Cottoperca gobio: 115015121
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Entry
115015121 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cgob
Cottoperca gobio
Pathway
cgob04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115015121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgob04131
]
115015121
Membrane trafficking [BR:
cgob04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
115015121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
PCSK9_C2
Motif
Other DBs
NCBI-GeneID:
115015121
NCBI-ProteinID:
XP_029298178
UniProt:
A0A6J2QIF1
LinkDB
All DBs
Position
10:6685983..6698993
Genome browser
AA seq
1454 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIFQVGKEKYNTGLVEKAEV
PEWNEECCFELLPGILEDCGRSAYPPGSGDLVLTVMHRVLIGLDVFLGQAIIPLDKIFQE
GICPRDEWFKLNSRAGRKEKERGELQVTVQFTRNNMTASMFDLTIKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRFAALSGSLGQPFGDEMGGGESPDVEIAEEKRSKMKDFFKGRL
RKSSDTRSCSSLASESSVSSMVSDNPGPPPSLDLMSDPPSSPIYTSKVRVDTHYGETALA
KQVLTSQHTTKVLTHKRAFSDEASKITTAFPRSNLAVESLKGQTMTQSKSSLCINGSHVY
DSEPSTPKSSGAHQSKLVLLEKCSPLSRSLQNLTKRSEDKGSFADGRRWSFDKIKKEDKE
DEKEAQASSLQIQQAQMGGRAAQADMPAVSSTVVSPDKGRKLRKTLFSGGRSDSLPAKSD
LNQAGSTSEGRLRGWFGSGDSQTKPRLEVSPKVESSSDVPPPLPPRSPVPPQCSSPSASP
SDHVSPDDCNHTNPFTPSSSPSSTPISPSNPFPSRMQRNPFFEDLIAEESQRSPTFAPGS
SSSSSPFHYTTLPSQTCTPSPACEAKATNMAYIKRERPRPVARQISLPALLPKSATPNSS
APRSMSESAGEMDDSFDAFASSRLYSPKGNLPQKQLRTSPTPSHRHSYLPVNNNTNNHAQ
ELQTCEEKPPPLPPRRPLRTSVNEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQRGREA
EGKRNSVSPDPHTSSETSDSLSVNSQTYANVSPSGFTSEEKLKKFKYEPLEDETDRWGGM
LFEQDLYGRRMCRGNYGQPNVNRLSLNAEETPGNKMTSVNSGPKILLDSDISVTDLLDMS
STSSQPVAKVQDITTAPAEESNPAETTCINNNVSSSLTLGDMNMNVNNSDFGFIDSDGSS
QSEVVDTLKGIKSFGGTFPQPPEASQIAAYHIETVTIAEDLFTLKDTYIPEMNSSFEITA
SSSKLYKVSSVCQDNCYDLNNMASHDNSRVNSRDIAALSLQNQAPNADGFKTESREVTSR
SLADFKKTKKEFDDNGNPQAKTGALNPKEPFPGVVSARFRPKGLSRQNSCGSPSNQSKSG
DREFEQFLSLVQNISQVSEGPLSYQPSKSALSSLMALVDQNESNTTSQLCSKDDTTVTGK
SSDISFEDLHAKVAPNSRTPSKSKIGQSLQEPSCPSXVPRTLSLSADAQATLHPTPVCCP
SIHPSSMGLDAGANTTLAVAPYTSSSSYSSTTSTTDQPLVDARHSLLPEETQPASNLPHQ
ESRTHPVKPLTSSQSEKKEGRSVLEKLKSTIHPGRMAHHAAAEPERTQEVTVDNSAHYQH
LTNMELISLLLQQEMDMQKQDTTSERQAAQLHKCEAELKKVKLQVRDLEDYIDNLLLRII
EQTPTLLQVRTRHK
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgttgatagatttggatgatgatcagcgatgggtgcccactcatgtcaatgtc
accgtcctccgggctagaggattgcgaaccaagggcaagcacggcagccgctacctctac
accatcttccaggtggggaaggagaagtacaacaccggtctggtggagaaggcggaggtg
cccgagtggaacgaggagtgctgcttcgagctgctccccgggatcctggaggactgtggc
cggagcgcctaccccccggggagcggtgacctggtgctcaccgtcatgcaccgcgtgctc
atcggactcgacgtgtttctcggtcaagccatcattcctcttgataaaatattccaggag
ggaatatgtcctcgagatgaatggttcaagctcaactctcgggcgggcagaaaggagaag
gaacgtggtgaacttcaggtaacagtccagttcactcgcaacaacatgacagccagcatg
ttcgacctcaccataaaggacaagccccgctctgcttttggcaagctcaaggatcgcgtc
acagggaggaagaggggggacgtggagtcttcctcagccatcgtgccaggccgcttcgcc
gccctgtcaggatcccttgggcagccatttggagatgagatgggcggaggtgagtctcca
gatgtggagatagcagaggaaaagaggagcaagatgaaagattttttcaaagggaggctg
cgcaagtcgtctgacaccaggtcatgctcgtcgctggcttcagagagtagcgtgtcgtcc
atggtcagtgataaccccggccctccgcccagcctggatctgatgtcggaccctcccagc
tctcccatctacacgagcaaagtgagagtggacacccattacggagagacagctttagct
aaacaagtgctcaccagccagcacaccactaaggttctcacacacaagcgagccttcagc
gatgaggccagtaagatcacgaccgccttccctcgatcaaatctagcagtggagtctctg
aagggtcagaccatgacgcagtccaagtcttccttgtgtataaatggcagccacgtctac
gactccgagccatcgactccaaagagctcaggagctcaccagtccaagctggtgctgctg
