Cottoperca gobio: 115012831
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Entry
115012831 CDS
T07513
Name
(RefSeq) MHC class II regulatory factor RFX1-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115012831
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Other basic domains
RF-X
115012831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
115012831
NCBI-ProteinID:
XP_029294510
Ensembl:
ENSCGOG00000008373
UniProt:
A0A6J2QB27
LinkDB
All DBs
Position
8:complement(11842910..11859303)
Genome browser
AA seq
917 aa
AA seq
DB search
MATSGYVGEIQPAAQPQGSVVTITPGHPDASSTPASGPQFLAEIQSAVATPTVVTSTGQT
TPTDQDTSINTPKPADGSQAQSTAQAQPPQTQYVTAEIQGSPTQSGNAQSTPQYIVVTVT
EGSLHSCDSVSDSSPPPAVVQTGVPTQVVQQVQTAQQRSVVQATSQIAKTEPGTQLSVTS
LQPVHISQEVQQQLTPVPVQHVYANQVQYVEGGEANYTTSTIRSSAFPYTDTPLYTQTTA
AQYYEGQPTSVSQASTPGTPLTVSVTAGTTGGVSMFVAQPTSAAGGGATVVTTGGTTNGA
GEGAGTNGGAAGSYVIQGGYMLGSSSGGAAGNSQSYSHTARASPATVSITEGEESSVPSA
DKKLFSFFSLPACQVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLI
RSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVH
KVEGMTNGTAAGAGQQQQQQQGSGQVDISTQVQQYQQFLDASRALPEFPDIDLQGKSLPE
GIELEHIKSFQLLYREHCEAILDVMVNLQFTLVETLWKTFWRFSQSQAGDATLAVHDESE
KRLPKSCLVLLCKYDPVLRWSRDCDNSLYQALVEILIPDVLRPIPSALTQAIRNFAKSLE
SWLTNAMMNIPEEMVRIKVTSANAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLN
RVDFANVQEQASWVCRCEDRVVQRLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQQS
PAFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKG
ETPIAVMGEFASLGRGLNQLDPDKEEEEEEEDESDDESQELSLPSDGVVLGDESLEPPAK
LARMDQRVLFTTGSVDD
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggctacgtaggtgagatccagccagcagcccaaccccaggggtctgtt
gttaccatcacaccggggcatcctgacgccagttctacccctgcatctggccctcagttt
ctggctgagattcagtctgctgtggccacaccaactgttgtcacatccacaggccaaact
actcccactgaccaagacacctccatcaacactccgaagcctgcagatggtagtcaagcc
cagtccaccgcacaggcccagcctcctcagacacagtatgtgactgcagagatccagggc
tcccccacacagtctggaaatgctcaaagcactcctcagtacatcgttgttacagtcaca
gagggctcccttcactcatgtgacagtgtgtcggactctagcccccctccagctgtggtg
caaacaggagttcccacacaggttgttcagcaggttcagacggctcaacagaggtccgtg
gtgcaggccacttctcagatagccaagactgagccaggtacacagctcagtgtcaccagt
ctacagcctgttcacatcagccaggaggtccagcagcagctcacaccagtgccagtgcaa
catgtgtacgccaatcaagtgcagtatgttgaaggaggagaggccaactacaccaccagc
accatccggtcgagtgcctttccttatactgacacaccactgtacacccagaccacagct
gcccagtattatgaaggtcagccaacttccgtctcacaggcctccacccctggcacacct
ctaaccgtctctgtgactgctggcacaacagggggtgtgtccatgtttgttgcccagccc
accagtgcagcaggtggaggggccacggtggtgaccacaggtggcaccaccaatggggca
ggggaaggggcaggcaccaacgggggcgcagcaggcagctatgtgatccaggggggttac
atgctgggcagcagcagcggaggggcagctggcaacagtcagagctactcacacaccgcc
cgcgcctctccagccactgtgagtattacagaaggcgaggagagtagcgtgccgtcggca
gacaagaagctattttcttttttttctttgcctgcgtgtcaggtacagtggttgctggac
aactatgagacagctgaaggagtgagtctgccacgttccaccctctactgtcactatctg
ctgcactgccaggagcagaaactagagcctgttaatgctgcctccttcgggaaactcatt
agatctgtgttcatggggctccgcacccgacgcctgggcacacggggtaattccaaatac
cactactatgggctgaggatcaaggcaggctcttctcttctccgtctgatggaagaccag
cagcatctggccatgaggcagcagcccttctcacagaaacagaggttgaagcctgtgcat
aaagtagagggaatgaccaatggcaccgcagcaggagcaggccagcagcagcaacagcag
cagggatcagggcaggtggacatcagcacccaggttcagcagtaccagcagttcctagat
gcatctcgagctctcccagagttcccagacatcgacctccaggggaagtctctgccagag
ggaattgagctggagcacataaagagctttcagctgctgtacagagagcactgtgaggct
atactagatgtgatggtcaacctgcagtttaccctggtggaaactctgtggaagaccttc
tggaggttcagccagagtcaggctggagatgccacgttggctgttcatgacgagtcagag
aagcgcctccctaagtcctgcctggtgctgctgtgcaagtatgatccggtgctgcgctgg
agccgggactgtgacaacagcctgtaccaggccctggtggagatcctcatccctgatgtc
ctcaggcccatccccagtgccttaactcaagccatccgcaactttgccaagagcctggag
agctggctgaccaatgccatgatgaacatcccggaggaaatggtccgcatcaaggtaaca
tcagccaatgcatttgcccagacactgcgtcgctacaccagtctgaaccacctcgcccag
gcagcccgcgctgtgctccagaatacagcccagatcaaccagatgctctctgacctcaac
cgcgtcgacttcgctaacgtccaggagcaggcttcatgggtgtgccggtgtgaagaccga
gttgttcagcggctggagcaggacttcaagctgaccctccagcagcagaactctctggag
cagtgggctgcgtggctggatggtgtagtctcccaggtcctaaagccctaccagcagagc
cctgccttcccaaaggccgccaagctcttcctactcaagtggtccttttacagttccatg
gtgatcagggacctgaccctgaggagtgcagccagttttggttcctttcacctgatccgc
ctgctgtatgatgagtacatgtactacctgatagagcacagagtggcccaggctaaagga
gagacccccattgctgtcatgggagagtttgccagtttaggccgtgggctaaatcagctg
gatcccgacaaagaagaggaagaggaagaggaggacgagagtgatgatgaaagtcaggag
ctgtcccttccctcggacggggtcgtgctaggagacgagtcactggagccgcctgccaag
ctggccagaatggaccagagagtcctcttcacaaccggatcagttgacgactaa
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