Cottoperca gobio: 115014133
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Entry
115014133 CDS
T07513
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03030
DNA replication
cgob03410
Base excision repair
cgob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115014133 (pole)
03410 Base excision repair
115014133 (pole)
03420 Nucleotide excision repair
115014133 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgob03032
]
115014133 (pole)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115014133 (pole)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
115014133 (pole)
DNA replication proteins [BR:
cgob03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
115014133 (pole)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
115014133 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
DNA_pol_B_exo1
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
CpXC
Motif
Other DBs
NCBI-GeneID:
115014133
NCBI-ProteinID:
XP_029296654
Ensembl:
ENSCGOG00000018371
UniProt:
A0A6J2QF83
LinkDB
All DBs
Position
9:complement(10671321..10689203)
Genome browser
AA seq
2289 aa
AA seq
DB search
MVLHNSGRYKAERGQSRGEQDNQDDGSSALKRLERSQFTDEMDARFGFDRITEPGEKTGW
LINMHPTEILDGDKRMISAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYVSR
KFQGKVSKLEVILKEDLDLPNHLVGLKRSYIKLSFTTLDDLMKVKREISPAVRKNRERES
SNDVYTSMLSSALSGGNVTSAEEDGMSKRISDQLDNIVDMREYDVPYHMRLSIDLKIHVA
HWYNVRYRGSAYLPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYMID
GQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIFVT
YNGDFFDWPFIETRASLHGLNMYREIGFQKDNQGEYKSTQAIHMDSYRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMDPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKMTDDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTIRHAIEEEEKIPLEQVTNFNEVCE
EIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACDFNKHGA
TCQRRMAWQWRGEIMPAGRSEFHRIQQQLESEKFPPFFPNGPPRAFHSLNREEQAKHEKK
RLADYCKRAYKKTHVTKLEQRVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
AQDSGDAAEVKRCKNMEILYDSLQMAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGAN
IITQARELVEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIMV
KEGFTNDQYHELVDPTSLNYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGANLEEVYASVAKVADYWLDVLYSKA
ANMPDTELFELISENRSMSRKLADYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSTHDFDIRSILDWNYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQPLE
AGQAADIEDFGMPPRPLQPAILISTKRKRAFQGEDSQVESQDLELTQSWREILGPPPSMG
KTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGVAQPVGGGVIRDGPTTGLGSFLRR
TARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGATY
KKVNRMLPRSNIVYYLYEYCVPEDMYQKNLNEINADLSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKHIVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALFG
LFIPSQRKAHIFVLDTVRSNQMPNLTNLYTAERTALLEKTSEELLPPEKHNFEVRAENDA
KAIYRALQRTLLNYKEERRGPTLIAVQSNWDLRRLSAGMPVLEEFPVVPVHVVDEISYNV
LDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTILQ
SQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLRSPSSLLFDPALHRTLHNMMKKVFLQLVSEFKRLGS
TVVYGNFNRIMLCTKKRRIDDAISYVEYITNSIHSREIFHSLSISFSRCWEFLLWMDPAN
YGGVKGKLPSSVTFGEEGAKQKKKSRGEADEEGSEDEDEDEVEEDDGETDEVDELIESNW
NIMQYLPQTASCQKYFLMIVSAYVAAVYHSMKEELRRNAPGATPVKRRGGSQASQQVVGD
LSALPGMISFSQEYVSNELTQNFFTITQKIQKKVTGTRSVSQPSEMFPVLPGSHLPLNNP
ALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSMQAQFCDPCNSYILPEVICHQ
CNFCRDLDLCKDPSVTQDGSVLPQWFCSNCQAQYETESIEMALVEALQKKLMSYTLQDLV
CTKCKGVKEANMPLYCKCAGEFDLTFPAKSFSDQITVFQNIASHYSMSFLEETIDWLLVM
SPQISQNAH
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcataacagtggacggtacaaagcggagcgaggacaaagtcgaggagagcag
