Cottoperca gobio: 115014935
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Entry
115014935 CDS
T07513
Symbol
limch1
Name
(RefSeq) LOW QUALITY PROTEIN: LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
115014935 (limch1)
Domain-containing proteins not elsewhere classified [BR:
cgob04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
115014935 (limch1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
115014935
NCBI-ProteinID:
XP_029297948
Ensembl:
ENSCGOG00000011277
UniProt:
A0A6J2QHR0
LinkDB
All DBs
Position
10:3311763..3394048
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AA seq
1235 aa
AA seq
DB search
MASPVTDIGQSHQHHPVTESAADSAFQEAQTWIEAVTGRCFGDKDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGTD
CSRKLKNVLITIYWLGRATNGCTSYNGPTLDLKEFEGLLSQMRKEAEEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVPRGSSDGRGSDSESDG
PPHRKMPDVRKDDMSARRTSVSEPRTAMPFNQYLPNKSNQTGYVPTPLRKKKNDKEEGAR
KSWSTATSPIGGDRPFSTPARSCSEELFHHSTTLAANDAASPVITSGKPPPVMEQEEEAA
AAARKGAAGVPLVADAEQDEKRAHRTLTSPKHVTTPSPPHFLPVPAAMATATTATTDTGR
RKGRALSESGDPQGANSWLDSSLPATFSRTYSVSDDPQSVSMIDMRGEEEAMLQPHSQVR
HELMHNQYNRMKEEDDHWQDDLARWKHRRRSISQDLIKKEEERKMMEQLMSGDICPTHRR
RSIKTYREIVEDKERRELELRDAYKSARNQEEASVILQHYAQRFSISDSVLERLQLPKIL
DRSISADPSSPCSPFPLSLSLCASPTTPDPFDIDPNGPLRYLRQQSAPPPKFTSTLEARV
EEFPKDSSHQRPQIRSRSSEPPSNRNLSPKPVPLLTPKPYFQSRPAAADQWPSKADGLLR
VNGDIGSDDVPTAPESRGRESPQFHASSSITSNSTVDVPSSAASPTHSPHTSTGGGSPVS
TKAKEAQRGTEPASKDIQEEKVIEHSTPPSRPTSLPSELQKPEESFGKSVAAPEEDKSNA
AAQQTPPAEAKQKQQKAEPSGQNISSLVQSGVGTPRSQPIPSQAIVPSSQESSQRRENVP
SLAAPGSFEYHPPRETTAEFANSVRSPLATSNPKLRWEFFVPPEEMEKDRRGNEKYRREQ
EKLKEEWEKAQREVAEEGRKYHEEERRILEETVAPLTPRSSALPSPSRGEISSTSEPQDT
IVRSLADWERKQELLESQSRGSTESVEWKRRENDRTSDISTADDSMKTGRSLVSQSSSQA
ETLGHSLQNGQKLPAMPTKTSTPVKKPEEPSADGNKPGRPAGDRRSAPIDNIMCCSSSKP
PAACPPPPDTQPPAPNRSVSGKKLCSSCGQPLGKGAAMIIETLSLYFHIQCFKCGVCKGQ
LGDTTTGTDVRIRNGLLNCHQCYVRSRSAGQPTTL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggtcacagacatcggacagtctcatcagcatcaccctgtgactgaatcg
gccgcagactccgcgtttcaggaggcgcagacatggatagaggctgtgacgggaagatgc
tttggtgacaaggacttcagaggaggtttggagaacgggatactgctatgcgagttgctg
agctctattaaacccggcctggtgaagaaaattaacagacttccaacacccatagctggc
ctggacaacctcagtgtgtttctgcgcggctgtgaagagttgggactgaagggctcccag
ctgtttgaccctggagacctgcaggacacatcaacacgccccactgcaaagggaacggac
tgcagccgtaaactcaagaatgttctaatcaccatctactggttgggtcgtgctaccaac
ggctgtacgtcctacaacggtcccacgctggacctgaaagagtttgagggcctgctgtca
cagatgcgaaaggaggcggaggaggcagagagccctaaacgcagcatccgggacagtggc
tacatcgactgctgggactccgagcgcagcgactctctctccccgccacgccacggccgt
gaggactccttcgacagtctggactccttcggctcacgctcacgacagaccccgtcgccg
gacgtcctggtcccccgcggcagcagcgatggccgcggcagtgactcggagtccgacggt
cccccccacaggaagatgccagacgtccgtaaggatgacatgtcggcacggcgaacgtcc
gtcagcgagccccgaaccgccatgcccttcaaccagtacctgcccaacaagagcaaccag
actggatatgtgcccacgccactccgcaagaaaaagaacgataaagaggagggcgcacgc
aagagttggagtactgctacttcacctatagggggagacagacccttcagtactccagct
