Cottoperca gobio: 115014543
Help
Entry
115014543 CDS
T07513
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgob
Cottoperca gobio
Pathway
cgob02010
ABC transporters
cgob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115014543
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115014543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgob02000
]
115014543
Transporters [BR:
cgob02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115014543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
115014543
NCBI-ProteinID:
XP_029297362
Ensembl:
ENSCGOG00000000274
UniProt:
A0A6J2QIB9
LinkDB
All DBs
Position
1:15449548..15490423
Genome browser
AA seq
2268 aa
AA seq
DB search
MTVSTQLCLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFLDAKKILLYTQNDR
SYEGYKGLLGALKKMQKNTAHFKLKDFLQDDETLSHFLHHNASLPHHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSRLIQETICNSSSNWLNKAQSHFLSNLDF
FKPIRKDVRSDPKFVQEVSAATDTLLESLGALAVELASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNNSDSDPISAYDNSSTPYC
NSMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGLLRDLGGM
WEEMRPKVWNFMEKGEEMDMVRTLLQNNASAAFLNAQLSGTEWHVSDVSAFLSKVSEDQR
PAGSAYTWRNVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDIAHSNSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSY
LQDVIEHGIIRAITGTKEKTGIYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISAGLLVVLLKMGNLLPYSDP
GVVFLFLSAFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGA
KVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLNSPLEDDSYNLTTSICLMLFDAVLY
GIMTWYFEAVFPGQYGIPRPWYFPFTKTYWCGEKENNNISTPLSKKGNAEAVCIEEEPSH
IEPGVYIENLVKVYSHGNKLAVDGLSLRFYKGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYIHGKDIRSELSTVRQNLGVCPQHNVLFSMLTVQEHIWFYARLKGLPEEKVKAEMEQ
ILMDVGLPHQRHSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYIKKAEKDDTVSESSSDAGLGSEPESETTTIDVSLISNLIFKHVH
EARLVEDLGHEITYVLPYESAKDGAFVELFHELDDRLTDLGISSYGISDTTLEEIFLKVA
EDSGVDAVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFEFNDSEESRETDWLSGSDGK
GSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKY
PSLALDSSMYGEQFTFISNDLPEDPHVNKLLGALTEKPGFGTRCMEGQPIPDTPCTAVEG
EWSAPPVSQSVKDMFDNGNWSMEDPSPMCECSSGGRKRMLPECPAGAGGLPPPEMKISET
DTLQNLTDRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSPLTAHTDEVDDA
IAQLTRRFRLERGTAADRFFNSLSTFMQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNGIL
RASLPSDKDPTKFGITASNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVV
FLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYVVPATLVIIIFMCFQQDAYVSSTN
LPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSN
EIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLF
AMAIEGVIFFCITVLIQYHFFFKARSSTSHLKPIGEEDEDVARERQRILSGGGQSDILEL
KQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDCVVTSGEAYLAG
KSVNTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGL
VKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKEG
RSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRP
VMEFIERELPGSTLKEQHRNMLQYQLPSSLTSLARIFSLLSQNKETLSIEDYSVSQTTLD
QVFVNFAKDQSDEDHLKEAHLNKRDAVVVDVSKLNTFLKDNTTRESCV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgacagtctccactcaactgtgtttactgctttggaagaacttcacctaccgacggaga
cagactatccagctgttgattgagatcatctggcctctgttcatcttcttcatcctcatc
tcagtccgaatacattatccaccctacgagcaacatgaatgccatttccctaacaaggcc
atgccctcagcgggtaccctgccctgggtgcaaggcatcatctgtaacgccaacaacccc
tgcttccgtaatcctactcctggcgagagtcccggggtggtgggaaacttcaatgattcg
