Cottoperca gobio: 115014861
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Entry
115014861 CDS
T07513
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115014861
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgob01009
]
115014861
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgob04515
]
115014861
Protein phosphatases and associated proteins [BR:
cgob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115014861
Cell adhesion molecules [BR:
cgob04515
]
Cadherins
Protocadherins
115014861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
115014861
NCBI-ProteinID:
XP_029297823
Ensembl:
ENSCGOG00000009822
UniProt:
A0A6J2QHD7
LinkDB
All DBs
Position
10:complement(421902..589272)
Genome browser
AA seq
1211 aa
AA seq
DB search
MAALRWEVLLFLTVVLLVSCAASPTDILYRVPEEQPPNTLIGSLAADQGLPDTGHLYKLE
VGSPYLRVDGKTGDIYTTEIPIDRETLRDCRNLFEGDKCFLEFEVSITDMVKGIGTGPRL
IEGRIEVVDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGSNGVAEYSLSTGP
DADQLFTLQVAVDSDEKLPQLVVMGNLDREKKDSYDLNIRVMDGGKPPRASSALLRVTIT
DQNDNSPKFERNQYNTELLENSPQGHSVLQVRANDADTGTNGEIDYSIHQATESVQRLLR
IDRSTGIIYVKGLVDREDESLLKFFVFAKDRGPYSKSSKAQVTIIIKDQNDNAPAIEIRG
IGLVTHYNGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESAND
RKRKYFLQTTTLLDFENLRDYRIEIVAVDSGNPALSSTNSLKVQVTDINDNSPSFSPSLL
EVDFSEGNQPGDKVLDVMATDADSGTNAELSYSIIENPATRLFEIESNTGEIRVKNLLDR
EETERYEFRVAAADKGIPSKTGTATVVVNVLDRNDNDPKFMLSGYSFSVIENMAPLNPVG
VVTVTDADKGENARVKLFVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLKAVDAGV
PPRSSYVGVTINVLDENDNAPYVTKPANSSYKYMSPVTPPDTSVEVVEAEDIDSGLNAEL
VYAITGGNPYGLFHISPNSGEITLVQEFTGKHNGLHRLVVKVSDKGKPPRHTSALVHVFV
NDTKSNVSLIEALVGYSLSTPLDKDIAGDPNYAHAQRSNILYGSLAGIAGVILVIVAVVV
IRHRLQQDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKPLEEDEEASLQK
GLNFNLINDNVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIMLQPQSPSASKKHQAVQ
DLPATNTFVGTGDNTSTGSDQYSDYSYKANPPKYSSKQSQPPHRRVTFSTSNQAQDQQDP
SQHSYYDSGLEESETPSSKSSLGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPD
VAMTGNCTHECTEFGHSDSCWMPGESSPTRMVSKNAAKLSTFVPYQEMDGQEQLMANGSP
KPLTEERGTGSGSGSKVANMRFMTPYSSAYHGGGNSSGKDCGLEEIPLSQAVEYHSATTP
TGQTSKREIYL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgaggtgggaggttctgctgttcctgacggtcgtcctgctggtctcctgc
gccgcctcgcccaccgacatcctgtatcgggttcccgaggagcagcctcccaacacgctg
attggtagcctggcggcggaccagggcctgcctgacaccggacacctctacaagctggag
gtgggctcgccgtaccttcgggtggacggcaagaccggcgacatctacaccaccgagatc
cccatcgaccgtgagacgctgagggactgccgcaacctgtttgagggcgacaaatgcttc
ctggagtttgaggtgtcgatcaccgacatggtgaaaggcatcggcacggggccgcggctg
atcgagggccgcatcgaggtggtggacatcaacgacaacacgccgcagttctcctcgccc
atcctcaccctgtccatcccagagaacacgcacatcggtgccctcttctccatccccatg
gccaccgacagggactccggcagcaacggggtggccgagtactcgctgagcaccgggccc
gatgccgaccagctcttcaccctgcaggtcgccgtggactcggacgagaagctgcctcag
ctggtagtcatgggtaacctggaccgcgagaagaaagactcgtacgacctgaacatccgg
gtgatggatggcgggaagccgccaagggcgagcagcgccctgctgcgggtcaccatcacc
gaccagaacgacaactcacccaagtttgagaggaatcagtacaataccgaactgctggag
aacagcccacagggacactctgtgctgcaggtcagagccaatgacgcagataccggcacc
