Cottoperca gobio: 115013370
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Entry
115013370 CDS
T07513
Name
(RefSeq) whirlin-like isoform X1
KO
K21879
whirlin
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgob03037
]
115013370
Cilium and associated proteins [BR:
cgob03037
]
Primary cilia and associated proteins
USH complex and associated proteins
115013370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
Motif
Other DBs
NCBI-GeneID:
115013370
NCBI-ProteinID:
XP_029295467
Ensembl:
ENSCGOG00000004113
UniProt:
A0A6J2QDY6
LinkDB
All DBs
Position
9:29423069..29533670
Genome browser
AA seq
991 aa
AA seq
DB search
MSADLERVSLITSVNSAGSGGRALSANVRRLHNALNLLLNAPEREQFIHCLNVYHAKRNV
FDLVQTLKVILNTTGKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKTELLPSNSNAEGFG
EQGDSTLQKYISSIHEQPLISGYPDGFSAAAELSASMASPFFEGPFGEVRKVLLTRSRSH
EGLGFSIRGGSEHGVGIYVSLVEPGSLAEREGLRIGDQIVTVNDIMFDNVTHIEAVKMLK
ECKKLAISVCSMGRIPGGYITNHVYSWVDPGGRSVSPPPDSQEANQRQGQGMEERTVNLN
MDDGRSLGLMIRGGAEYGLGIYITGVDPGSAADAGALKVGDQILEVNGQSFVTISHDEAV
HILKTGHQLLMKVRDVGRLPHARTVVDETKWICSQAIAETNATANPSSVTNPTVNAGILI
SVSASACSSRPSSAKATPVLGKPAVYRGVGPPGVQVSLEQQAYMLLTEPERQTMVYYLQE
YQDGHIGVEPLTMALFELFNTHAKLSMLSEVRSLVAPQDLEFYDRLVLHREREAHQAWHG
GLRVLHPQGHCNYSAPMIHDAGHALPDTTDCSVGGWTEKDQKENTNALQNIALAQMQASG
ESPSLFRATPLQAPSRLSREKELSRKPSARRVQLGSSPLFTGPTRLLQDCLHKSLKSLPT
THQSSPPSAHHTCAGASHHTSLNTLHHTCQSSLQLSDSEHHNHPHFAHPFHHHAAQNSRQ
SSGHHTCPGFLHHRESSSSAKPEASVKLAFRSSSCEKSSFLSKSASSSKAASPMQSPHPS
PHPSPCPSPCPSLFTPAAPLCSPDRPCSPALMQKVIITDMNRLSADSRTQQRGATLSQLS
DSGQTLSEDSGVDIAEAGGLSKDGSPRPSKNQQGHLEKPGAYAPSPGTRHTGSPVPLPTA
TLVRVVKNSNTLGIAIEGGANTRQPLPRIVTIQKGGSAHNCGQLKVGQVILEVNGISLRG
REHKDAAQIIAEAFKTKEKDHIDFLVVEPGF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatctggagcgcgtttcgctcatcacatcggtgaactctgccggctcgggc
ggccgtgcgctttcggcaaacgtccggaggcttcacaacgctctcaacctgctgctcaac
gccccggagagagagcagttcatccactgtctcaatgtgtaccacgccaagcgcaacgtc
ttcgacctggtccagactctcaaagtgattctcaacacgaccggcaaacgacagctgctg
cccatgctgcgcctggtcatcccgaggtccgatcagctgctgttcgaccagtacacgtcc
gagggactctacctgaagacagagctgctccccagcaacagcaacgcggagggttttggg
gagcagggcgactcaactttgcagaaatatatcagttccatccatgagcagcccctcatc
tcaggctatccagacggcttcagcgccgccgcagaactgtcggcttccatggcctcgccg
ttcttcgagggtccctttggagaagtgcgcaaagtcctcctgactcgctccaggagccac
gagggtctgggcttcagcatccgcgggggttcggagcacggcgtggggatctacgtgtcc
ctcgtggagccgggttcattggccgagagagaaggactgaggatcggggaccagatagtg