gacaatcaggacgatggatcctctgccctcaagcggctggagcgcagccagttcaccgac
gagatggatgcccgcttcggtttcgacaggatcacagagccaggggagaaaacaggctgg
ctgatcaacatgcatcctactgaaatcctggatggtgacaagaggatgatcagtgctgtg
gactattatttcatacaggaggatggaagcaggtttaaggtggccctcccattcaagcca
tacttttacattgccacaaaaaagaattgcgagagagaagtaatctcgtacgtgtcgagg
aagtttcaaggaaaggtgtcaaagcttgaagttatcctaaaagaggacctagacctgccg
aaccatctcgttggactgaagagaagctacatcaagctgtcattcaccactttggacgac
ctcatgaaggtcaagcgtgagatctccccggcagtacgcaagaacagagagagggagagt
tccaacgacgtctacacctccatgttatcaagtgccctatcagggggcaatgtgacctcc
gcagaggaggacgggatgtcaaagagaatttcagaccagttagacaacatagtggacatg
agagagtatgatgtgccctatcatatgcgattgtccatcgacctcaagatccacgtggct
cactggtataatgttcgatacagaggcagcgcttacctaccagagattgtacggagagat
gatcttgtggagcgaccagaccctgttgttttggctttcgatatcgagaccaccaaactt
ccactgaaattcccggatgcagagagcgatcagattatgatgatctcctacatgattgat
ggacagggttttttaatcacaaaccgagagattgtctctgagaacattgaagattttgag
ttcactcccaaacctgaatatgaaggaccttttactgttttcaacgaggatgatgaggcg
gctctcattcagagatggtttgatcacgttcaagaaaccaagccaaacatctttgtaacc
tacaatggagacttctttgactggccttttattgagacgcgagcttctctccatgggctg
aacatgtacagggagatcggcttccagaaagataaccagggagagtacaagtccactcaa
gccatccacatggacagctacaggtgggtgaagagagacagctacctgccggtggggagt
cataatctgaaggcagcagcgaaagctaaattgggctacgacccagtggagctggaccca
gaggagatgtgccgcatggcaactgaggagccgcagactttagctacctactctgtgtcc
gatgccgtggccacgtattacctgtacatgaaatatgttcaccccttcatcttcgctctg
tgcaccatcatccccatggaccccgatgaggtgctgcgtaaaggctctgggactctgtgc
gaagctctgctcatggtgcaggccttccacgcaaacatcatcttccccaacaagcaggag
caggtgttcaacaaaatgacagacgacggccacgtcatggactctgagacctacgtgggc
ggccacgtggaggcgctggagtccggcgtgttccgcagtgacatcccctgtcgtttcaaa
atgaacccggctgcgtttgacttccttctgcaaagagttgagaggacgatacgtcacgcc
attgaagaagaggagaaaatccctttagagcaagtcaccaactttaacgaggtttgcgag
gagatcaaaaagaagctgatttccttgaaggaggtcccaaacaggatcgaatgtcccctg
atctaccatctggacgttggggccatgtaccccaatatcatcctcaccaaccgcctgcag
ccatccgctgtggttgatgaggccacgtgtgccgcctgtgactttaacaagcacggtgcc
acctgccagaggagaatggcctggcaatggagaggggaaatcatgcctgccggccgcagt
gagtttcaccgcatccagcagcaacttgagtctgagaagttcccgccatttttccccaac
ggtccacctcgggccttccactctctcaacagggaggagcaggcgaaacatgagaagaaa
cgtctggcagactactgtaagagggcctataagaagacgcacgtcaccaagctggagcag
cgagtcaccaccatctgtcagagagaaaactccttctacgtcgacaccgtgagagctttc
agagatcggcgttatgaattcaaagggctccacaaggtgtggaagaagaaactgtcggca
gctcaggacagcggcgacgctgctgaggtgaagcgctgcaaaaacatggagatcctctac
gattctctacaaatggctcacaagtgtattctcaactctttctacggctacgtcatgagg
aaaggggcgcgctggtactccatggagatggctggcattgtgtgctacaccggagccaac
atcatcactcaggccagagagctcgtcgaacaaatagggaggcccctcgagttggacact
gacggcatctggtgtgtcctccccaacaccttccctgagaactttgtggtgaaaaccagc
aacgagaagaagcccaaggtgaccatctcttacccgggggccatgctgaacatcatggtg
aaggagggcttcaccaacgatcagtaccacgagttggtcgaccccacgtccctcaattac
gaaaccaggtcagagaacagcatcttctttgaggtggacggaccgtacctggccatgatc
ctgcctgcctccaaggaggaagggaagaagctgaagaaaaggtacgcggtgtttaatgag
gacggctctctggctgagctgaagggttttgaagtgaagagaagaggagagcttcagctc
attaagatttttcagtcgtcagtgtttgaggctttcctcaaaggtgccaatctggaggag
gtgtacgcctctgtagccaaagtggctgactactggctggacgttctgtacagcaaggct
gccaacatgccagatacggagctgtttgaactgatttcagagaatcgttcaatgtccagg
aagctggcggactacggagagcagaagtcaacttccatcagcacagctaagagactggct
gagttcctcggagaccaaatggtgaaagacgctggtctgagctgtcgctacgtcatctcc
cgaaaacctgagggttcgcctgtcacagagagagctattcctctggccatcttccaggca
gagcccagtgtgaagaaacatttccttcgtaagtggttgaagatgcccagcacgcatgac
ttcgacatccgctcgatcctcgattggaattattacatagagcggttgggtagtgccatc
cagaaaatcatcaccatccctgcagctcttcaacaggtgaagaatccggtgcccagagtt