aatggagagatcgactacagcatccatcaggcgacggagtctgtccagaggcttctgcgc
attgaccgctctacaggcatcatctacgtcaagggcctggtggaccgtgaggatgaaagc
cttctcaaattctttgtgtttgccaaagatcgtgggccctactccaagagctctaaggcc
caggtaaccatcatcatcaaggaccagaatgacaacgcaccggccatcgagatccgtggt
attggcttggtgacacactacaatggtgtggccaacatctctgaggacatgcccattggc
actccagtggcgttggtccaggtgtcggatcgtgacgagggggaaaatgcggtggtaacg
tgcgtggttgcaggtgacgtcccatttcagctccgacctgcaagtgagtcagccaacgat
cggaagaggaaatatttccttcagacaactaccttgctggattttgagaatttgagggat
tacagaattgaaattgttgctgtggattctgggaacccagccctgtccagcaccaactca
ctcaaagtgcaggtcacagacataaacgacaactcaccaagcttttccccttcgctgctg
gaggtggacttttcagagggcaaccagccaggtgacaaggtgcttgatgtcatggcgaca
gatgcagacagtggcaccaacgcagaactgtcctacagcatcatcgagaacccggccacc
aggctttttgaaattgaatccaacactggagagatccgtgtgaagaatctgctggatcgg
gaagaaacggagcgttatgagttccgtgtggctgcagcagacaagggcattcctagcaaa
actggcactgctactgtggtggttaatgttctggaccgcaatgacaatgaccccaagttt
atgctgagtggctacagcttctctgtcatcgagaacatggctcctctgaatcctgttggt
gtagtgactgtcactgatgccgataagggtgagaacgccagagtaaagctatttgtagaa
cctgacaatggcaaatttgtcatccagaacggcacgggaaccatcctgtccagcatctcc
ttcgaccgtgagaaggaaagcacctataccttccgcctaaaggctgtggatgctggtgtc
ccacctcgatcctcatatgtgggggtgactatcaatgtcctggacgagaatgacaatgcc
ccctacgttaccaaaccggctaactcttcctacaaatacatgtcgcccgtcaccccgccg
gacaccagtgtggaggtggtagaggctgaggacattgactctggactcaatgctgagctg
gtctatgccatcacaggtggaaatccgtatggcctgttccacatctcgcccaacagcggg
gaaatcacactggtgcaggagttcaccggcaagcacaatggactgcaccgcctggtggtg
aaggttagcgataaaggcaaacctccccgccacaccagtgccctagtccacgtttttgtc
aatgacaccaagtccaatgtctccctcattgaagcactggttggatacagcctctccacc
cctctggacaaggatattgccggagatcccaactacgcacatgctcagcgcagcaacatc
ctatatggcagccttgcgggtattgctggtgtgattctggtcattgtagcggtggtggtc
atcagacacagactgcagcaggacaccaaaagcggctaccaggccggcaagaaggagagt
aaggacctgtacgctcccaagcagggccccaaaaatggcaaggggaaaaagagcaaaaaa
ggaaaagctcctaaaccggccaagccactggaggaggacgaggaggccagcctgcaaaaa
ggccttaatttcaacctcatcaacgacaacgtcaacgacagtcccagaatccacctgccc
cttaactacccaccgggaagccccgacttgggccgccactaccgctccaactcccccctt
ccctccatcatgctgcagccacagtcgccctctgcctccaagaagcaccaggccgttcag
gacctccccgccaccaacacctttgtgggaacaggcgacaacacctccacaggctccgac
caatattcggattacagctacaaggccaacccgcccaaatacagcagcaaacagtcacag
cctccccaccgccgagtgaccttctccacatccaatcaggcgcaggaccagcaggacccg
tcccagcacagctactacgacagcggcctggaggagtcggagacgcccagctccaagtcg
tcgttggggccgcggatcggccccctggcgctgccagaggaccactacgagcggaccaca
cctgacggcagcatcggcgagatggagcacccggagaacgatctcaggcctcttcccgac
gtggcaatgaccggtaactgcacgcatgagtgcaccgagtttggccactctgactcctgc
tggatgcccggcgagtcttcccccacccggatggtatccaagaacgccgccaagctttcc
accttcgtgccttaccaggagatggacgggcaggagcagctgatggccaacggcagcccc
aagcccctgacggaggagcgcgggacgggcagtggcagtggctccaaagtggccaacatg
cggttcatgacgccctacagcagtgcctaccacgggggtggaaactcctctggtaaagac
tgtgggctggaggagatcccactgagccaggcggtggagtatcactcagccactactccg
accggccagacctccaagagggagatctacctgtga
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integrated database retrieval system