Cottoperca gobio: 115014457
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Entry
115014457 CDS
T07513
Symbol
polr1a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115014457 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115014457 (polr1a)
Enzymes [BR:
cgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115014457 (polr1a)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115014457 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF4604
CDC45
Nop14
DUF2277
SURF2
Motif
Other DBs
NCBI-GeneID:
115014457
NCBI-ProteinID:
XP_029297172
Ensembl:
ENSCGOG00000021951
UniProt:
A0A6J2QIN9
LinkDB
All DBs
Position
10:21747017..21774361
Genome browser
AA seq
1690 aa
AA seq
DB search
MLFSKEVPWRRLEGLSFGMYSAEEIRKLSVKTITNFRFLDAVGNVAPNSLYDLALGPVDS
KEVCSTCCQDFNNCPGHLGHVELPLPVYNPLFFDKLYLLIRGSCLSCHMLTCTRAAMHLL
RNQIKLVDHGYMQEVYQIEQVLSQLLDENPKATGDEIEEVLKQFTNTVVGVNAEGTENTK
PIKHLVEKKGSLINDFWRLHMKSRKCPYCSSGRFTVRREYNSKLIVTMPSGVQTIGNTDE
DLIAGQRVYLTASTAREHSNKLWGKEGFFLKCLFSGLEENTLSQEGEEGFYPDLFFLELL
VVPPCRYRPINRLGDQMFTNGQTVNMQAVMKDCGLIRKLLAVIAGEKTAPEEEPLDQTFL
AGILGQTLTDKLYNIWIRLQTHVNIVFDSDMDKMTTEKFPGIRQILEKKDGLFRKHMMGK
RVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNIHPGAS
MVINEDGRRTILSPTSLVQREAVAKQLMTPCDGPHKMPMKIVNRHIKNGDVMLLNRQPTL
HRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELARAEAYTLLSTDQ
QYLVPKDGTPLAGLIQDHMVSGTRMTIRGCFFTRVQYIELVYRGLTDKPGRVQLLPPAIL
KPQQLWTGKQVVSTLLLNVXPKEAVPLNLVGKSKIPSKAWIQVPPRASPGYKPDSMCDSQ
VVFRQGELLVGVLDKAHYGSSSYGLVHCCYELYGGATSGKLLSCLARLFTAYLQLYRGFT
LGVEDILVKPGANKRRKKIIAESLKIGTKALQAAFNLPPNVDQAEAQSRWQDAHLNPDQK
DFSTADHKFKEVANQVNNDINKVCMPVGLHTSFPDNNLQLMVQSGAKGSTVNTMQISCLL
GQIELEGRRPPLMPSGKSLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGREGLV
DTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTPFLQARQ
FPFIEDNYEVIKKSQCLDEVLARLDPQTASRHFASIQRWRAKRAVACPRRGGFLLFSQKK
LAKLKETEPATEPDVNGRKASILQLVQQWHSLDESSRLKYCRKASRCPEPSLDLLRPDVC
FGSVSENFHSITEKYLQNEGRLRQDGLETQSLRQLLHYKWQRSLCDPGEAVGLLAAQSIG
EPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSVPVLNTKKALKRAKT
LRKQLSRVCLAEVLQKVDVVETLRIEDYLKLRVFKITFHFLPPDRYCDDKLLSPQEILHY
METRFFRLLLEAIKKRSAKLASIAVETRKAAPRDKDNDGEGTADTAGLDGAEEEERQIVD
DQGNEGDADATDAKRKDKQQEEVDYESEEEDKGEDDDDKEDQAEEEEEVEEENAKDALEE
SQQESAGVRTEKKKRKRSKQGGEEEALDQMRINSVLESNSVIERYCYDQHHELWCEVDLV
LPMSKVHFDLTSVLSTLAQNAVLVETKGLTRCLLSEITTKTGEKETVLNTEGINMHELFK
HSDILDTNRLYSNEVHAMAKTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCF
EGVYRPLNRHAIRSNSSPLQQMTFETSFKFLKQATMLGSHDQLVSPSACLVVGKVVKGGT
GLFELKQPLQ
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttagtaaagaagtaccatggcggcgactggagggcctgtcgtttggcatgtac