ataatctcccgtctgttccttgatgccaagaagatcctgctctacactcagaatgatcga
agctacgagggctacaagggactgctgggggccctcaagaagatgcagaagaacactgct
catttcaagctgaaggactttttgcaagatgatgagaccctttcccacttccttcaccac
aacgcctcacttcctcatcacgcgctgaagcagatagtggaggctgacgtcaatcttgag
aaggtgctgactaaaggttttggcttccatctgagagacctctgtaacaccacgcccctg
gaggagtttgtccacattgccgaccgcaacgtgtcccgtctgattcaagaaactatctgc
aattcctccagcaattggctaaacaaggcccagagccacttcctgtccaacttggacttc
ttcaaacccattcggaaggatgtgaggtcggaccctaaattcgtccaggaagtctccgct
gcaacagacactcttctggagagcctgggagcattggccgtggagcttgccagtatgaag
agttggaaggacatgcgtaaggagatcttgtatctaactgccaatgccacaggatctcca
aaccagatgtaccaggctgtgtcacgtatcgtttgcggacaccccgagggaggcggcctc
aaaatcaagtctctcaactggtatgaagacaacaactacaaggccctgttcggaaaccat
ggcaacaacagcgacagtgatcccatatcagcttacgacaactcttcaactccctattgt
aactccatgatgcgcagcctggagtccagccccatttccaggatgatctggagagctctg
aagcctctgctcatggggaagatcctgtacactccagatactccggccacacagagaatc
atccacgaggttaataagaccttccaggagctcggcctgctgagggaccttggagggatg
tgggaggaaatgaggcccaaagtttggaacttcatggagaaaggcgaggaaatggatatg
gtcaggactctgctccagaataacgccagtgccgcgttccttaacgcacagctcagtggg
actgagtggcatgtgtcagatgtgtcggccttcctgtctaaggtgtcagaggaccaaaga
cctgcaggatccgcctatacctggagaaacgtcttcaacgaaaccgaccaggccatacag
accatctcacgcttcatggagtgtgtgaacctggacaagctggagccagtagctaatgag
gagagactggtcaacaagtccatgggtcttctgaacaaccagaagttctgggctggaatc
gtgttccctgacatcgcccatagcaacagcactgacttgcctcccaacgtcaactataag
atccgcatggatattgataatgtggagaggaccaacaagatcaaagacggctattgggac
cccggtcccagggccgaccccttcgaagaccttcggtatatttggggcggattttcttac
ctgcaggacgtcatcgagcatggaatcatcagagccatcactggcactaaagagaagacg
ggcatctacattcagcagatgccctacccctgctatgtcgatgacatgttcctgcgagtg
atgagtcggtctatgcctctcttcatgaccctggcgtggatgtattcagtagccatcatc
atcaagggcgtcgtatacgagaaggaggcacgtctcaaagagaccatgaggatcatggga
ctgaataacggcaccttgtggctcagctggttcatcagcagtttaatcccactcctgatc
agcgccggcttgttggtggtgttattgaagatgggaaacctgctgccttacagtgaccca
ggcgtggtgtttcttttcctgtcagccttcgccgttgtaaccatcatgcagtgtttcctc
atcagcaccctcttctctcgtgccaacttggcagccgcatgcggtggcattatatacttc
accctctacctgccctacgtgctgtgtgtcgcctggcaagactacgtgggctttggagcc
aaagttatagtgagtctgctctctcctgtggctttcggtttcggctgtgagtactttgcc
ctgtttgaggagcaaggggtgggcatccagtggtccaacctgctgaacagccctctggag
gacgacagctacaacctgaccacctctatctgcctcatgctgtttgatgctgtgctctac
ggaataatgacctggtactttgaagctgtgttccctggccagtatgggatccccaggccc
tggtatttccctttcactaagacgtactggtgtggagagaaagagaacaacaacatttca
actcctttgtcaaagaagggcaacgctgaagccgtgtgcattgaggaggagccaagccac
atcgagccaggtgtttacatcgagaatctggtgaaggtctacagccatggaaacaagctg
gctgtagacggactgtccctgaggttctataaggggcagataacctccttcctcggccac
aatggagctggcaagaccacaactatgtcgatcctcacggggttgtttccacccacatct
ggcaccgcctatatccacggcaaggacatccgcagtgaactcagcactgtccggcagaat
ctgggcgtctgtccccagcacaacgtacttttcagcatgctgacggtgcaggaacacatc
tggttctacgcccgtctgaaggggctgccggaggagaaggtgaaggctgagatggaacaa
attttgatggatgtcggactgcctcaccaacgacactcccgcaccagcacgctctccgga
gggatgcagaggaagctgtcagtggccctggcttttgttgggggttcaaaagtcgtgatc
ttggatgaacctactgctggggtcgatccctacgcacgcaggggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtccactcatcacatggacgaggctgac
atcctgggtgaccgcatcgccatcatctcccacggcaagctgtgctgcgtaggctcctcg
ctcttcctcaagacccacctgggcacaggctactacctgactctggtcaagagagactac
gacctgacgcttcagtcctgcaggaattctgccagcaccgtctcctacatcaagaaggcc
gagaaggatgacactgtatcagagagcagttcagatgctggtctgggcagcgaacccgag
