Cottoperca gobio: 115014399
Help
Entry
115014399 CDS
T07513
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115014399
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115014399
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115014399
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115014399
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Protocadherins
115014399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
DUF6377
Motif
Other DBs
NCBI-GeneID:
115014399
NCBI-ProteinID:
XP_029297066
Ensembl:
ENSCGOG00000017292
UniProt:
A0A6J2QHG3
LinkDB
All DBs
Position
10:11151396..11275165
Genome browser
AA seq
1267 aa
AA seq
DB search
MDLASQTHVLVVLLTCVVFLCRAQERDYTVKEEQPENVRIGNLRKDLDLNLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFAEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTIS
DVNDNRPVFKDSELEVTVPENAPTGTSVAQLHASDADLGSNAQIHFAFSNQISASTKRHF
AIDSSTGLITVRQPLDREVTPVHKLIVLASDGSSTPSRATVVVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTV
IARDNGSASLQNNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNSIITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDAGQPPSSSYAKVT
INVVDVNDNRPVFVIPSSNYSYDLVRTTVTPGAVVTRVFAIDNDTGMNAELQYSIISSII
ITSRVSPRGLFAIDKTTGNITLQEKVVAADQGLHRLVVKVKDLGQPESLHAIALIHLFVN
DTVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDP
SHEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTAGQITTRQNLSQ
TPENCFNSPPPICPHKEACQLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAS
TTQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPALAQFQGPGINSPTSTPITTAITGTMPSFGFQQSCARGAKVNMISMGVMDGR
HTLGRSVPKKDELDKGINRPQFYNTLDRHCSKKEDTIKVIPLASFSSPGQQTPTGGGSSS
FLHEHQL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcaagtcagactcatgtgctggtggtcttgctcacctgtgtggtcttccta
tgccgggcccaggagagggactacacggtgaaggaggagcagccggagaacgtccgtatc
ggcaacctccgcaaggacctggacctcaacctggaccccaacatccggctatcctcaccg
ctgcagttcaagcctgtgtacaagacaggtgacgtgcctttggtgagggtggaggccaac
acaggggagatctttaccaccaatcacagaatcgaccgggagaagctgtgctcaggggtc
ttcgctgagaaacgctgctactatgagattgaggtggccgtgctgccagatgaaatcttc
agattggtcaagatccgcttcctgatcgaggatgtaaatgacaacgcaccacttttccag
tccactgtaataaacatctctatcccggagaacacggccatcaacacccgctacccggtg
ccctcagcatttgaccctgatgttgggatcaatgggattcaacattatgaactggtcaag
agtgtcagcgagtttggcttagacatcatagagactcctgaaggtgacaagtggccgcag
cttatcgttcagcagaacctggatcgtgagcagaaggacacctttgtcatgaagataaag
gttgaggatggtggaaaccctcccaagtccagcactgccatcctccaagtcaccatctcc
gatgtcaatgacaatcgtcccgtcttcaaggacagtgagctggaggtcacagtgccagag
aatgcccccacggggacatcggttgctcagcttcacgcttcagacgcagacctgggttcc
aatgcacagatccacttcgccttcagcaaccagatctctgcctcaaccaaacgtcacttt
gccatcgacagctccacgggactgatcactgtgaggcagccactggacagggaagtaact
cctgttcacaaacttattgtccttgccagtgatggcagctctaccccctccagagccaca
gtggttgttaatgtaacagatgttaatgacaatgttccctccatagacacacgctacatt
