Cottoperca gobio: 115013813
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Entry
115013813 CDS
T07513
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115013813 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115013813 (exosc9)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115013813 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115013813
NCBI-ProteinID:
XP_029296200
Ensembl:
ENSCGOG00000005661
UniProt:
A0A6J2QFJ3
LinkDB
All DBs
Position
1:21675210..21681132
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AA seq
427 aa
AA seq
DB search
MKDTPLSNCERDFLLKAIEEKKRLDGRQTYDYRKMKITFGTDYGCCFVDLGKTRVMAQVS
GELVAPKENRPNEGIMFFNIELSPMASPAFEQGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHMLNHDGNLMDAASIAAITALCHFRRPDVGIQGDEVTVYTPEER
DPIPLSIYHMPVSVSFSFFQQGTYLLVDPCEREERVMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELISKALENDKRARKAGGRCGFAESMPQERITALKMDK
TSVEMTDVSDRANDIVQKSEAPPQTVPSPVVPIPGVGQVGQGLQNTWGLEDDEEEENGEE
QDEKITEMEEEQHEKEESRGGDVVEISDSEEEEVVILHPETPDKTPKNTGSSFHQKMAAT
SKKRQKK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacgccgctgtctaactgtgagcgggatttcttgctcaaagccatcgaagag
aaaaagcgcctggatggacgacagacctacgactacagaaagatgaagatcacatttggg
actgactatggctgctgctttgttgatctgggaaaaaccagagtcatggcccaggtgtcg
ggtgagctggtggctcctaaagagaatcgaccaaacgagggaatcatgttcttcaacatc
gagctgtcccccatggcctcaccagcatttgaacaaggcagacagtctgagttgtcagtg
aagctaaacagacagctggagagatgcctgaggaactccaagtgcattgataccgagtcc
ctgtgtgtggtgtctggagaaaaggtgtggcagatcagagtggacgttcacatgttgaat
cacgatggaaacctgatggatgctgccagcatcgctgctatcaccgctctgtgccacttc
agacgtcctgacgtgggcatccagggcgatgaagtcacagtgtacactccggaggagaga
gaccccattcctctgagtatctaccacatgcccgtcagtgtcagtttctccttcttccaa
caaggaacctacctgctggtggacccctgtgagcgggaggagagggtgatggacggcttg
ctgatgatcgccatgaacaaacaccgagaaatctgctccatccagtccagcgggggcatc
atgttgcttaaagagcaggttatgagatgcagtaaaatagccagcgtcaaagtgtctgaa
atcacagaactcatcagcaaagccctagagaacgacaagagagcaaggaaggctggtggg
aggtgtggttttgcagagtctatgccacaggagcgaatcacagcactgaaaatggacaag
acctcagtggagatgacagatgtgtcagacagagccaatgacattgtccagaaatccgag
gccccacctcagacggtcccttccccagtggtgcccatcccaggtgtaggtcaggttggg
caggggctgcagaacacgtggggactggaggatgatgaagaggaggaaaatggggaagaa
caggatgaaaaaataacagagatggaagaggaacagcatgaaaaggaggagagcagagga
ggagatgtggttgagatatctgacagtgaagaggaggaagtggtcatacttcatccggag
acaccagacaaaactcctaaaaatacaggatccagtttccaccagaagatggcagcaaca
tcaaagaaaagacagaagaaatga
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