Cottoperca gobio: 115014566
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Entry
115014566 CDS
T07513
Symbol
col23a1
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cgob00536
]
115014566 (col23a1)
Glycosaminoglycan binding proteins [BR:
cgob00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115014566 (col23a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115014566
NCBI-ProteinID:
XP_029297398
UniProt:
A0A6J2QG50
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Position
10:14404041..14521394
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AA seq
625 aa
AA seq
DB search
MDTASDSIGENKPVYQCAPRSAVQRWLPGFPIALCLLMSMSSITVCLLMSLKTYQLENRL
QMEMDKASVFQPPHTACLNEDGTLIPELSNSVGRLVEEKVVVLMMPKLRIARDVGQECSC
PPGPPGKRGRMGRRGEPGLPGKAGRDGYPGPLGLDGKPGFPGPKGSPGPAGLKGEKGDQG
DAGPRMVFPRYDHGFLVGEQSSSFQRRFLKGDQGQAGAAGPPGPPGPPGPRGPPGNTGKD
GPRGPAGESGFPGRDGIDGPQGLPGKPGENGEPGYSGQQGPPGAKGEAGVGEKGERGMDG
LSGFKGDKGEIGEQGPQGSMGYTGEKGTTGSSDIIDFNGKLLDAFQAINTISVSGPPGPP
GPPGPSGGKGELGLPGPAGVDGQKGPKGDLGETGPVGHRGEMGEMGLSGPAGMDGHKGEK
GDCRMDDNLVQMISQPGPPGPPGIPGSPGSMGLHGMPGPKGEPGFGMKGERGDSGAPGLR
GLDGTQGLTGSSGLVGLPGAKGEKGRPGEPGLDGFPGLMGGKGDRGERGDKGDRGSVGKR
GLKGQKGEQGPPGLDQPCPVGCGETKGVSEEAGLSPPPPPPLPPSGPEAPCPVGQDGMPI
PGCWHKGHFEEMAKQKLKRKRLSQP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggatacagccagcgactccatcggggaaaataagccggtgtatcagtgtgcgcccagg
tctgcggtccagcggtggcttccaggttttcccatcgctctgtgcttgctgatgtccatg
agctccatcactgtgtgtcttctgatgagcctcaagacctaccagctggagaaccgactt
cagatggagatggacaaagcgtccgtcttccagccgccgcacacggcttgtctaaacgag
gatgggacccttattccagagctgagcaattcagtggggaggctcgtagaagagaaagtg
gtggtgctgatgatgccaaaattgcggatcgctagggatgttggccaagagtgttcctgt
cctccagggcctccaggaaagcgtggaaggatgggaagaagaggggaacctggcctgcct
ggcaaggctggacgggatggatacccgggtcctcttggcttggatgggaaaccaggtttt
ccaggtcccaagggaagcccgggaccagccggactcaagggagaaaagggtgaccaagga
gacgctgggccaaggatggtcttccccagatatgaccatggctttctcgttggagagcaa
tccagtagctttcagagacgctttctgaagggtgaccaaggccaggctggagccgctggt
cctcctggtccgccgggtccccccggtccccgaggcccccctgggaacacaggcaaggac
gggccacgtggccctgctggcgagtcgggttttccaggtcgggatggcattgacgggcca
caaggattgcctgggaagccgggagaaaatggtgagccaggctattcagggcaacagggt
cctccaggagcgaagggtgaggcaggtgtgggagaaaaaggagagagaggcatggatgga
ctctcaggatttaagggagacaaaggggaaataggagagcaaggaccacagggatccatg
ggttatactggcgaaaaaggcaccacaggctcctcagacatcatcgacttcaatgggaaa
cttctagatgctttccaggccatcaacaccatcagtgtttcgggcccacctggaccacct
ggacccccaggcccttccgggggaaagggtgaacttggtttacctgggccggcaggagtt
gatggacagaagggacctaaaggtgacttgggtgagacgggaccagttggccacagagga
gagatgggagagatggggctctctgggcctgctggtatggacggacacaaaggagagaaa
ggcgactgcaggatggatgacaacctggttcaaatgatttcccaaccaggcccccctggc
ccaccagggattcccgggtcccctggatccatggggctgcatggtatgcctggtcctaag
ggtgagcctggattcgggatgaagggagagaggggggactctggtgctcctggactcaga
ggattagacggtacccagggccttactgggtcttcaggattagtgggtcttccaggtgca
aagggagaaaaaggcagaccaggagaacctggactagatggtttcccgggtctgatggga
ggcaaaggtgatcgaggggaaagaggagacaagggtgacaggggatcagtgggaaagaga
ggcctaaagggccagaagggagagcagggtcctccaggcctggaccagccttgtcctgtg
ggttgtggtgagactaaaggtgtgtctgaggaggctgggctttctccccctccacctcct
cctcttcctccttccggccctgaggccccctgtcctgtgggacaggatgggatgcccata
ccaggctgctggcacaaggggcattttgaggaaatggcgaaacagaagctcaaacgcaag
cgtctctctcagccctga
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