KEGG   Cottoperca gobio: 115013524
Entry
115013524         CDS       T07513                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
cgob  Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgob03019]
    115013524
   04121 Ubiquitin system [BR:cgob04121]
    115013524
Enzymes [BR:cgob01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115013524
Messenger RNA biogenesis [BR:cgob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115013524
Ubiquitin system [BR:cgob04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    115013524
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_2 zf-RING_2 KH_DEAH11_2nd zf-C3HC4
Other DBs
NCBI-GeneID: 115013524
NCBI-ProteinID: XP_029295739
Ensembl: ENSCGOG00000013476
UniProt: A0A6J2QCM7
LinkDB
Position
9:complement(13475391..13484002)
AA seq 710 aa
MPSSTSLLEADEGESEVPPPLVHAFAGMGLEEHHGTQSQIHELVDESLSYHHHHHQLPPV
SHFNLLGTVLDLKPLPLHRPPSGDGLNIAAAPEDEEPEVVAAADSLLLAQAHRHQHLHSG
PGGSVMPPGMEPPHVETVLLYNGDERDDTGLVGSALPPAGSMALLPPGVYGESGYEAESS
LLARRKSVNTTECVAVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEQPVFVVTGR
KEDVAMAKREILSAAEHFSLIRASRNKTGPLSAATGPGTPSLPGQTTIQVRVPYRVVGLV
VGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRARDEIEAHIALRTGTCGGI
EAPGVDNNDFQYNGTDVSFENSAAAAGLGEAGWLHAGASSQSGGGGSGGGHGGGGGGGGA
GGGGGGGLLPMTINGTQPVNSNINSGVRMSSTYRNDSSSSLGSGSSSADSVYGTGNGNRM
ADLSPTCQFNTNANNNNNNNNNSNGGGANFWFGESLLPVGSEELVSLGGGGSSSGFDPLT
ISTAQAAHPAAQPQIWSPYVDHQPPQAFDARHSQTSQPGTPRLSPTFSGTEALEHPQAQR
VHRGPFASAGTLDAHRFPSYSSAFSSSSESTASSSSPPESSLSHRPGLVSAGRGQEICIH
CMDNQVIAALVPCGHNLFCLDCATHICQGPDAICPVCLSPVTQAIQLRNM
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgccgagtagcacgtctttgctggaggccgacgagggagagtccgaggtcccaccgccg
ctagtgcacgctttcgccggtatgggccttgaggagcaccacggcacccagagccagatc
cacgaactagtagatgagagcctctcctatcaccaccaccaccatcagctccccccggtt
tctcatttcaacctcctcggtacggtcctagacttaaagcccctgcctctgcatcggccg
ccctcgggagatggactgaacatagcggctgcgcccgaggatgaagagccagaagttgta
gccgccgccgactccttattgctagcgcaggcccaccgccaccaacaccttcactcgggg
ccgggtggctccgtgatgcctcccgggatggagccgcctcacgtcgagactgtcttgttg
tacaacggagacgagcgggacgataccgggctcgtcggcagcgccctaccgccggcaggc
agcatggcgctactaccgcccggcgtgtacggagagtcgggctacgaggccgagtcttcg
ctgttggctcggcgaaagagcgtcaacacgaccgaatgtgtggcggtgccgagctccgag
cacgtcgcggagattgtgggcaggcagggctgtaagattaaagctcttcgagccaagacc
aacacctacattaagacaccagtgaggggagagcagcccgtctttgttgtgacgggccgc
aaagaagatgtggccatggctaagagggagatcctgtctgcagccgagcacttctccctc
atcagagcctctcgaaacaagacgggccctttgtctgctgcaaccggtccagggactccc
tctctacctggacagacgaccattcaggtgcgggtaccataccgtgttgtagggctggtt
gtgggtcccaaaggggcaactatcaaacgtattcagcaacagacccatacctacattgtg
acgccgagtcgtgacaaagagccggtgttcgaggtcaccgggatgccggagaacgtggac
cgtgcaagggatgagatagaggcgcacatcgccctccgcacaggaacctgtggaggcatt
gaggctcctggtgtagacaacaatgactttcaatacaatgggacagacgtcagctttgag
aattctgcagcagcagctgggctgggggaggccggatggcttcatgcaggtgcttcatcc
cagagtggtggcggcggcagtggtggtggtcatggtggcggcggtggtggtggtggtgct
ggtggtggcggtggcggtggcctgctgcccatgaccatcaacggtactcagccagtcaat
agcaatattaacagcggtgtcaggatgtcctccacctaccgcaacgacagctccagttct
ctgggcagcggctccagttcagctgattctgtctacggcactggtaatggtaaccggatg
gcagatttaagtccgacctgtcagtttaatactaatgctaacaacaacaacaacaacaac
aacaacagtaatggtggcggtgcaaatttctggtttggcgagagtcttcttcctgtgggg
tctgaggagctggtcagcctgggaggtggaggctcttcctcaggattcgatccattaacc
atctccactgcccaagcagcgcaccctgctgcacagccacaaatatggagcccctatgtg
gaccaccaacccccccaggccttcgatgctcgtcattctcagaccagtcagcctggaacg
cctcggctctctccaaccttctccgggacagaagccttggagcaccctcaggctcagcga
gttcacagaggcccttttgcctcggctgggaccctcgatgcccacaggttcccctcttac
agctcggccttctcctcttccagtgaaagcaccgcctcctcttcctcccctcctgagtcc
tccctctcccatcgaccagggctcgtatcagcagggagaggtcaggagatatgcatccac
tgtatggataaccaggtgatcgctgccttggttccctgcggccataacctcttctgtcta
gattgtgccacccatatatgccagggtccagatgctatttgccctgtgtgcctgtctccc
gtcacacaggccattcagcttcgcaacatgtga

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