Cottoperca gobio: 115014341
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Entry
115014341 CDS
T07513
Symbol
synpo
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
cgob
Cottoperca gobio
Pathway
cgob04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115014341 (synpo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
115014341
NCBI-ProteinID:
XP_029296973
Ensembl:
ENSCGOG00000010162
UniProt:
A0A6J2QEW5
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All DBs
Position
10:16898065..16915769
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AA seq
1199 aa
AA seq
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MTDSIASTSLPACLPGCVLDCGAKEIRSCVSLQKGGVKLSDAVKLKTLVEVQQNSGALNL
NMKKFFVYSSSLLSQVSTKPYFSLDWLESKAKHNQNHMVQKQLHLTRSASLSEKELKEAR
VRSQIIAAQLTVPSNSSSRGVQLFNRRKQRVSAFTLESCGEGSGGDRVENVKTDPSTNQL
TWAERSTEEKDRDLNFKNSKPLLSPPGTVRSAGDIMEEPGKDFYKEDDMEDSVIQERHFL
PVKEEQEEEEEEEARDKIHKELEDKVKDEIPPGSNNTDPVLMRHAEGEAEINRGHTGPVP
PGKLHNGCHSTSGPGRVPVPTSKQTSTIINRTARPFFSPLTVQSPEAASPVMDIPPPPSY
DTPPLPAFTAPQPLAFSPPPPPPSYPTPPLPAFTNQPPQTYYSSPPLMSPVMSPPLPEFP
VCSVSQYPPMPHYGPPTAPKPSTFVPQPAGERKLITPMKSGILEEGAARRGNRKSMFTFK
EKTVVAPNPELLSLVQGVDERKKHGHRSMPEPASEEELLALGAEASNFLAKEEDRAEEAR
SPEWASCLKTSRTRPRADHMPEQSLTNVSGKGAELFAKRQSRMEKYVVEKQNSGQIRSPS
PTMSLPPSWVYPANMPGRVKAIAKNSDMGAQLSQNLQAQQAVKQKPRQKAPAPEPIPEPP
LENGCSKIEMDLSRHRPYQLSSSLFILNPVKDPLSTLPRGAPQSKNLISTQPFSRQTALL
HNPPSHFSTQHMSSQMPLSPTRGGAEYPPNPAYGQPRISSPMSAFSPERVSSPRSGVQAP
RPMFSAKKAGIAPQTPKDSSSVETPSETPTPTRTPILTRRFSSPEGPATGTWTPSIQTNR
PSTTITSRSVTSPVSSPRGTRCQSPMASQNIQFSAVTSTTTSRPSQTFTATSPRSPPWGS
RCQSPMVNQNTQSSSISSITGYRPSQTSMTTSPLSPPWGSRCQSPMVNQYTQSSTVTSTS
TSRPSQTSTATSPRSPPWGSRCQSPMLSQNSQSSTISFVPTSRPTQTSKATSPVSPPWGS
RSQSPALSQTSLSFPATKPLYTSSATSSVPPPKDSRCMSPNVNNPDSKANHRLLAKNIIN
AAKRKNSPSPGALSGHSLPISPLGNSHHGYDCHKPPISHFQSRAFGAQSPTFTSPPPTPT
QRICSPVRLYNTRSLTDSDASVESEDSGLRSPGLHSYNTCPRGWGGSLRVKRSTVSTDL
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagcatagcctccacctccctccctgcctgtctgcctggctgtgtgctggac
tgcggagcaaaagaaatccgatcctgtgtctcgctacagaaagggggtgtgaagctatca
gacgcagttaaattgaaaactcttgtggaagtacaacaaaacagcggagctctgaatttg
aacatgaaaaagttctttgtctacagctccagtctgctgagtcaagtgtccacaaagccc
tatttctcgctggattggttggaatcaaaagcaaagcacaatcaaaaccatatggtgcag
aaacaattacatctgaccaggagcgccagtttatcagagaaggagctaaaggaggctcgt
gtcaggagtcagatcatcgctgctcagctcaccgtcccttccaactccagctccagaggc
gtgcaactcttcaaccggcgcaagcagagggtcagcgccttcacgcttgaaagctgcgga
gaggggtcaggcggggacagagttgagaacgtgaaaacagacccctcaactaaccaacta
acatgggcagagaggagcactgaagaaaaagatagagacctgaactttaagaatagcaag
ccactcttgtcaccacctgggacggtacgttcagctggtgatatcatggaggaacccggt
aaagatttctacaaggaagacgacatggaggatagtgttatccaagagagacatttcctc
cctgttaaggaagagcaggaggaagaggaagaggaagaggcaagagataaaatccacaag
gagctcgaggacaaagtcaaggatgagattccccctggaagtaataatactgatccagtt
ctgatgagacatgctgaaggggaggcagagataaataggggccatacagggccagttccc