agtgaaaccaccactattgatgtgtccctcatctccaacctgatattcaagcatgtgcac
gaggctcgcttggttgaggaccttggccacgaaatcacctatgtcttgccctacgagtca
gctaaagacggagcctttgtagagcttttccacgagctggatgaccgactgaccgacctg
ggaatatccagctatggaatatctgataccaccctggaggagattttcttgaaagtggct
gaggacagtggggtggatgctgttgagctttcagatggagttgtgcccaccaggactcgt
cgccatcacgcatttggagaccaccagagctgcctgaagcccttcactgaggacgacttt
gaatttaacgactctgaagaatcccgtgagaccgactggctcagtggatcagatggcaaa
ggctcttaccaggtcaaaggctggagtttaaagagacagcagtttgttgctctactctgg
aaacgattcctctacgctcggcgctccaggaaaggcttctttgctcagattgttctcccg
gcggtgtttgtgtgtattgccctggtgttcagtctgatcgtccctccgttcggaaagtac
ccaagtctggctctggattccagcatgtatggagaacagtttaccttcatcagtaatgac
ttacccgaggatcctcacgtcaacaaactactgggagctctgacagaaaagccagggttt
ggaacgcgctgcatggaaggacaacccataccggacaccccctgcacagcagttgagggt
gagtggtcggccccgccagtctctcaaagtgtgaaggacatgttcgacaatggcaactgg
tccatggaggatccgtctcccatgtgtgagtgcagctctggaggacgcaagaggatgctt
cctgagtgtcctgccggtgctgggggacttccaccgccagagatgaagatcagtgagaca
gacactcttcagaatttgactgacagaaacatctcagactatctggttaaaacctacgct
cagatcattggcaagagcctgaagaacaagatttgggtcaacgagttcagatacggtgga
ttctcgctgggcgccaggagttctccgcttacggcccacacagatgaagttgatgatgcg
atcgctcagctgacaagacgtttccgtctggagagaggaactgcagcggatcgtttcttt
aacagcctctccacttttatgcaaggattggacaccaagaataacgtcaagatctggttc
aacaacaagggctggcacagcatcggttctttcctcaacgtgatgaacaatggcatcctt
cgggcgagcctgccatccgataaagaccccacgaagtttggcatcactgcctccaatcac
ccgctcaacctcaccaaggagcagctgtcgcaagtcgcattgatgacgacatcagtagat
gtgctggtttccatctgcgtgatcttcgccatgtcctttgtccctgccagttttgtggtc
ttcctcatccaggagagagtgaacaaggccaagcacatgcagttcatcagtggagtgcag
cctctcctctattggctggccaactttgtgtgggatatgtgtaattacgtcgtcccagcc
acactggtcatcattatcttcatgtgtttccaacaagacgcctacgtctcctccaccaat
ctgcccgtgctggcgctgctgctgctgctctacggatggtcgatcacccccctgatgtat
ccggcctcgttcttctttaagatccccagcacggcctacgtggttctgaccagcgttaac
atactgataggaatcaacggcagcgtttccacttttgtactggagctgtttggaagcaat
gaaatcggtggcatcaacgacatcctgaagaacgtcttcctcatcttccctcacttctgt
ctgggcagaggactgattgacatggtgaagaatcaggcgatggccgatgctttggagaga
ttcggtgaaaaccggttccgctcccctctggcctgggacatggtgggaaagaacctgttt
gcaatggccatagagggcgtgatcttcttctgcatcaccgtcctcattcagtaccacttc
ttcttcaaagccaggtcttccaccagtcatctgaagcctattggagaagaagatgaggat
gtggccagagagcgacagaggatcctgagcggaggaggacagtcggacatcctggagctc
aaacaactcaccaagatttacaagaggaaacagaagccggcggtggatcggctgtgtgtt
ggcatcccccctggagagtgctttggattgctgggagtgaatggggcagggaaaacaagc
accttcaagatgctgacgggagactgtgtggtcaccagtggagaggcttacctggctggc
aagagtgtaaatacagagatagatgaggtgcatcagaacatgggatactgtcctcagttt
gatgccatcaacgaccttctgaccggcagagagcacctcgagttttacgccatcctgaga
ggagtgcctgagaaggaagtctgtgaggtggcagagtggggcatccggaagctgggcttg
gtcaaatatgtagacaagtcagcgggcagctacagtggaggaaacatgaggaaactgtct
actgccatcgctctcataggaggaccgcctgtagtctttctggacgaaccaacaacaggc
atggatcctaaagcacgtcgtgctctgtggaacgcaatcctgagcatcatcaaagagggc
cgatctgtagtcctgacctctcacagtatggaggagtgtgaagcactttgcaccagaatg
gccatcatggtcaacggcaggttccgctgtcttggcagcgtgcagcatctcaaaaacagg
tttggtgatggctacaccatcatcctgcgggtggccggcccagacccagaccttcggccg
gtgatggagttcatcgagcgggagttgcctggcagcacgctgaaggagcaacaccgcaac
atgctgcagtaccagctgccctcctccctcacctccctcgcccgcatcttctccctgctc
tctcagaacaaggagaccctcagcatagaggactactccgtctcacagacaactttagac
caagtgtttgtaaatttcgccaaggaccaaagtgacgaagaccatttgaaagaagcccat
ctgaacaaacgggacgctgtcgtagtggatgtttccaagctaaacactttcctcaaggac
aacacgaccagggagagctgtgtctga
DBGET
integrated database retrieval system
