KEGG   Cottoperca gobio: 115014357
Entry
115014357         CDS       T07513                                 
Symbol
ddx41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:5.6.2.7]
Organism
cgob  Cottoperca gobio
Pathway
cgob04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cgob00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    115014357 (ddx41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgob03041]
    115014357 (ddx41)
Enzymes [BR:cgob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     115014357 (ddx41)
Spliceosome [BR:cgob03041]
 Complex C
  Other components
   Complex C specific factors
    115014357 (ddx41)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC AAA_22 CMS1 Utp25_C Cas3-like_C_2
Other DBs
NCBI-GeneID: 115014357
NCBI-ProteinID: XP_029296999
Ensembl: ENSCGOG00000001317
UniProt: A0A6J2QG93
LinkDB
Position
10:16357527..16362955
AA seq 614 aa
MESENRPKKRSLGEDERAGSEGSEADDYVPYVPVKIRKHQMLQKMLRLRGKAVDDDQKDS
GGEQRDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMS
VKEMAKGIIYDDPIKTSWKAPRYILNMPSTRNERVRKKFHILVDGDGIPPPIKSFREMKL
PPAILKGLKKKGIVHPTPIQIQGIPTVLSGRDMIGIAFTGSGKTLVFTLPIIMFSLEQEK
RLPFFKREGPYGLIICPSRELARQTHGIIEYYCKLLEEEGTPQLRTALCIGGMSVKDQME
VVKHGVHMMVATPGRLMDLLQKKMVSLDICRYLILDEADRMIDMGFEEDIRTIFSYFKGQ
RQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECL
QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVA
TDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDL
KALLVEAKQKVPPVLQVLQTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTN
IGRKDYLAHSSMDF
NT seq 1845 nt   +upstreamnt  +downstreamnt
atggagtccgaaaatcgacccaaaaagagatcccttggggaggatgaaagagctggctca
gaaggatcggaggctgacgattatgttccgtatgttcctgtcaaaataagaaaacatcaa
atgctccagaagatgttacgtttacgaggaaaggcggtggatgatgatcagaaggacagt
gggggggagcagagggatgaagacgagggtcttggtccacgctccaatgtcagtctcctt
gaccagcatcagcatctcaaagaaaaagcagaagcccgtaaggagtcagccaaggagaag
cagctgaaagaggaagagaagattcttgagagcgttgcagaaggcagagctctgatgtct
gtgaaggaaatggccaaaggtatcatatatgatgatcccataaaaacaagctggaaggca
ccgcgctacatcctaaatatgccaagcactcggaatgagcgcgtcaggaagaagtttcac
atccttgttgatggagacggcatccctcctccaatcaaaagctttagggagatgaaactt
ccaccagcaattctaaaaggtttgaaaaagaagggaattgtgcatcccacaccaattcaa
attcaaggaatccctacagttttgtcaggtcgagacatgattggcatcgccttcactggt
tccggaaagaccttggtcttcactctgcccatcatcatgttttccctggagcaggagaaa
aggcttcctttctttaagagagaaggaccatatggactcatcatctgtccttcacgagag
ttggcgaggcagactcacggcatcattgagtactactgtaagctgctggaggaggaagga
actcctcagctgcgcactgccctctgcatcggaggaatgtctgtcaaggaccagatggaa
gtagtaaaacatggtgtccacatgatggtcgctacccctggcagactgatggacttgctg
cagaagaagatggtgagtctggacatctgccgctacttgattctggatgaggctgatagg
atgattgacatgggctttgaggaagacatcagaaccatcttctcctatttcaagggacaa
agacaaaccctgcttttcagtgccactatgcccaagaagatccagaactttgccaagagt
gcactcgtgaagcctatcactatcaacgtgggccgggccggagctgccagcttggatgtc
atccaggaagtggaatacgtcaaagaggaagcgaagatggtgtacttgctcgagtgtctc
cagaaaacaccacctcctgtgctgatatttgctgagaagaaggccgatgtagatgcaatc
catgagtatctgctgctaaaaggagtcgaggcggtggccatccatggaggaaaagaccag
gaggaaagaacaaaagccatagaggcatttaaagaaggaaagaaagatgtcttagttgcc
acagacgttgcatccaagggtctggatttcccagcgatacagcatgtagtgaattatgac
atgcctgaggagatagagaactatgtccacagaattggaagaactgggcgatcgggcaaa
accggtattgccactacgttcatcaataaaggctgtgatgagtcagtgttgatggatctc
aaagccctgctcgttgaagccaagcagaaggttcctccggtcctccaggtgctccagacc
ggagacgagaccatgctggacattggaggagagaggggctgtacattctgtggcggtctg
ggtcatcgtattacagactgtcctaaattggaggccatgcagaccaagcaggtcaccaac
atcgggcggaaagactacctggctcatagctcaatggacttctaa

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