Cottoperca gobio: 115013498
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Entry
115013498 CDS
T07513
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115013498 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
115013498 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115013498 (thoc5)
03041 Spliceosome [BR:
cgob03041
]
115013498 (thoc5)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115013498 (thoc5)
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115013498 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
115013498
NCBI-ProteinID:
XP_029295703
Ensembl:
ENSCGOG00000013784
UniProt:
A0A6J2QB91
LinkDB
All DBs
Position
9
Genome browser
AA seq
684 aa
AA seq
DB search
MSSDALKKRKPKVLRSEGGTPEMKRGRGDVEQQDVRVYNEEVELDSRDPEQDFLQYKESC
ESLATLMSEIQELKADGDKEGSAEVEQRRMQGCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEGEFYQEAPQDISRPHLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQSTKEKIQKSIEVKKEHLTSLQPGLNAIMQA
SIPVQEYLSMPFEQAQIQTEVARHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLFFYYLMNLNIMTVKTKVSTATDLNSAISAGDLLKSDTVLSCLYSSDQGRETPNPAN
RYQFDKVGIVSFADYVEELGHAYMWVQSLGGLHFPKDPSEGVSVGSSLSASHMESTMKLL
RGRLQSRLALHKQFASLEHSIIPVSSECQHLFPAKIISSLARWTTTTHQEYTELPYTRHV
TDAGLAKETDLYFMAVVERGTARLQAALVLNPRYPEVSPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKKELQGPRPGHQLLTNQFSRLCVCLDVYLETEGQDDSVEGPLEFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggacgccttgaagaagcgaaagccgaaggttctccgtagtgaaggaggaacc
ccagagatgaagcgaggtcgaggagatgtggaacagcaggatgtgcgtgtgtataatgag
gaggtggaactggacagcagggaccctgagcaggacttcctgcagtacaaagagtcatgt
gagagtttggccacactcatgagcgagatccaggaactgaaagccgatggagacaaggaa
gggagtgctgaggtcgagcagagacgcatgcagggctgcatccacttcatgaatctgaag
aaactcaatcgtctggctcatatgcgactaaagagaggcagagaccagacacacgaggca
aagcagaaagtggatgtgctgcaccttcagttacagaacctgctgtatgaagttatgcat
cttcagaaggagatcagcaaatgtctggagttcaagtccaagcatgaggagatagacttg
gtgtctgagggagagttttaccaggaagcgccacaggacatttccaggcctcacctcacc
aaaaatgatccccaccaactcacactggcacgactggactgggagctcgaacagaggaag
aggttggcagagaaatacaaggagtcacagtccacaaaggagaagatccagaagagcatc
gaggtgaagaaggaacatctgacaagcttgcagccaggactcaatgccatcatgcaggcc
tccatccccgtgcaggagtacctgtccatgccctttgaacaggctcagatacagacagag
gttgcccgccacctgcctccacctctctacgtcctgtttgttcaagccaatgcctatggc
caggcctgtgacaagaacctgagtgtctcaatcagtggtgatgtggatgaggccaaggcc
ctgtccaaacctccagaagattcccaggatgatgagagtgactcagatgcagaggaggag
caagagaaaacaaagagaagaaggccaacgacaggtggccagctggatgacaaaagacgg
gagatgctgaaaaggcaccctctgtccctctgcttggacctcaagtgcaaagatggcagc
atcctccatctcttcttctactacctgatgaatctgaacattatgacagtcaagaccaag
gtctccaccgccacagacctcaactccgccatcagcgcaggggacttgctgaagtcagac
actgtactcagctgtctctactccagcgaccagggacgagaaacgcccaatccagctaat
cgctaccagttcgataaagtcgggatcgtttcctttgctgattatgtggaggagctgggc
catgcctacatgtgggtgcagagtctaggaggactacattttcccaaagatccttcagag
ggtgtgagtgtgggcagttccctgagcgccagccacatggagagcaccatgaagctgctg
aggggacgactccagtcccgtttggctttgcacaaacagtttgcctctttagaacacagc
atcatcccggtgtccagtgagtgtcagcacctgtttcctgccaagatcatctccagttta
gctcgctggaccaccaccactcaccaggagtacacggagctgccatatactcgtcatgtg
actgatgctgggctggcgaaggagactgatctgtactttatggctgtggtggaaaggggc
acagctcgtctccaggccgccttggtgctgaatccccgttacccagaagtctctcctctg
ttctccctctccctcagctggaagggagagcgcagtgggcgcactgacgacaaccttaga
gccatggagagcgaggtcaatgtgttcaaaaaagaactacaggggcctcgtccaggacac
cagcttctgaccaatcagttttcacgcctatgcgtctgcctggacgtgtatttggagact
gaaggtcaagatgacagtgtggagggaccacttgagtttcccagagaaaagatgtgcctg
cgcaccgtcaggggtccaaatcgtctgaagccattcaagtacaaccaccctcagggcttc
ttcagtcaccgctag
DBGET
integrated database retrieval system
