Cottoperca gobio: 115014554
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Entry
115014554 CDS
T07513
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cgob
Cottoperca gobio
Pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115014554 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115014554 (rbm22)
Spliceosome [BR:
cgob03041
]
Complex B
Other components
Prp19-related factors
115014554 (rbm22)
Complex C
115014554 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
115014554
NCBI-ProteinID:
XP_029297377
Ensembl:
ENSCGOG00000007611
UniProt:
A0A6J2QJ68
LinkDB
All DBs
Position
10:13971259..13976477
Genome browser
AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEFGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANTDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSITTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGISEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPITSPAV
MNIALPPPPGINPPPPGFGPPMFHPMSHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRQGE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgctgggatcgaacacctacaatagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaacccttacatccgcatgaccaaggagaag
tatgggaaagaatgcaagatttgtgcccgaccatttaccgtgttccgatggtgtccaggg
acacgaatgcgttttaagaagacggaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcagacatgtctgctggacctggagtttggcttgcctattcaggtcagagacaccggc
ctgtcagttaaagatgaggttcctaagtcggatgtcaacaaagagtactacacacagaac
atggagagagagatagccaatactgatggcacacggccagtgggccagcttggtaaagca
cccagctctagtgatatgttgctgaaactggcccggaccacaccatactacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggggaggagtgtccc
tacaggcacgagaaacccacagatcctgatgatcctctagccgaccagaacataaaggac
cgttactacggcattaatgaccctgtcgctgacaagctgctgaaacgggcctcaactatg
ccccgactggacccaccagacgacaagtccatcaccaccctctacatcgggggtttgggg
gatactgtcactgatggagatctcaagagtcacttttaccagtttggtgagattcgcacc
attaccatagtccagaggcaacagtgtgccttcatccagtttgccactcggcagtcagcg
gaaatggctgcagagaagtccttcaacaaactcatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggctgcaagagggaaagagggcattaaagatggcatcagtgag
atgggcaccagacttgatcctgttcctggactgcctggagctctaccgccacctccagct
ttagatgaagaagctcctgcaaactactttaacctggaccctatcacctctcctgcggtc
atgaacattgctctgcccccacctccaggcatcaacccgcctcctccaggtttcggccct
ccaatgtttcaccccatgagtcacatggctccaccgatgccccctccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggtgcccatgctgca
cacggctctcgtcagggtgaatag
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