gagaaatgctccccgctgtctcgttccctgcagaacctcaccaagagaagcgaggacaaa
ggttcctttgccgatggccgacgctggtcctttgacaagataaagaaagaggataaagag
gacgaaaaggaagctcaggcctcgtccctccaaattcagcaagctcagatggggggtcgc
gctgcgcaggcagatatgccggccgtctcttctactgttgtttcccctgacaaagggagg
aagctaagaaagacgttattctctggtggaaggagtgattccctcccagctaagtcagac
ctgaaccaggctggttcgacatctgaggggaggctcagaggctggtttggctccggtgat
tcccagaccaagccaaggctggaagtttctcctaaggtagaaagcagctcagacgtaccc
cctcccctccctcctcgctcccctgtaccccctcagtgctcctctccctctgcctccccc
tccgatcatgtctcacctgatgactgcaatcacaccaaccccttcaccccctcttcctct
ccctcctcaacccccatctccccctctaaccctttcccctctcgtatgcaacgcaacccc
tttttcgaggatctcatagcagaggagtcacagaggtctcctacttttgcgcctggctcc
tcatccagctcatctccctttcattacactactctgccctcccaaacctgcacacccagc
cctgcttgtgaagctaaagctacaaatatggcttacataaagcgggagcgccccaggcca
gtagctaggcagatatctctccctgcattattacccaaatcagccacaccaaactcctcc
gcccctcgctccatgtcagagagtgcgggagaaatggatgactcgtttgatgctttcgcc
tccagcaggctctactcacctaaagggaatcttcctcagaaacagctgagaaccagtcca
acgccatctcacagacatagttatcttccagttaataacaacaccaataatcacgcacaa
gagctgcaaacatgtgaagagaagcctccacctttgcctccaaggagacctttaagaact
tcagtgaatgagatttactctgatggctggctgcacagaggtcaagagctggctgtccat
aaagaagcctacctcctctcgcagaccggcgtggcctcgctgcaacgtggaagagaagca
gaaggcaaaagaaacagcgtatctccagaccctcacaccagcagcgagacctccgactcc
ctcagcgttaactctcagacatacgcaaacgttagtccgtcaggattcacgtctgaagag
aagctcaaaaagttcaaatatgaacctttggaagatgaaaccgaccgctggggagggatg
ttgtttgagcaagacttgtatggacgacggatgtgcagaggaaactacggacaacccaac
gtaaatcgtttatcgttgaatgctgaagaaactcctggaaataagatgacatctgtgaac
tcaggacctaaaatacttcttgatagtgacatatctgttacagaccttttggacatgtca
tctacttcctcacagccagttgcaaaagtacaagatattacaaccgctccagcagaggag
tctaatccagctgaaaccacctgcatcaacaataatgtctcttcctcactaactttagga
gatatgaacatgaatgtgaataattcagattttggttttatcgattcagatggctcttct
cagtcagaggtagttgatactctcaaaggcatcaagagttttggcgggacttttccacaa
ccgccagaagcttcacagatagctgcttaccatatagagacggtgaccatagctgaggat
ttgttcactttgaaggacacctacatccctgagatgaactcgtcctttgaaataactgca
tcatctagcaaactgtataaagtctcttcagtgtgccaagacaattgctacgatctgaat
aacatggcatcacatgataactccagggtgaacagcagagacatcgctgctttgtcgtta
caaaatcaagcacctaatgcggacggttttaaaactgaatccagagaagttacatcaaga
agtttggcggattttaaaaagacgaaaaaggagtttgatgataacggaaaccctcaagct
aaaacaggcgctcttaacccgaaagagccgtttcccggggtggttagtgcacgttttaga
ccaaaagggttgtcccgacagaacagctgcggcagcccaagcaaccaaagcaaaagtgga
gatcgagagttcgaacagttcttgtccctcgttcaaaacatttcccaagtcagtgaagga
ccgttgtcatatcagccctctaaatcagctctttcttcgttaatggcattagtagatcaa
aacgagtctaatacgacatcacaactatgttcaaaagacgacacaacagtgacaggaaaa
tcctctgacattagttttgaagaccttcacgctaaagtagcaccaaactctagaacccct
tcaaagtcaaagattgggcaatctttgcaagaaccctcttgtccgtccnntgtcccgcgt
acactctccctgtcagctgacgcacaggctacgctccaccctacccctgtctgttgcccc
tccatacatccctcaagcatggggctcgatgccggagccaacactactctggctgtcgca
ccctacacctcctcctcctcctactcctctaccacctccaccactgaccagcccctggtc
gatgcacggcactcacttttgcctgaggagactcagccagctagcaacctgccccatcag
gagagcagaactcatccagtgaagccgttgacctccagccaatcagagaagaaggagggt
cgttcggttctggagaagctgaagtctaccatccaccctggacgcatggcccaccacgct
gcagcagaacctgagaggactcaggaggtgacggtggacaactcggcccattaccagcat
ctgaccaacatggagctgatctccctgctgctgcagcaggagatggacatgcaaaagcag
gacacgacctccgagcggcaggcggcgcagctgcataaatgtgaggctgagctgaaaaag
gtcaagttacaggttcgagacctggaggactacattgataatcttttactgcggatcata
gagcagacacccacgctgctgcaagtgcgcactagacacaagtga
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integrated database retrieval system