cgctcgtgctcagaggaactcttccaccactcgacaactctagcggcaaacgatgcggcg
agccccgtcatcacctccgggaaacctccacctgtgatggagcaggaggaggaggcggct
gctgctgcgaggaagggagccgccggtgtcccgttagtcgcagatgcagagcaagatgag
aagcgggctcaccgaacgctgacctctcccaaacacgtcaccaccccgagtcccccccac
ttccttcctgtgcccgctgccatggcaaccgctacaacagcaacgaccgatacaggccga
cggaagggacgggctctgagtgaaagtggtgacccacaaggagcgaactcttggttggac
agcagtcttccagcaacattcagccgcacatatagtgtgtcagatgacccacagagtgtg
agtatgatcgacatgcgtggtgaggaggaggccatgctgcagccccacagtcaggtgcgt
catgagctgatgcacaaccagtacaacaggatgaaggaagaggacgatcactggcaggat
gacctggcccgatggaaacatcgcaggaggagtatttcccaggacctgatcaagaaggag
gaggagaggaagatgatggagcagttgatgtcaggagacatctgtcccacccacaggagg
agaagcatcaagacctacagagagatagtggaggacaaggagcgtcgagagcttgagctg
cgggacgcctacaagagtgccagaaaccaagaagaggcgtcggtcatcctccaacattac
gcccagcgcttctccatcagcgactcggtcctggaacgcctgcagttgccaaagatcctg
gaccgcagcatatctgctgatccctcttcaccctgctcacccttccctctctccctctcc
ctctgcgcctccccaacgaccccagaccccttcgacattgaccccaacgggcccctgagg
tatctgcggcagcagtccgccccgcctccgaagttcacgtctacactggaggcgcgagtc
gaggagtttcccaaagactcctcacaccagcggcctcagattcgctctcgctcgtctgag
ccgccatccaaccgaaacctgtcgcccaaaccggtgcctttgctgacacccaagccttac
ttccagtcccgacccgcagcagcggatcaatggcccagcaaggcggacggtttgctccga
gtcaacggtgacataggaagtgacgacgttcccaccgcgcctgagagtcgaggaagggaa
tctcctcaattccatgcgtcctcttccataaccagcaacagcactgtagatgttccctcg
tcagcagcctcaccaacacacagtccacacacctcaaccggaggaggaagccctgtgtca
actaaggccaaggaggcacaacgtgggacagaaccagcctctaaggacatccaggaagag
aaagtcattgagcattcgaccccacccagccggcccacctcgctcccatcggagctgcag
aagccagaagaaagctttgggaagtcggtagctgctccagaggaggacaagtcaaatgct
gcagctcaacaaacgcctcctgcagaagccaaacaaaaacaacaaaaagctgaaccatct
ggtcaaaacatctccagtcttgtccagtcaggagtcggcacaccgcgaagtcagccaata
ccttcacaggccattgttcccagttcccaggagtcgtcccagagaagagagaacgtccca
agcttagctgcaccaggatcatttgaatatcaccctccgagggaaacgacagcagagttt
gcaaacagtgtcaggtctccgctggcaaccagcaaccctaagttacgctgggagttcttc
gttccgccagaagagatggagaaggatcgacgtggaaacgagaagtaccggcgcgagcag
gagaagctgaaggaggagtgggagaaagcacagagggaggtggcagaggaggggaggaag
taccacgaggaggagcgtaggatactggaggaaaccgtggcgcctctgactccccgctcc
tcggccctgccctcccccagccgaggggagatctcctccacctcggagcctcaggacacc
atcgtccgctcgctggccgactgggagcgcaagcaggaacttctggagagccagtcgagg
gggagcacagagagtgtcgaatggaaacgcagagaaaacgacagaaccagtgacatcagc
accgctgacgacagcatgaaaacaggcagaagcttggtgagtcagagcagcagtcaggcg
gagacgctcggtcacagtctgcagaacggccagaaacttcctgctatgccgaccaaaacc
tcgactccagtgaagaaaccagaagagccttcagcagacgggaacaagcccggccggcct
gcaggagacaggaggagtgctcccattgataatatcatgtgctgcagctcatcaaaaccc
cccgcagcatgtccaccacctccagacacacagcctccagcacccaacaggtctgtcagc
gggaagaagctgtgctccagctgtgggcagccgttagggaagggggcggccatgatcata
gagacgctcagtctttacttccacattcaatgctttaagtgcggcgtgtgtaagggacag
ttaggcgacacgactacgggcacggacgtgcggatcagaaacggcctcctcaactgtcac
cagtgctacgtccgctcccgctcggccggacagccaaccacgttgtga
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