accgtgaacgacataatgtttgacaatgtcactcacatagaggcagtgaagatgctgaag
gaatgcaagaagctggccatttcagtgtgttccatgggtcggatccctggaggctacata
actaaccacgtgtatagctgggtggaccctgggggccggagcgtctccccgccacctgac
agccaggaggccaaccagaggcaaggacagggcatggaggagaggacggttaacctgaat
atggacgatggtcgctctctgggcctaatgatcagaggtggtgctgagtatggactgggg
atctacatcacaggagtggaccccggatctgctgcagatgctggtgcactaaaggtgggt
gaccagatcctggaagtgaacggtcagagctttgtcaccatctcccacgatgaggcagtt
cacattctcaaaacaggacaccaactgctgatgaaggtgagggatgtgggtcgtctgcct
catgcacgcacagtggtggatgagaccaaatggatctgcagtcaggccatagctgagacc
aatgctacagctaacccaagttctgtcaccaaccccactgtcaatgctggcatcctcatt
agtgtcagtgccagtgcctgcagttcaaggccatcctcagccaaagctacacctgtatta
ggaaagccagcagtatacagaggtgtaggcccaccaggtgttcaggtttctctggagcag
caagcctacatgctgctgacggagccagagaggcagactatggtctactacctgcaggaa
taccaggatggacacataggagtggagccactgaccatggctctgtttgagctctttaac
acacatgcaaagttgtctatgttgtctgaggtgagaagtctggtggctccccaggatctg
gagttctacgacaggctggttttgcatcgtgagagggaggcccaccaggcctggcatgga
ggacttagagttctgcatccacagggccactgcaactactcggcccctatgatccatgac
gcaggacacgcccttcctgatacgaccgactgctctgttggtggctggacagaaaaagac
cagaaagagaacactaatgccttacagaacattgcactggctcaaatgcaggcttcaggt
gaatctccttcattattcagggctactcctctccaggctccgagtaggctgtcaagggag
aaggagctcagccggaagccttcagcccggagggtgcagctcggctccagcccgctgttt
actggcccaacccggctgctccaggactgcctacacaagtcgctcaaatccctccccacc
actcaccagtcttcaccaccctctgcccaccacacttgtgctggtgccagccaccacact
tccctcaatacactccatcacacctgccagagttcccttcaactctctgactctgaacat
cacaaccacccccactttgctcatcccttccaccaccatgctgcccaaaacagccggcaa
agctcaggtcaccacacctgtccaggcttcctgcaccaccgggaatcctccagctctgct
aaaccagaggcatctgtcaagctagctttcagatccagctcctgtgagaagtcctccttt
ttgtcaaagtctgcctcctcttccaaagcggcatctcccatgcaatcccctcatccatca
ccccatccgtcgccatgcccctccccctgcccctctctctttacacctgctgctccactc
tgtagtcctgataggccctgctcgcctgccctcatgcagaaagtcatcataacagacatg
aaccggctttcagcagactccagaacacagcaaagaggggccaccctgtcccagctgtca
gacagtggccagactctgagtgaggacagtggggtggatatagccgaggcaggaggcctc
agtaaggatggcagccctcgacccagcaagaaccagcagggtcatctggaaaagccaggg
gcctatgcaccttctccaggcaccagacatactggctcacctgtcccattgcccactgct
accttggtacgagtggtgaaaaattccaacacccttggcatcgctatcgaggggggagcc
aacacacggcaacctttgccgcgaatagtcaccattcagaaaggaggctcagctcataac
tgcggtcagctgaaggtgggtcaggtcatcctggaggtcaatggcatttccctgagaggt
cgggagcacaaggatgctgcccagatcatagccgaggccttcaagaccaaagagaaggac
cacattgactttctggttgttgagccaggattctag
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