Cottoperca gobio: 115014590
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Entry
115014590 CDS
T07513
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115014590
Enzymes [BR:
cgob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115014590
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115014590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
115014590
NCBI-ProteinID:
XP_029297440
Ensembl:
ENSCGOG00000004263
UniProt:
A0A6J2QJ25
LinkDB
All DBs
Position
10:complement(11571395..11584290)
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AA seq
638 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFGMNGNVGSNGIGNAVGNGSMMNASGGGVSYPQQSNPGWAPHHG
GRSYPESQQQHAQGSYLSAGVQRHSSHGAHRHPGAGGVLHFHPDNVCSEDRDKMEDSPSP
KRQRLSQQTMLDLNSAPPSTPSSPIRPWELPPSRRPHPHYMPERCHTPVRNRRSPPMRRQ
RGRRDRLTRHHHHAHNNHHHYNSNNNNNHHHHHHHPNAHHHHHHHHHHLLSHHGPSPGHQ
DENYRHPAPPQGYPPYSQQSPRGLGPGLDERPVHHPPNPSPRPLHQSPNLSPRMLHPAAH
PQHPHPSQQSSLVLDLHEQGSVPVSYPVSPPGVPPGLPPRSAPQQIPACSVVFSGQHYPV
CSVPPVLQTCSVQHLPMPYPFPSLLSSDPAFLLPPPHLTHPQAHLSHHPPHLPQPGQFGP
YPTQQARSPLQRIENDVELLGEHLSLGAGLHYPPATHPALTPHSTQLHFLSHDPLPQEFF
GVSYPNFIPRRLPGRRYRSQQPLPPSPYHPSLLPYFLSMLPVQPTGPAISLELDVDDGEV
ENYEALLNLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLR
VLPCSHEFHGKCVDKWLRANRTCPICRADASEVQRDSE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccgaggactcggtcgcggtctcggtctggcttctatcatttcggcatgaac
ggcaacgttggcagcaatggcattggtaacgcagttggtaacgggagcatgatgaacgcc
agcggaggaggggtgagctacccgcagcagagcaaccccggctgggcgccgcaccacgga
ggtcgtagctacccggagagccagcagcagcacgcccaggggagctacctgtccgcgggg
gtgcagcgccactcttcgcacggagcccacagacaccccggagccggaggagtgcttcat
tttcatccagataatgtatgcagcgaggatcgggacaaaatggaagacagcccaagcccc
aaaaggcagcgtctttcccagcagaccatgttggatctaaactccgcccctccctctact
ccttcctctcccattcgtccctgggagctgcctcccagtcgcagaccacacccccactac
atgccagagagatgccacacgcctgtccgcaaccgacgcagccctccaatgagacgccag
cgtggccggagagaccgtctgacccgccatcaccaccacgcccacaacaaccaccaccac
tacaacagcaacaacaacaacaaccaccaccaccaccatcaccacccaaacgcccaccat
caccaccaccaccaccaccaccacctgctctcccaccacggcccgtcgccaggccaccag
gatgagaactaccgtcacccggctccccctcagggctacccaccctacagccagcaatct
ccccgagggctggggcccgggcttgatgagcgcccagttcaccatcccccaaatccctcc
ccgaggcctctccaccagtcaccgaacctgtctcccaggatgctgcatcctgcggcccat
ccacagcacccacacccatcccagcagagcagtttggtgctggacctccatgagcagggt
tcagttccagtgtcgtatccagtgtctcctccgggagtgccaccaggcctgccgcctcgc
tccgcccctcagcagatcccagcatgctcggtagtattcagtggacagcactatcctgtc
tgcagtgtccctcctgtccttcagacttgttctgtgcagcacttacccatgccctacccg
ttcccatcactgctgtccagtgacccggccttcctacttccccctcctcacctcacccat
ccccaagcacacctttcccaccaccctcctcacctgccccagcccggacagttcggaccc
tatccgacgcagcaggcccgatcaccgttacagaggatagagaatgacgtagaactgctt
ggagaacatctgtctttgggtgctgggctccactatccccctgccacccaccctgccctc
acaccgcactccacccagcttcacttcctctcccatgatcccctgccacaggagttcttc
ggagtgtcctatccaaactttattcctcgacgtctcccggggcgacggtaccgttcgcaa
cagccactgccaccttcgccttaccaccccagcctcctgccttacttcctttcaatgctg
ccagtccagcccacaggtcctgcgatcagtctagagctggatgtagacgatggagaagtg
gaaaattatgaggctctcctgaacctcgctgagcgtctgggagaagccaaactccgagga
ctgaccaagggagacattgaacagcttccttcttatcggttcaatccaaataaccatcag
tctgaacaaacactgtgtgtggtgtgtatgagtgattttgagtcccgccaactgctgcgg
gtcctgccctgcagccatgaattccacgggaagtgtgttgacaagtggctgagggccaac
aggacgtgtcccatttgtcgtgccgacgcctcagaggtccagagagactcggagtga
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