KEGG   Cottoperca gobio: 115013897
Entry
115013897         CDS       T07513                                 
Symbol
sf3a1
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cgob  Cottoperca gobio
Pathway
cgob03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115013897 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgob03041]
    115013897 (sf3a1)
Spliceosome [BR:cgob03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115013897 (sf3a1)
 Complex B
    115013897 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    115013897 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 115013897
NCBI-ProteinID: XP_029296324
Ensembl: ENSCGOG00000006830
UniProt: A0A6J2QEA9
LinkDB
Position
9:5638055..5643434
AA seq 772 aa
MPPGPVQIVQPEPNNKNDAPVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQAMLQAQQLKA
QSQVIQEAVIPKEPPPEYEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLAKLKRESENPREVMDQVKYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEHGHFPPPTTPEELGARILIQE
RYEKYGESEEVEMEVESEDEDDEREARGRGQPSQPDQDTQLQDMDEGSDDDDDGMKAPLP
PDNPMPPPLPPTPDQXIIRKDYDPKASKPPPSIITPDEYLISPITGEKIQASKMQEHMRI
GLLDPRWLEQRDRSIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPS
DLHHQPPMPPMNMSKPSMIRPPHSMVPVRTTLLSAVPVMTRPQMSPVVRLASGQVIASMP
PMIPAPRINVVPMQPSPSHIMAPRPPPMVVPTAFVPAPPIQPPISAPAPPSHPSHDDEPL
NKKMKTEDNLMPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTVPLTDQVSVIK
VKIHEATGMAAGKQKLQLEGIFIKDSNSLAYYNMNNGSVIHLALKERGGRKK
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgccgccggggcctgtacaaattgttcagccggagcccaacaacaagaatgatgcacca
gtagaagaaacaccagccactaaacccattgttggtatcatatatccacctcctgaggtt
cgaaacatagttgacaagacagccagctttgttgccaggaatgggccagagtttgaagca
agaatccgtcagaatgagatcaacaatccaaagtttaatttcctcaaccctaatgacccc
taccatgcctactaccgtcacaaggtcaatgaatttaaggagggcaaagggcaggagcct
tctgcagcagtgcctaaggttatgcagcaggccatgctgcaggctcaacagctaaaggcg
cagtcacaggtgattcaagaggccgttatccccaaagaaccacctcctgagtacgagttc
attgcagatcctccatcgatctcagcatttgatctggatgttgtcaagctcacggctcag
tttgttgctcgcaatggccgccagtttcttactcagctcatgcagaaagaacagaggaac
taccagtttgactttttgcggccacagcacagtctcttcaactacttcactaaactggtt
gagcagtacactaagattctgatccctcccaaaggccttctggccaaattgaagagagaa
tccgagaatccaagagaggttatggatcaggtgaagtaccgtgttgagtgggcaaaattc
caggagcgtgaaagaaagaaggaggaagaggaaagagagaaagaacgggtggcatatgca
caaattgattggcatgactttgtagtggttgagacggtggatttccagccaaacgaacat
ggccacttccccccacctaccacaccagaggaacttggcgctcgcatcctaatccaagag
cgctacgagaagtatggagagagtgaggaggtggagatggaggttgagagtgaggatgaa
gacgatgaacgggaggctcgaggccggggccagccctcgcagcctgaccaagacacccaa
ttacaggacatggatgagggatctgatgacgacgatgatggcatgaaggctcccctgcca
ccagacaaccctatgccaccccctctgcccccaactccagaccagngtatcattcggaag
gactacgatcccaaagcatccaagcctccaccctcaattataactccagacgagtacctc
atctcaccaattactggtgagaagatccaagccagtaagatgcaagagcacatgcgcatt
ggtctgctggatccgcgctggctggagcaaagagaccgcagcatcagagagaggcagacc
gaagatgaagtctatgctcctggtttggatatcgagagcagcttgaaacaactggctgag
aggcgtaccgatatcttcggtgtggaagagacggccatcggtaagaagattggtgaagaa
gaaatccagaagccagaggagaaggttacttgggatggccactcaggaagcatggctcgt
acccagcaggcagcacaggccaacatcactctgcaagagcagatcgaagccattcacaag
gctaaaggactggtgggagaggatgacactaaggagaaaattggcccaagcaagcccagt
gatcttcatcatcagcctcccatgcccccaatgaatatgtctaaaccctcaatgatccgc
ccgccccactctatggtacccgtgcgcaccactctcctgtctgctgtacctgtaatgaca
agaccgcagatgtctcctgtggtccgccttgcatcaggacaagttatagcatcaatgcct
cccatgatccctgctccccgcatcaatgtggtccccatgcagccatcaccatctcacatt
atggcccccagaccacctcccatggttgttccaactgcattcgtccctgcccctccaata
caacccccaatctctgctcctgcaccaccatcacacccatctcacgacgatgagccactc
aacaagaagatgaagacagaggacaaccttatgccagaggaggagttccttcgtagaaat
aagggtcccgtggcagttaaagtacaggtccccaacatgcaggacaagaccgaatggaag
ctgaatggccaagtgctgaatttcactgtcccactcacagatcaggtgtctgttattaaa
gtcaaaatccatgaagctacaggcatggcagcaggaaagcagaagttacagttggagggc
attttcattaaggattccaactccctggcctattacaacatgaacaacggttcagtcatt
cacttggcactaaaggagagaggtggcagaaagaagtga

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