGGSGWSER
QNPANGGGGQSSWNDGPSYKGGNNNGNTWSNNINKDDRSNTWTNAPKPQQGWGTNSGNGR
EGWGNGGNGARAGGNNHWGEPQKAASSVGWDSDSDRSGSGCWSEQSRTNTSSSNTWVGSG
GSNTPDQSTPNPGSNWGDSVHKPNPQSNSQGWSEPMKNNHGAQNWSEPNPKPSNEWGKAP
ESNMSRGNQAPNKSGWQGGPIPTAGQKEEVSTGWEEPSPESVRRRMEIDDGTAAWGEPSK
RGGGSLNKWSRTGQSEQEPAGQSTQHQSHPARSSMHPPQPVHPPQPVQPLAQDKSCTSWG
EPYAKKKESSTWEPPAPPPVKVDNGTSAWGKPMDTSSSWEEPGRDKREPAGPGWAGQHKS
APGPKPMETWGGEEASMGNSWDQEEEVEIGMWSNSQQDNRSHDQNTWNYKHKVSNKMNKP
VNKPDEPWMKPFINQFNSMNFSRDSPDDSMKTGAGMVQDKRMDMGSIGDYNGVMGKNPGS
RHQLHKESAMDRSPYYDKLSVSPSAYNNPASDEHSSNQSMSFPPSNSAQPITCLDSGPSP
AHSSPGGARQNVNPMMGGSSVAQGRGGPQSQAPPQPNLRNQVPPPILPSQVPPSLLKYPG
GNGGLNPLFGPQQVAVLNQLSQLNQLSQLNQINQLQRLLLQQQQQQQQQQQQQQQQQQQQ
QQQQKAQSHRSMPMGRPTEQTRPIGSSPSMMQPPRHLDPSLLKQAPSHKPYLDNYLSHNA
PEMQKDAAALGSFSNFPLNLNSNLNVPLDMSVGGSSGGGAVSYKEPPQSRMKKLWATDPL
EQNSKPGAMSSGLRLEDSPFYDFLSPGPSPLSPPGQSMGSVGDGWPPRANSPPPHGNTVT
WPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSINTVRDTDHLRDRNNGPSSSLNTTM
PSNSAWSSIRASSHSGSLTSTAQSTSARPSESKWSPGGGSVSNSSLAHELWKVPLPTKAL
SVAAPSRPPPGLTSQKPSSASSGWDGSALRLGGWGSSESRYTPGSSWSDSSSSGRTQWLV
LKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNAVVCYSSKDEAAKAQKSLHMCVLGNT
TILAEFASEEEINRFFAQGQSLATPSSGWQAIGSSQTRMDQSHPFPSRAPEPTQWNSSDL
HSSSLWGGPNYSSSLWGSPSGTEAGRISSPSPISSFLPVDHLTGGGDSM
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagctgtgcccaggctcaggcctggcactgatcacagccagaacagttgggca
gctgaaggtctggagcatcctggcttagacacgcagtatgagccttccccctggtcctca
ggctctccctgcagcagtgacggtaacagcaactggggcaaagtcctagtagacggaagc
accgacaaacccaacaacccttcttcaactaactcttccgtctggcctccctcctcttcc
tcattctcttgctcctcatcttcttcctcttctggctgcgggtcaggatcagaccctgag
ttggcatcagaatgcatggacgcagactctagctcctcgatcggctcagagaaaaacctt
gccgctgtgacaacagtaatgatgtcagcaaatgcttcttcctctgtgtcttctacggct
tcttctccctctatggtgacttccgccatgatggttggcgtttcagtgaatggagacagc
aacggcaacagtcgtcagataattggtggaggggtgggaaccatcggtggtgcaaataat
ggaaataataacatcactgggtcctctcactactccgcggctgggtccagcagtattggc
agcaataacatgggtaaccacaacaagcccgtcaataacagtggtgtctggggcagcaac
atgatcacaggcggaagcaccccctgcatcaatggagggttaaacccaaatgccaaccac
ggtgcctggtcacaaaatccaagcccagtgtcccagggccaacggcctccacaggctcag
gggatgagttccaaactgggtatagctccccaacagggcccaacgctaggctggggtggc
gtggcagctccaaacagcagtatgatggaagacactgaggtgaataatggtacagcaagc
agcaaggtgttaggaagcagcaacagtggaaatggtggcctacagcctaccaaccttaac
actgattctaatggaccaaataacactattatgatgaatactactactactactactaac
gccacaacgacctctagtccaccaaactctacagcctcaccccaactcagcggggattgt