aggcaccctgactggcttcacaagaaactcctggagaaaaatgatatctacaagcaaaag
aaaatcagtgagctgttcaccagcgagggcaagagacaggtggcccatcagccccttgag
gcaggccaagccgcggacatagaggactttgggatgccacccagacctctgcagccagcc
atcctcatcagcactaagcggaagcgagcttttcagggagaggacagccaggtggagtcc
caggatttggagctcacacagtcctggagagagattctgggaccacccccatctatgggg
aagacacgggaggagcgtcttgtgtggctgcgttaccataagaagaagtgggagctgcag
ctgaggcagaggaaggagagaaagaagagacggaggctgctggatggtgtcgctcaaccc
gtagggggaggagtgatcagagatggccccaccaccggcctgggaagcttcctccgcaga
acagcacgtagtatcttggacatgccatggcaaattgtgcagattgcagagactagtcac
cccgggctgtacaagttgtgggctgtgattggaaatgacctccattgcatgaagctcaac
atccctcgtgtcttctatgtcaatcagaaagtcccaaaacaggaggagggagccacgtac
aaaaaggtgaaccgcatgctgcctcgctccaacatagtgtactacctttatgagtactgt
gtcccagaggacatgtaccagaagaacctcaatgagatcaacgctgacctgtcggccccg
gacatcgaaggagtctatgaaacgcaggtcccattgctgttccgtgcgctggtgcagctc
ggatgtgtgtgtatggtcaataaacatatcgtgagggatctggccggcagggaggccgac
acttttgacctggagcatcttgagatgagatctctggctcagttcagctacctggaacct
gggagtgttcgccacatgtacctgtatcatcacagtcagggtcacaaggctctgtttggc
ctgttcatcccctctcagcgcaaagcccacatctttgtcctggacacagtcagaagcaac
cagatgcccaacctgactaacctctacacagctgaacgcactgctctcctggagaagacg
agcgaggagcttcttcctccagagaaacacaactttgaggtccgagctgaaaacgacgca
aaggctatttaccgcgccctgcagcgcacactgctgaactacaaggaggagcgtcgtggg
cccaccctcatcgcagtgcagtcaaactgggatttgcggcggttgtcagcagggatgccg
gtgcttgaggagtttccagtcgttcccgtacatgttgttgatgagattagctacaacgtg
ctggactggcaacgccacggtgcccggcgcatgatccgccactacctcaacctggacagc
tgcctgtcacaggctttcgatatggcgaggtattaccacttacctgtggggaacttgcct
caggatgtgtccatctttggctcagacttgttcctggcaagacatctgcggaaacacaac
cacctgctgtggctctcgcccacagccaggcccgacctcggaggaaaagaggctgacgac
agtcgtctggtgatggaaagtgatgacaggggttctgtggagatcaatgctcaaggatgc
tattccacagtgtgtgtggagttggacctgcagagccttgcggtgaacaccatcctccaa
tcacaacatgtcaatgacatggagggcggagcaagtctgggtgtcagttttgatgtgata
cagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctctcgctagc
tatgatgagactgctctctgctccaacaccttcaggatcttgaagagcatggtggttgga
tgggtcagagagatcacacagtaccacaacgtgtatgcagacaaccaggtgatgcacttc
taccgctggctgcgctcccccagctctctgctctttgaccccgcactgcaccgcaccctg
cacaacatgatgaagaaggtgtttctacagttggtttcagagttcaaacgtctcggctcc
actgtggtgtatggaaacttcaacaggatcatgttgtgcaccaaaaaacggaggatagat
gatgccattagttatgtggaatacatcaccaacagcatccactccagagaaatcttccac
tctttgtccatctccttctcccgatgctgggagttcctgctgtggatggatcccgccaac
tacggcggcgtgaagggcaaactgccctccagcgtcacgtttggagaggaaggagccaaa
cagaagaaaaagagccgaggggaggccgatgaggagggcagtgaggatgaagatgaggat
gaagttgaggaagatgacggggagacggatgaggtggatgagctcattgagagcaactgg
aacatcatgcagtatctgcctcaaactgcctcctgtcagaaatacttcctcatgatcgtc
tccgcctacgttgcagcggtctaccacagcatgaaagaggagctgagacgtaacgctccc
ggagcaacgccagtcaagaggcgtggaggcagccaggcttcccagcaggttgtgggggac
ttgagtgctcttcctggaatgatctctttctcccaggaatatgtgtccaacgagttgacg
cagaacttttttaccatcactcaaaagatccagaagaaggtgacgggtaccaggagtgtc
agccagccctcagagatgttccccgtcctgcctggatcccacctgccactcaacaaccca
gcgctggagtttatcaaatatgtctgccaggtcctttcactggatgccaacatagttaac
caggtgaacaagctgaagagagacctcctgcgtctcgtggacgtcggagagttttcaatg
caagcccagttctgtgacccctgtaactcctacatcctgccagaggttatctgccaccaa
tgcaatttctgtcgtgacctcgacctctgcaaggacccatctgtgacacaagatggatcg
gttttgcctcagtggttctgctccaactgccaggcgcagtatgagacggagtctattgag
atggctctggtggaagctctgcagaagaaactgatgagctacacgctgcaggacctggtg
tgtacaaaatgtaaaggagtgaaggaagcaaacatgcccctgtactgcaaatgtgccgga
gaatttgacctcactttcccagccaagagcttctctgatcagatcacggtgtttcagaac
atagcgtcccactacagcatgagcttcctggaggagaccatcgactggttgcttgtcatg
agcccacagatcagccagaacgcccactga
DBGET
integrated database retrieval system