atcaacctggttaatggaactgttctgctgtctgagaatgcacctcttaacaccaaaata
gcactcatcactgttactgacaaggatgcagatctttatggcaaagtagcttgctacact
gaccatgatgttccttttcggttgaagcctgtctttaatgatcaattcttactagagaca
gctgcccccctagattatgagacgactcgagaatatgcaattaagatagtggcttcggat
agggggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaac
gacaacgcacccatctttccccagccggaaatccaactttccataccggagaacaatgac
ccctctacacagttaataaaaatcagcgccactgacgcagacagcggacataatgctgag
attatttatactcttggccctgatgcgcctgacgggtttaacatagacagacggtcagga
attctctccgttggcaaacgactggacagagagaagcaagagaggtactcattcactgtc
atagcgagggacaatggctccgcttccctgcagaacaatgtcactgtcaggctaatcgtc
caggaccttaatgacaacagcccagctttcacacatcctgagtacaacttctatgtgcct
gagaacctgcctctctatggaactgtgggcttaatcacagtgacggatgcagatgcggga
gacaattcgattataaccctgtccgttttgaacgggaaagataatttcatcatcgacccc
caaactggtgtgatcaagcccaatatcacttttgatagggagcagcaaagctcctacaca
tttatggtcaaggcagttgatgcagggcaacctccaagctcctcctacgccaaggtcact
ataaatgtagtcgatgtgaacgacaatcgccctgtgttcgtcatcccatcctccaattac
tcatatgacctagtgcgaaccaccgtcacccctggcgcagtggttaccagagtatttgcc
attgacaatgacacaggtatgaatgctgagctgcagtacagcattatcagcagcatcatc
atcacatctagggtctctcctcgaggtctttttgccatcgacaaaacaacgggtaacata
acactacaggagaaagtagtggcagctgatcaggggctgcataggctggtagtcaaggtc
aaagatctaggtcagcctgagtcattacatgctatcgcacttattcacttgtttgtcaat
gacactgtgtcaaatgctacctttatccaagagcagctgcgaaaaagtatggagacaccc
ttggatcgtaacataggggacagtgaggtaacacctcaagccaatggatatgtaattgtt
gtcatagcaatcatagcagggaccatgactgtcatcttggtgatatttgtgactgccttg
gtgcgctgccgacagacacccagacacaaagtggtacagaagggcaagcagagtggcgag
tgggtgtcacccaaccaagacaaccgtcagatcaagaagaagaagaagagaaagaagcga
tcccccaagagcctcctcttgaactttgtgaccattgatgaatccaagcctgacgacccc
agccatgagcatgttaatggtacactggatctccctgtggagttggaggagcaaaccatg
gggaagtacaactgggctacaacacccaccaccttcaaacccgacagcccagatttggcc
aagcattacaagtccgcgtcccctcagcctacatttcaaatcaaaccggagactccagtg
gccccaaagaaacatcatgtgatccaggagctccccttggacaacacgttcgtggtgggc
tgtgactcactctccaagtgctcatcgactagctccgacccgtacagtgtctcagagtgc
agctgtcaggggggattcaagactgcggggcaaatcaccacccgacagaacctgagccag
acaccggagaactgttttaactcaccgccccccatttgtcctcataaggaggcctgtcaa
cttggcaagataacttctgtgaatacccagcgccgcgtgacattccatcttccagacggt
tcccaggagagctgcagtgacagcgggctgggagacccggagccaagcagcacggccagc
accacccagcctcttcccctcagcttcccccaggaggagtactatgagcaaacatcacct
aacagccgcaccgagggagatggaaactcagaccctgaatctaccatcgaggtgaaccta
cagaaagccttggctgaggcctctgagacctgtacccaggagtgtctgatactgggccac
tccgacagctgctggatgcccccggccctggcccagttccagggtcctggcataaacagc
cccacctccacccctatcaccaccgccatcaccggtacaatgccctcctttggcttccag
cagagctgcgcccggggagccaaagttaacatgatcagcatgggggtcatggatggtcgc
cataccctgggcaggtctgtgcccaaaaaagatgaactggacaaagggatcaaccggccg
cagttctacaacaccctggatagacactgcagtaagaaggaggacaccatcaaagtcatc
cccctggcgagcttctcctcccccgggcagcagacgcccaccggcgggggcagcagctct
ttcttacatgagcaccagttgtaa
DBGET
integrated database retrieval system