tcctggggttctattggaggagggaatgtgggtccgctggcaaatggaaaaccctcatca
gccccccagcacacccaaggagagctagggggtcctggggcctttggtacgccttggggc
gcaactacctaccctggagacaagggccccctaaatgcagacactgtgaacccacaaaac
cctgccttaatgcaggctgggaacccccaaatatcctctaccgctgcttacaagagtaat
aatacccacaataacactggggccccacactgggaccaggggcctgccaataacccaaac
cagcctcagagcaacttgtcctggggtaccggctcaaatcaaatcccaggctctgcaggc
caaacaccaggaaatgggaaccaaactactatgggtcccccagcagggatacctcgcccc
tgggggagcagcgcatcgtcttcttcatcgtcctcatcgtcctctaccacatctaacaac
aagatgacaaatggagaatggggatcaacaactcctggtaataaccaatcagatgctgga
agtcataaaggaagctcagccaacaatggctggaaaagcctggaggatgacgccatgggc
atgggagggggaggtgaaggtggaggaggaggaggaggaggaggaggtggtggtggtggt
ggaagcaatggcgtggcgagtgtcactggaggctggggtcgatctggaggaagtgaagga
agcggagagagctctggaggccgatccagcgccgacagagacggcagccagtcaaaaggg
ggaaatcgcagaaaggttatccatcctccaacagtaatatcagctgtgccccaggtcgat
gtggacccaagggtcctgtccaacactggatggggacagacacctgtacggcagaacacc
tcctgggacgtcaattctgctgctaacaataggcaccaaagtcccagaggagacgaaaga
aagcatagcagtggaggctccggatggggcacaacaccagcagctccctcccagacctct
ggaggttggggtggtgggccgggcagctcaggtgcaggaggttctggctggagtgaacgg
caaaacccagcaaatggaggaggtgggcagagtagctggaacgatgggcccagctacaag
gggggcaacaacaacggtaacacctggagcaataacattaacaaagacgacaggtccaat
acatggactaatgcgcccaaaccgcagcagggctggggtaccaatagtggaaatggaagg
gaaggctggggtaatggtggaaatggtgccagagcagggggcaacaaccactggggggag
ccccaaaaagctgccagctcagtgggctgggacagcgacagcgaccggtcaggctctgga
tgttggagcgagcaaagccgaaccaataccagcagcagcaacacctgggtagggagcgga
ggatcaaatactccagaccagagcactccgaatccaggctccaactggggcgactcagtc
cacaaacccaatcctcagagtaacagccagggctggagtgagcccatgaagaacaaccac
ggagcccagaactggagtgagccaaatcccaagccctccaatgagtggggaaaagctcct
gaatccaacatgtccagaggcaatcaagcccctaacaagtcaggctggcagggaggcccc
atacccacagcaggtcagaaggaagaagtgtcaactgggtgggaagagccttctccagag
tccgttcgtcgaagaatggagatcgatgatgggacagcagcttggggagaacctagtaaa
cgcggcggtggatctctcaacaagtggagcaggactggccaatcggagcaggagcctgct
ggccagtccactcaacaccagtctcacccagcacgcagctcgatgcatcctcctcagccc
gtgcatcctcctcagcccgtgcaacctcttgcccaggacaaaagctgtactagttggggg
gagccgtatgccaaaaagaaggagtcctcaacgtgggaacctcccgctcctccgcctgtg
aaagtagacaacgggacgtctgcctgggggaagcccatggacaccagctccagctgggaa
gaacccggcagagataagagagagcctgctggacctggatgggccggccagcataagtct
gctccaggtcccaagcccatggagacatggggtggtgaggaggcgtccatgggcaatagc
tgggaccaggaagaggaggtagagattggcatgtggagcaacagccaacaggacaacagg
tcccacgaccaaaacacctggaactacaagcataaagtctctaacaagatgaacaaacca
gtcaacaaaccggatgaaccctggatgaaacccttcatcaaccagttcaacagcatgaac
