Cottoperca gobio: 115014134
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Entry
115014134 CDS
T07513
Symbol
pdlim5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cgob
Cottoperca gobio
Pathway
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115014134 (pdlim5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
115014134 (pdlim5)
Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115014134 (pdlim5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
zf-C3HC4_3
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
115014134
NCBI-ProteinID:
XP_029296655
UniProt:
A0A6J2QGT7
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All DBs
Position
9:complement(12824319..12883887)
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AA seq
446 aa
AA seq
DB search
MSRSYSVTLLGPAPWGFRLQGGKDFNMPLTISRLTDGGKAAKGGIGIGDKVMSIDGIATE
GMNHLEAQNKIKSCTGNLSLNLQKVSSASKPPPVAPKTAAPPQVTNGPQSILKVPRKHIV
DTDIHFYHVPSHADASRKRIMEDTEDWRPRSGTTQSRSFRILAQITGTERAQDQEADTDK
KTNEEGEEPEPDSHESAVIKTMTKAPTAIQGRLPKVGLITPSFGMKGNGSASVPRRPVPA
RPIPQPHPKDEDTLVQMAEHIPAGYRTPMCAHCNMVIRGPFLVALGKSWHKEEFNCAHCR
KSMADVGFVEEQGSVYCEHCYEDFFAPTCSRCQAKILGEVINALKQTWHVYCFLCVSCQQ
PIRNNTFHLEDGEPYCEQDFYSMFGTGCHGCEFPIEAGDKFLEALGCTWHDTCFVCAVCC
TTLEGQTFFSKKDKPLCKKHAHTVKI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagctacagcgtcactctcttgggcccagccccctggggcttcaggctgcag
ggagggaaagacttcaacatgcccctcaccatctccaggctgacagatggtgggaaggcg
gctaaaggtggcattggtattggagacaaggttatgtctattgacggcatcgccacggag
ggtatgaaccacctggaggcccagaacaagatcaagagctgcactggcaacctcagcctc
aacctgcagaaggtctccagtgcttctaaacctcctcctgtggcaccaaagactgcagct
cctcctcaagtcacaaatggacctcaaagtattttgaaagttcccaggaaacacattgtg
gacacagacatccatttttaccatgtgcccagtcatgccgatgccagcagaaagcgcata
atggaggacacagaggactggcgcccacgctccggcaccacccagtccaggtccttcagg
attctggctcagatcaccggtaccgagcgtgctcaagatcaggaagctgacacagacaag
aagacaaatgaggagggagaggagccagaacccgacagccatgagtctgcagtcatcaag
accatgaccaaagcaccaactgcaatccagggtcgacttccaaaggttggtttgatcacc
ccatcttttggtatgaagggtaacggaagtgccagtgtcccaaggcgtcctgtcccagcc
cgacctatacctcagccccacccgaaagatgaggacaccttggtccagatggccgagcac
atccctgctgggtatcgtacgcccatgtgtgcccactgcaacatggtcatcagagggcca
tttttggtagcactggggaaatcatggcataaggaggaattcaactgtgctcactgccgt
aaatccatggcagatgtaggctttgtggaagaacagggatctgtctactgtgaacactgc
tatgaagatttcttcgctccaacatgcagccgctgccaggccaagatactgggggaggtg
ataaatgccctcaaacagacgtggcatgtctactgctttctatgtgtttcctgtcagcag
ccaatcagaaacaacaccttccacctggaggatggagaaccatactgtgaacaagacttc
tacagtatgtttgggaccggctgccatggctgtgagttccctattgaagctggagacaag
ttcctggaggcccttggttgcacctggcatgatacctgcttcgtctgcgctgtgtgctgc
accactctggaaggccagaccttcttctccaagaaagacaaacctctttgcaagaaacat
gctcacacagtgaagatatga
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