Cottoperca gobio: 115014598
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Entry
115014598 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115014598
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115014598
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115014598
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115014598
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Protocadherins
115014598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115014598
NCBI-ProteinID:
XP_029297448
UniProt:
A0A6J2QGA0
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Position
10:complement(15809471..15812735)
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AA seq
882 aa
AA seq
DB search
MQYAFGCAGLSCCLCPHSPLAAEELVACVRAMGYWTPHNMNWAGLLQNLLIVIHLQQSIC
GSVRFSVPEEQGPGVLAGSLSEHFSPPYQLLTQKYLWMDNNTGNFYTTDQKMDREALCRE
ETKDEECIILHNAVVGPSGDLIQFPVIIEDINDNAPHFESSEIHLKISEDVTVGISFLLD
DNAQDRDARYNGKLQYQLKDFDGVFSLNVEENSSVIMLVVQTALDRETRDLYQMVLVATD
CGSGPLSATATLIVTVTDVNDNCPSFSSDSVRSVTIPGDSPKNMLVVQVRATDPDSGLNA
AIIYSLSPKVSERAKKLFSLDSLTGSITLTQDLQSDNSEELLLKVLARGHHCPPADTQVT
VSVLPKVNQELAIKIGFIAEHQNQTMVLPENQPPTVLAVLELEGDSGFKGSSLAIENEVP
FTLSPQNGKYLLSTSKPLDYELKSEHHISVVVHGRSAEGSVISPSGRVIRVLVADVNDNA
PHFLQSHYQLEVEENNQPGMSLLQLSASDADSGYNGRVTYRLDKHTSTIFHIDPVTGQLS
VSAVLDREQQGVHELSVFAQDSGSPPLESVATVSICVLDQNDNAPVFVTPHFIFFIPENI
PPFAQVGRVGVTDLDKVKNGYLELHVVSSSGPFVLDNTLETLRTTTNMDREKDDRYELYL
LASDHGHPVALTSTARVTIFVEDINDNQPKVIFPSSNSSCQTVSPATITGTIVTKILAVD
EDSGLNSEITYTVVAPDPGQNSSPFRVDSRSGNITVAQQLLRKDLGMHHLFIVVRDGGKP
ALYTTVWVNLLVNESMGPCYLERAPTWSRTSDPSKAPICEAEDTRSAQLTLLVGLGMMLV
STCWLVATAVLYLKQKRASLQQNKRGHIEENEIPLRLKDKYY
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgccttcggctgtgcaggtttaagttgctgcctctgtcctcatagtccactc
gctgctgaggagctggtagcatgcgtgagggcgatggggtattggactcctcataatatg
aactgggctggactactacagaatctgctgattgtgatccatctgcagcagagcatatgt
ggttctgtccggttttctgtcccagaggaacaggggcctggtgtcctagcagggtcacta
agtgaacacttttcacctccgtaccagctcctgacccagaagtatctgtggatggacaac
aacacagggaatttctacaccactgatcaaaagatggatcgcgaggctctctgccgcgag
gagacaaaagacgaggaatgcatcattttacacaatgctgtcgtgggtccctcgggagac
cttatacagttccctgtgatcatagaggacatcaatgacaatgcgcctcattttgaaagc
agtgaaatacacctgaagatatccgaggatgtgactgtggggatcagtttcttattggat
gacaatgctcaagacagggatgccagatataacggcaagctgcaataccagctaaaagat
tttgatggagttttcagtttaaacgtggaagaaaacagctctgtcatcatgctggttgtg
caaacagctctggatagggagactcgggacctgtatcagatggtgctggtggccaccgac
tgtggctcaggccctttaagtgctacagcaactttaatagtcacagtgacagatgttaat
gacaactgtccaagctttagctccgacagcgtccgcagcgtcaccatccccggagactcc
ccgaagaacatgctggttgttcaggtcagagccacagacccagattcaggcctaaatgct
gccatcatatactccctgagtcccaaagtctcagagcgggccaagaagctctttagcctc
gacagcctcactgggtccatcacactaacacaggacctccagagtgacaactccgaggaa
ctgctgttgaaagtcttagctaggggccatcactgccccccagcagacactcaggtaacc
gtatctgtgctccccaaggtgaaccaagagctggcgatcaagatcgggttcatagcggag
catcaaaaccagactatggtgttaccagagaaccagccccccaccgtcttagctgtttta
gagcttgagggtgacagcggctttaaaggctcatctcttgccattgaaaatgaggtgcct
tttactttgagcccacaaaatggcaaatatctgctttctacatcaaagcctctagactat
gagctgaaaagtgaacatcatatttctgtggtagtgcatgggagatcagctgaaggatct
gtgatctctccttccgggcgtgtgatcagggtgttggtggcagatgtcaatgataatgct
ccacatttcctccagtctcactaccagctggaggtggaggaaaacaaccagccggggatg
tcactgctgcagctctcggcatcagacgcagacagtggatacaacggcagggtgacctat
aggctggacaaacacacatctaccatctttcacattgaccctgtgacaggtcaactgtct
gtgtcagccgttctggatagggaacagcagggtgtacatgaactctccgtgtttgcacaa
gatagcggctctcctcccttggagtcagtggccacagtatccatttgtgttctggaccag
aatgacaatgcacctgttttcgtaacacctcacttcatctttttcatcccagagaacata
ccgccattcgcccaggtggggagggttggggtgacagacctagacaaagtaaagaatggg
taccttgagttgcatgttgtaagcagcagtggaccatttgttttggataacaccctggag
acactgcgcaccaccaccaacatggaccgcgagaaggacgaccgctatgaactctacctg
ctggccagcgatcatgggcacccggtcgctttgacttccactgccagggtaactatcttt
gtggaggatatcaatgacaaccagccaaaagtgatctttcccagcagcaactcctcttgt
cagactgtctctccagcaaccattacaggcaccattgtaacaaagatccttgctgtcgac
gaggactcagggctgaattcggagattacttacactgttgtggcgccagacccaggacaa
aacagcagccccttccgggtggattcaaggtcggggaacatcaccgtagctcagcaactt
ctacgcaaagacctgggaatgcatcacctcttcattgtggtcagagatggggggaaacca
gcactttataccactgtctgggttaatctgttggtcaatgagagcatggggccctgctat
ttggagagggcgcctacctggtcaaggacatctgacccctcaaaggcccccatctgtgag
gcagaggacaccagatctgctcagctgacactgctagtaggccttggtatgatgctggtg
tccacatgttggcttgtggcgacggctgttttatacctgaagcaaaagagagcaagtcta
caacagaacaagagggggcacattgaggagaatgagattccactcaggctcaaagacaaa
tattactga
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