Cottoperca gobio: 115014357
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Entry
115014357 CDS
T07513
Symbol
ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
115014357 (ddx41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115014357 (ddx41)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115014357 (ddx41)
Spliceosome [BR:
cgob03041
]
Complex C
Other components
Complex C specific factors
115014357 (ddx41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
zf-CCHC
AAA_22
CMS1
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115014357
NCBI-ProteinID:
XP_029296999
Ensembl:
ENSCGOG00000001317
UniProt:
A0A6J2QG93
LinkDB
All DBs
Position
10:16357527..16362955
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AA seq
614 aa
AA seq
DB search
MESENRPKKRSLGEDERAGSEGSEADDYVPYVPVKIRKHQMLQKMLRLRGKAVDDDQKDS
GGEQRDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMS
VKEMAKGIIYDDPIKTSWKAPRYILNMPSTRNERVRKKFHILVDGDGIPPPIKSFREMKL
PPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEK
RLPFFKREGPYGLIICPSRELARQTHGIIEYYCKLLEEEGTPQLRTALCIGGMSVKDQME
VVKHGVHMMVATPGRLMDLLQKKMVSLDICRYLILDEADRMIDMGFEEDIRTIFSYFKGQ
RQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECL
QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVA
TDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDL
KALLVEAKQKVPPVLQVLQTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTN
IGRKDYLAHSSMDF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaaaatcgacccaaaaagagatcccttggggaggatgaaagagctggctca
gaaggatcggaggctgacgattatgttccgtatgttcctgtcaaaataagaaaacatcaa
atgctccagaagatgttacgtttacgaggaaaggcggtggatgatgatcagaaggacagt
gggggggagcagagggatgaagacgagggtcttggtccacgctccaatgtcagtctcctt
gaccagcatcagcatctcaaagaaaaagcagaagcccgtaaggagtcagccaaggagaag
cagctgaaagaggaagagaagattcttgagagcgttgcagaaggcagagctctgatgtct
gtgaaggaaatggccaaaggtatcatatatgatgatcccataaaaacaagctggaaggca
ccgcgctacatcctaaatatgccaagcactcggaatgagcgcgtcaggaagaagtttcac
atccttgttgatggagacggcatccctcctccaatcaaaagctttagggagatgaaactt
ccaccagcaattctaaaaggtttgaaaaagaagggaattgtgcatcccacaccaattcaa
attcaaggaatccctacagttttgtcaggtcgagacatgattggcatcgccttcactggt
tccggaaagaccttggtcttcactctgcccatcatcatgttttccctggagcaggagaaa
aggcttcctttctttaagagagaaggaccatatggactcatcatctgtccttcacgagag
ttggcgaggcagactcacggcatcattgagtactactgtaagctgctggaggaggaagga
actcctcagctgcgcactgccctctgcatcggaggaatgtctgtcaaggaccagatggaa
gtagtaaaacatggtgtccacatgatggtcgctacccctggcagactgatggacttgctg
cagaagaagatggtgagtctggacatctgccgctacttgattctggatgaggctgatagg
atgattgacatgggctttgaggaagacatcagaaccatcttctcctatttcaagggacaa
agacaaaccctgcttttcagtgccactatgcccaagaagatccagaactttgccaagagt
gcactcgtgaagcctatcactatcaacgtgggccgggccggagctgccagcttggatgtc
atccaggaagtggaatacgtcaaagaggaagcgaagatggtgtacttgctcgagtgtctc
cagaaaacaccacctcctgtgctgatatttgctgagaagaaggccgatgtagatgcaatc
catgagtatctgctgctaaaaggagtcgaggcggtggccatccatggaggaaaagaccag
gaggaaagaacaaaagccatagaggcatttaaagaaggaaagaaagatgtcttagttgcc
acagacgttgcatccaagggtctggatttcccagcgatacagcatgtagtgaattatgac
atgcctgaggagatagagaactatgtccacagaattggaagaactgggcgatcgggcaaa
accggtattgccactacgttcatcaataaaggctgtgatgagtcagtgttgatggatctc
aaagccctgctcgttgaagccaagcagaaggttcctccggtcctccaggtgctccagacc
ggagacgagaccatgctggacattggaggagagaggggctgtacattctgtggcggtctg
ggtcatcgtattacagactgtcctaaattggaggccatgcagaccaagcaggtcaccaac
atcgggcggaaagactacctggctcatagctcaatggacttctaa
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