tctgccgaagagataaggaagctgagtgtgaagacgatcactaacttccggttcctcgat
gctgttgggaatgtggccccgaacagcctgtacgatctggccctgggaccagtagacagc
aaagaggtgtgttcaacttgctgtcaggacttcaacaactgtccaggacacttggggcat
gtagagctaccgctacctgtatacaacccgctcttctttgataaactctacctgctgatt
cgtggctcctgtctttcatgtcacatgttaacgtgtacccgagctgccatgcacctgctg
cggaaccagatcaagttggtggaccatggatacatgcaggaggtctaccaaatcgaacaa
gtcctcagccagctcctggatgagaaccccaaagccactggagatgagattgaggaggtg
ctgaagcagtttacaaacacggtagttggcgtgaacgctgaaggtacagagaacaccaaa
ccgattaaacaccttgttgaaaagaagggcagtttgataaatgacttctggaggctccac
atgaaatctaggaagtgcccttactgcagtagtggcaggtttacagtgcgccgtgaatac
aacagtaagctgattgtcacaatgccatcaggagtgcagaccatcggcaacactgacgag
gatctgattgctggacagagagtctacctgacggcgagtacagctagagaacacagcaac
aaactgtgggggaaagaaggtttcttcttgaagtgtctgttctctgggctggaggagaat
acgctgtcacaggagggagaggagggtttctatccagacctcttcttcctagagctgctg
gtggtcccaccgtgcaggtatcgtccaataaatcgtctgggtgaccagatgtttacaaac
ggtcagacagtcaacatgcaggcagtcatgaaggactgtggactcatcaggaaacttctg
gctgtcatagcaggggagaaaactgctccggaggaagagcctcttgaccagacgtttctg
gcggggattctcgggcagacactcacagataaactctacaacatctggatccgattgcag
acccacgtcaacatcgtttttgacagtgacatggacaaaatgacgacggagaaattccct
ggaatcagacagatcttggagaagaaggacggattgttccggaaacacatgatggggaaa
cgagtggactacgctgcacggtcggtcatctgtccagacatgtacatcgggaccaacgag
atcggaataccgatggtgtttgccaccaagctgacgtacccgcagcccgtcactccgtgg
aacgtgaaggagcttcgtcaggccgttctcaacggacccaacatccaccccggcgcctcc
atggtaattaacgaggacggcaggagaaccatcctctcacctaccagccttgtgcagaga
gaagcggttgccaagcaactgatgacaccctgcgacggtccacataagatgcccatgaag
atcgtgaatcgtcacataaagaacggagatgtgatgttactgaacagacagccaactctg
cacagaccctccatacaagcccactgcgctcgcatcctgccaggagagaaggttctaagg
ctccactatgccaactgcaaggcgtacaatgctgactttgatggagacgaaatgaacgcg
cacttccctcaaagtgagctggccagagcagaggcctacacgttactcagcactgaccag
cagtacctcgtccccaaggatggtacacctttagcgggtctgatccaggaccacatggta
tcagggacgaggatgacgatacgaggctgtttcttcaccagagtccagtacattgagttg
gtgtacagaggactgactgacaaacccggcagagttcaactgctgccgccggccatactc
aaaccacagcagctgtggacaggaaagcaggtggtgtcgacgctcctgctgaatgtanat
ccaaaggaggccgtgcctctcaacctggttggtaaatcaaaaatccccagcaaagcatgg
atccaagtgccaccacgagcatctccaggatacaaacctgacagcatgtgtgactcacag
gtggtgttccgtcagggggagctgttggtgggggttctggacaaagcgcactacggctcc
tcttcctatggcctggtccactgctgctatgagctgtacggaggagcgaccagcggcaaa
ctgctcagctgtctggctcgactcttcacggcttacctgcagctatacagaggcttcact
ctgggtgtggaagacatcctggtgaaaccgggcgccaacaagcggaggaaaaaaatcatt
gcagaatccctgaagattggcaccaaagccctccaagcagccttcaacctgccccccaat
gtggatcaagctgaggcgcagagccgctggcaggacgctcacctcaacccggaccagaaa
gacttcagcacggccgaccacaagttcaaagaagtggccaaccaagtgaacaatgacata