cctggaaagcttcataatggctgccacagtacctctggacctgggagagtgcctgttcca
acatccaagcagacaagcaccatcatcaatcgaactgccaggccctttttttcgccgctg
acagtgcagtcaccagaggcagccagccctgtcatggacattccccctcctccttcttac
gacactcctcctctccctgctttcactgctcctcaacctttggcgttctcacctcctcct
ccgcctccgtcatatcccacacctcctttaccggcctttacaaaccagcctccgcaaacc
tactactccagtccaccactgatgtctcctgtcatgtcccctccactgcccgagttccct
gtgtgttctgtgtctcagtacccacccatgcctcattatggtcctcccacagctccaaag
ccctccacctttgttcctcagcctgctggagagaggaagctgataacaccaatgaaatca
ggaatacttgaggagggtgctgctagaaggggaaataggaagtcaatgttcacattcaaa
gagaagacagtggtagcgccgaaccctgagctgctctctctggtgcagggggtggatgaa
aggaagaaacatggacatagatctatgcctgagccagcatccgaggaagagttgctggcg
ctgggggcagaggcctccaacttcctcgccaaggaagaggacagggcagaggaggcaaga
tctccagagtgggcttcctgcctcaaaacctccaggacccgtccgagggcagatcacatg
ccagagcagagcctcaccaatgtatcaggaaagggggctgagctgtttgcaaagcgtcag
tccaggatggagaaatatgtggttgagaagcaaaattcaggacagattaggtctccttct
cccactatgtctctgccaccatcttgggtgtacccagcaaacatgcccggcagggtcaag
gctattgctaaaaactctgacatgggtgctcagctttcacaaaacctacaggcccaacaa
gcagtcaagcaaaaaccaagacaaaaagctccagcaccagagccaattccagagcctcct
ttagaaaatggttgctccaagatagagatggacctgtcaaggcaccggccctaccagctt
tcctcttccctcttcatccttaacccagtcaaggacccccttagtaccttacccagaggt
gcaccgcagtccaagaacctgatatctacccagcctttctcgagacagactgccttactt
cataaccctccttctcacttcagtacccagcatatgtcttcacagatgcctctcagcccc
acaagaggaggagcagaatatccaccaaatccagcctatgggcagccaaggatcagttct
cctatgtcggccttttctccagagcgagtgtcctctcctcggtcaggggtccaggcacca
aggcccatgttttctgcaaagaaggcagggattgcaccacagacaccaaaggattcctcc
tcagttgaaacccccagtgagactcccacgccaaccaggacgcccatcctcaccagacgt
ttcagcagcccagagggccctgccactgggacctggactcccagcatccaaactaatcgg
ccgtccactaccatcactagccgctcagttacttctcctgtatcctcgcccaggggtaca
agatgccaatcccctatggccagtcagaatatccaattttctgcggttacctccactaca
acatctagaccctctcaaacatttacagccacctctccacgctcacctccttggggttca
agatgtcagtccccaatggtaaaccagaatacccagtcctctagcatctcctccattact
ggttacagaccatcccagacgtctatgactacttcccctctttctcctccttggggttca
agatgccagtccccaatggtaaaccagtatacccaatcttccactgtcacctccacatcc
acatccaggccatcccaaacatctacagccacatccccacgctctcctccttggggatca
agatgccagtcccccatgttgagccaaaatagccagtcttccaccatttcctttgttcct
acttccagaccaacccaaacatcaaaagccacatctcctgtttctcctccttggggctca
cgttcccagtctcctgcactctctcagaccagtttatccttccctgcgactaaacctctg
tacacatcttctgcaacatcttctgttcccccacccaaagacagtcgctgcatgtcaccc
aatgttaataacccagactctaaagccaaccatcgcctcctggccaagaacatcatcaat
gcagccaaacgtaaaaacagcccctcccctggagcactgagtggtcacagcctccccatc
tcaccactgggaaattcccaccatggctacgactgtcacaaaccacccatcagccatttc
cagtcacgggcatttggggcccagtcccctaccttcaccagtcctcctccaaccccaaca
cagaggatttgctcccctgtgaggctctacaacactcgctccctcaccgactctgatgcc
tctgttgagtctgaagactcaggcctccgatcacccggcctgcactcctacaacacctgc
ccccggggttggggcggtagcctgagggtgaagagaagcactgtctccacggacctgtga
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