Cottoperca gobio: 115015394
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Entry
115015394 CDS
T07513
Symbol
rfx1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgob03000
]
115015394 (rfx1)
Transcription factors [BR:
cgob03000
]
Eukaryotic type
Other basic domains
RF-X
115015394 (rfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
115015394
NCBI-ProteinID:
XP_029298508
Ensembl:
ENSCGOG00000001533
UniProt:
A0A6J2QJD8
LinkDB
All DBs
Position
1:17457662..17469005
Genome browser
AA seq
844 aa
AA seq
DB search
MATSGYSEDLQPQQANSVTIATPAATTPSSAKTAHFLSELPPTSGTVSPANRSATASKTG
QDALCSQAPPTGQNQKPVVLTTPTQHYGTPEIQHSAVQKSNGQSNSPQYIIVTVTEGSVH
SNDSLSDSSPPASGVPTQVVQPVQNTQQRSVLQVVSQAAKRIQSGHINNLQSVHINQEVE
HVYSGQVQYVDGGGDATFATSSIRSSNYPFSDSPLYSQTPPTSSSYYETTPTSESDITGS
VTPQPVSVATAGANSGVVASGGGGYVIQGGYVLGGGAAAGGGGGGGGGQSYSSPNSRAPP
ATVQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRL
GTRGNSKYHYYGLRIKSGSPLLRLMDEQQHMALRQQPFSQKNRMKPLQKAQGITNGTSGG
MGQQAAALCDISAQVQQYQQFLEASRPLPDFVDIDLQDRTLPDGILSEHLKAFQTLYREH
CEAILDVMVNLQFTLVETLWKSFWRFSQSTDTESLNLHNESEKRLPKSCLVVLCKYEPVL
RWTKECDNLLYQTLVEILIPDVLRPIPSALTQAIRNFAKSLENWLTGAMMNIPEEMVRIK
VVCVGSFSQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFTNVQEQASWVCQCE
DRVVQRLEQDFKMTLQQQNSLEQWATWLDGVVTEALKPYEHNTAALPKAAKVFLLNWSFY
SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGVTPIAVMGEFASTVKSR
ISPDLEKEEEEDEEDEESEDEGGDLVLQSTSLSAMDDEKDPMEPPAKLPRTTFNLHTLTD
STQP
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttctggatactcggaggaccttcagcctcagcaggccaacagtgtaaccata
gcaacacctgctgccaccacaccctcatccgcaaagacagcacacttcctgtccgaactc
ccaccgacctctggaaccgtttcaccggctaaccgatcagccactgcctcaaaaacagga
caggatgcactttgttctcaagcgccgcccaccggccagaaccagaagccagtggttctg
acgactcccacgcaacactatgggaccccagaaatccaacactctgcggtccagaaaagt
aatggtcagagcaactctccccagtacatcatagtgactgttacagagggctctgttcac
tccaatgacagcctgtcggactccagcccgcctgcctctggtgttcccactcaggtggtc
caaccagtgcagaacacccaacagaggtcagtgttgcaagtggtgtcgcaggcagccaag
aggattcagtccggccacatcaacaacctgcagtctgtgcacattaaccaggaggtggag
catgtgtactctggtcaggtgcagtatgtggacggaggaggagacgccacttttgccaca
tcctccattcgatcgagcaactaccctttctccgactcgcccctttactcccagacccct
cccacctcctcctcctactatgagaccacgcccacctctgagtcagacatcaccggctct
gtgaccccgcagcccgtttctgtggcaacagcgggagccaatagcggggtagttgcctcg
ggcggagggggctatgtcattcagggaggttacgtgttaggaggaggagcagcagcaggt
ggaggaggaggaggaggaggaggacagagttactccagccctaattctcgtgccccaccc
gctactgtgcagtggctgtgtgataactacgagggggcggagggggtgagtttacctcgc
tgcaccctctactaccactacctgctgcactgccaggagcagaagctagaacctgttaat
gctgcatccttcggcaaactcatcaggtccgtcttcatggggctacgtacgaggagatta
gggaccagagggaactcaaagtaccactactacggtctgaggatcaaatctggttccccg
ctgctcagactgatggatgaacaacagcacatggcgttgaggcagcagcctttctcacag
aaaaacaggatgaagccacttcagaaggcacagggcatcaccaatgggacatcaggtggg
atgggtcagcaggcggcggcgctttgtgatatttcggcacaggtgcaacagtatcagcag
tttctggaggcatcaaggccgctgccagactttgtggacattgatctacaagatcgaacc
ctgcctgacgggatcctctcagaacacctcaaggcctttcagactctctacagagaacac
tgtgaggccattctggacgtgatggtcaaccttcagttcactctcgtagagacactgtgg
aaatccttctggaggttcagccagagcacagacaccgaatcactcaacctgcacaatgag
tctgagaagcgtctgcccaaatcgtgcctggtggtgctgtgtaagtatgagcccgtgctg
cgctggacgaaagagtgcgacaacctgctctaccagactctggtggagatcctcatccct
gatgtactgagacccatccctagtgccttaactcaggccatccgcaactttgccaagagt
ctggagaactggttgacaggcgccatgatgaacatcccagaagagatggttcgcataaag
gtggtgtgtgtgggctccttctcccagacgctgcgccgctacaccagcctgaaccacctg
gcccaggcagcccgtgccgtcctccagaacacagcccagatcaaccagatgctctcggac
ctcaacagggtggattttactaacgtacaggagcaggcatcctgggtatgtcagtgtgaa
gaccgggtggttcagcggctggagcaagattttaaaatgactctgcagcagcagaactct
ctggagcagtgggccacctggctggatggagtcgtcaccgaggccctgaagccctacgag
cacaacacagccgctctaccaaaggctgccaaggtcttcctgctcaactggtccttctat
agctcgatggtcatccgggacctgactctccgcagtgctgccagctttggctcctttcac
ctgatccgcttgctgtatgatgagtacatgtactacctgatcgaacacagggtggcccag
gctaaaggagtgacacccatcgcggtcatgggagaatttgccagcactgtcaagagccga
atctctccggacctggagaaagaagaagaagaggacgaggaggacgaggagagcgaggac
gagggcggagatctcgtgctgcagtccacctctctgagtgcgatggacgacgagaaggac
ccgatggagccgcccgccaagctgcccaggaccactttcaatctgcacactctgacggac
agcacacaaccttag
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