aacaaggtgtgcatgccagtgggactccacacgtctttcccagacaacaacctccaactg
atggtccaatcaggagccaaggggtctactgtaaacaccatgcagatttcatgtcttcta
ggtcagattgagttggagggccgtaggcctccactgatgccttctgggaaatccttgcca
tgcttccagccatatgacccgtcacccggtgccgggggctttgtttctggaaggttcctc
acaggcatcaaaccacaggagttcttcttccactgtatggccggcagagagggactggtc
gacacagctgtgaaaacatctcgatcaggatacctgcagagatgtgtcataaagcatctg
gagggtttggtagtgcagtatgatctgacggtgagggacagcgacggatccgtggtccag
ttcctgtacggagaagacggactggacatccccaagactccgttcctgcaggccagacag
ttccccttcatagaggacaactacgaggtgatcaagaagtcgcagtgcctggacgaggtt
ctggcacgtttggaccctcagactgccagtcgacactttgcctccatccagcgctggaga
gcaaagcgagcggtggcgtgtccacggagaggagggttcttgctgttttctcaaaagaag
ttggccaaactgaaagagactgaaccagcaacagagccagatgtcaacggcagaaaggct
tctatactgcagctcgtacagcagtggcactctctggatgaatccagcagattgaaatac
tgcaggaaggcctcccgctgccccgagccctctctggacttgttgagacccgacgtctgc
ttcggatcagtgtctgaaaactttcacagcataacagagaaatacctgcagaacgaaggc
aggctgcgtcaggacggcctggaaacacagagcctccggcagctgctgcactataagtgg
cagcgttcactgtgtgatccgggtgaagcagtgggtctgctggcagctcagtccataggc
gagccctccacccagatgaccctcaacaccttccactttgccggcagaggagagatgaac
gtcactttgggaatacctcggctgagagagatcctgatggtggccagctccaacattaaa
actcccatgatgagcgttccagtgctcaacaccaagaaagccttgaagagggccaagacg
ctccgtaagcaactcagcagagtctgtctggctgaggtgctgcagaaggtggatgtagta
gagacattgcggatcgaagattacctaaagctgcgagtgttcaaaatcacctttcacttc
ctgcctcctgaccgttactgtgacgataagctgctatcaccacaggagatcctccactac
atggaaactaggtttttccgtctcctgctggaagccattaagaagcgcagcgccaagctg
gcttccatagccgtggaaacaaggaaggccgctcccagagataaggacaatgatggcgag
ggaacagctgatacggcagggttagatggcgcagaggaagaggagcgacagattgttgat
gaccaggggaacgaaggagacgctgatgcaacagacgccaagcgaaaagacaagcagcaa
gaggaggtggactatgagagtgaggaggaggacaaaggtgaggacgacgacgataaagaa
gatcaggcagaggaagaggaggaggtggaggaggagaatgcaaaggatgcgctggaggaa
tcccagcaagagtctgcaggagtgagaacagagaagaagaagaggaaacgatcaaaacaa
ggcggagaagaagaggccttggatcagatgaggattaactctgttctagagtccaactct
gtgatagagagatactgctacgatcaacaccatgaactctggtgcgaggttgatctggtc
ttaccgatgagcaaggtgcactttgacctgacgtctgtcctgtcaacactggctcagaac
gccgtcctcgtggagaccaaaggcttgacgcgctgcctgctgagcgagatcacaacaaag
acgggagagaaggagacggttctcaacacagaaggcatcaacatgcacgaactgttcaag
cacagtgatatcttggacaccaacagactgtactccaatgaggtgcatgccatggctaaa
acctacgggattgaagtggctctgaaagtcatagagaaggagatcaaagatgtctttgct
gtctatggtatcgaggtggaccccaggcatctgtcactggtggcagattacatgtgtttt
gaaggtgtatacagaccattaaaccggcatgccatccggtccaactcctcccctctgcag
cagatgacctttgagaccagcttcaaattcctcaaacaggctaccatgctggggtcacac
gatcagctagtgtcaccctcagcctgcctggttgtggggaaggtggtcaaaggtggaaca
ggactgtttgaactgaagcaacctctgcagtag
DBGET
integrated database retrieval system
