Cottoperca gobio: 115013674
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Entry
115013674 CDS
T07513
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03082
ATP-dependent chromatin remodeling
cgob03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115013674
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115013674
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115013674
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115013674
03036 Chromosome and associated proteins [BR:
cgob03036
]
115013674
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115013674
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115013674
SWI/SNF complex
115013674
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115013674
PBAF complex
115013674
SWI/SNF complex
115013674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
115013674
NCBI-ProteinID:
XP_029295987
Ensembl:
ENSCGOG00000008353
UniProt:
A0A6J2QFE6
LinkDB
All DBs
Position
9:complement(25139610..25148234)
Genome browser
AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKKI
VESSHDHGYTQLATSVTLLKAAEVEEILEGNDEKYKAISISTEPPAYLREQKGKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQSEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDG
ILEEQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttagcaaaacgtttggacaaaaaccagtaaaatttcagctcgaggaggatgga
gacttttacatgatcggatcggaggtggggaactacctccgtatgttcagaggctccctg
tataaaagatacccgtcattatggagaaaactggcatcagtagaagaacgaaagaaaata
gtggagtcctcacacgatcacggctacactcagctggccaccagtgtgactctgctgaag
gctgcggaggtcgaagagatcctggaaggaaacgatgagaagtacaaagctatctccatc
agtactgagccccccgcctacctcagggaacagaaggggaagaggaacagtcagtgggtt
cccaccctgcccaacagctctcaccacctggacgcagtgccctgctccaccaccatcaac
cgtagccgcctgggccgcgacaagaagagaaccttcccactgtgctttgacgaccacgat
ccagcagtgatccacgagaacgccactcaatctgaagttctggttccgatccgtctggac
atggagatcgagggacagaagctcagagacgctttcacctggaatatgaacgagaagctg
atgacgcctgagatgtttgctgagatcctctgcgacgacctggacctcaacccgctggcc
ttcgtcccggccatcgcctcggccatccgacagcagatagagtcttacccgacagacggc
atcctggaggagcagacggaccagagggtcatcatcaagttgaacatccatgtggggaac
atctccctggtggaccagtttgagtgggatatgtctgagagagagaactctccagagaag
ttcgccctgaagctttgctccgagctcggcctgggcggagagttcgtcaccaccatcgcc
tacagcatccgcggtcagctgagctggcaccagaggacgtacgccttcagtgagaacccg
ctgcccacagtggagatagccattagaaacacaggtgacgctgaccagtggtgccccctg
ctggagacgctgacagacgcagagatggagaagaagatcagagatcaggacagaaacacg
agacgaatgaggcgactggcgaacacggcacctgcgtggtag
DBGET
integrated database retrieval system