ttctctagagactctcctgacgactccatgaagacaggagcagggatggtgcaggacaag
cgtatggacatgggcagtattggagactacaatggagtaatggggaagaaccctggatct
cgacaccagctccacaaggagtctgccatggatcgcagcccttactatgacaagctatcc
gtttccccctctgcttacaataacccagcttctgatgagcactcctccaatcaaagcatg
agctttcccccttccaattctgctcagcctatcacctgtctcgactctgggccgtctcct
gcccactctagtcctgggggcgctcggcagaatgtaaaccctatgatgggtggcagcagc
gtagcacagggccgaggtggcccccagtcccaggcccccccccaacccaaccttcgtaac
caagtgcctccacccatcctgccctctcaggtgcctccatccctgttgaagtacccagga
ggtaacggaggtctgaaccctctgtttggccctcagcaggtggctgtgctcaaccaactc
tcccagctcaaccagctgtcacaactcaaccagatcaaccagttacagcgtcttctcctc
cagcaacagcagcaacagcaacaacagcagcagcagcagcaacaacagcagcagcagcag
cagcaacagcagaaagctcagagccatagatccatgcctatgggacgaccgactgaacag
acacgtcctattggttcgtctccatcaatgatgcagccgccacggcacctggacccctcc
ctgctgaaacaggctccatcccacaaaccgtacctggataactacttgtcccacaatgcc
cctgagatgcagaaggatgctgctgctctcggatccttcagcaacttccctttaaacttg
aactctaacctgaatgtacccctggacatgagtgttggtggtagtagtggcggcggagct
gtgagctacaaagagcctccccagtccagaatgaagaaactttgggctactgaccctctg
gagcagaacagcaaacctggtgctatgtcgtctgggctgcgtctggaggattctcccttt
tatgacttcctgtctcctggcccatctcccctgagtcctcccggccaatcaatgggctcg
gtgggcgatggctggccgccccgtgccaactcccccccgccccatggaaacactgtcacc
tggcccccagagttccggcccggggagccttggaaaggataccccaacattgaccctgag
actgatccttatgtgacccccggcagtgtcatcaacaacctctccatcaacaccgtccgc
gacacagaccacctcagggacaggaacaatgggccatcctcatcactgaacaccacgatg
ccttctaacagtgcctggtcatccattcgtgcctccagccacagcggttccctcaccagt
acagcacaaagcacttcagccagacccagtgagtcaaagtggtctcccggcggcggttct
gtgtccaactcctccctggcccatgagctgtggaaggtccccctgcctaccaaggcgctg
tctgtggcggccccctccagaccaccacccggcctcaccagccagaagcccagctctgcc
tcctccggctgggacggctctgccctgaggctgggggggtggggctcctctgagtccaga
tacacacctggttccagttggagcgacagcagcagctcagggagaacccaatggcttgtt
ctgaaaaatctcacacctcagatcgacggctctaccctgaggaccttgtgcatgcagcac
ggccctctgatcacattccacctcaacctgccgcacggtaacgccgtggtatgctacagc
tccaaggatgaggccgcaaaggcccagaagagcctgcacatgtgtgttttggggaacact
actattctggctgagtttgccagcgaggaggaaatcaaccgtttctttgcacaagggcag
tcactggccactccctcctctggctggcaagccatcggctcctctcagaccagaatggat
cagtctcacccatttcccagccgcgctcctgaacctacccagtggaacagcagcgatctc
cacagctcctccctctggggcgggcccaactattccagtagcctgtgggggagtcccagt
ggcaccgaggcagggaggatcagcagcccttctccaatcagctccttcctcccggtggat
cacctgacagggggtggggactccatgtga
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integrated database retrieval system
